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KJC3_002057-T1, KJC3_002057-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002057-T1
Unique NameKJC3_002057-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1553211..1554256-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002057-T1 ID=KJC3_002057-T1|Name=KJC3_002057-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1046bp|location=Sequence derived from alignment at ch2:1553211..1554256- (Aspergillus niger KJC3)
CCCTCAAGACCCATTCGAACCACCAACCCCCCACAGTCCTCGCAGACACA
CGTCCGCTCCTCGCAAACCCATCACAATGTCTTCAATTGCTGCTATGGCC
TCCCGCCGGGCCTTCGCCCGCCAGTCCTTCCTTCGCGCTCCCCCGCGCCG
CTTCTACAGCTCCTCCAAGGTCGAGGAGGCTGGCCTGGACAAGGGCCCCA
AGCGTGACCCCGAGCTCTACGTACGGACCCAATGAACCGGAAGAAATCAA
TTGCGATCGTTCGAATCTAATTGGTGAAATTAAAATTGAACAGGTTCTGC
TCGGTGTCATGTCCGGTGCTTTCCTGCTTGCCGGATGGTGAATACTTTTC
CCTTTTCCCCGATTTCTTTTCATAGTGTGTCAGCACGACCAGCATACAAC
GCTCAATTGCCAAAAAAATTTCTCGGCACTACTACTATATTCAACAATTG
ATCGACTCAAATTAGCTAACACTGATTTTTTTTCCCCCGATGAACAGGTA
CTTCGGCAGAAAGCCCACCTCCGTCACCTCCGAGAGCAACGTCCGCATTG
GCGAGAGTGCCATGCCCTGGGAGCAGGCCGACGAGAGTGGCAAGGTCTAC
AAGTACCAATACCACCCCCACGGTGACAAGAGCCAGCCCCTGCGCAACGC
CCCCAGCGCCTTGAACACTGTCATTGTCCCCAACGTTACCCTGCCCGTGG
TATTTACTGCCCCAATCCCCCTGTGGTTGATATTCGCGACCAATATCCGT
CAATGCCGACTGAATCACTAACAAACGATTCCCTGTCTTTTTTAGGACCT
TCACGAGCGCTACAACAAGTACGGAAAGGAGGAGTGGGACTACTAAATAG
TTCCCCATCTGCAATTGCAGACAAGGCTGTGTTGTTGAAATTCTAGGAAG
AAAGAAGTTGAGGCAGGTCGGCGCTGATCGCTGTACACTAAAACTTGTGA
AGACTAGAGTATGGGGTGAGACCGTTCTTACAAGACCACTGTGCATAGTT
TGTTGTTTTGACGAGGTTTATTTGGAAGATTGTTTTCGTTGCGCTT
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Coding sequence (CDS) from alignment at ch2:1553211..1554256-

>KJC3_002057-T1 ID=KJC3_002057-T1|Name=KJC3_002057-T1|organism=Aspergillus niger KJC3|type=CDS|length=1764bp|location=Sequence derived from alignment at ch2:1553211..1554256- (Aspergillus niger KJC3)
GACCTTCACGAGCGCTACAACAAGTACGGAAAGGAGGAGTGGGACTACTA
AGTACTTCGGCAGAAAGCCCACCTCCGTCACCTCCGAGAGCAACGTCCGC
ATTGGCGAGAGTGCCATGCCCTGGGAGCAGGCCGACGAGAGTGGCAAGGT
CTACAAGTACCAATACCACCCCCACGGTGACAAGAGCCAGCCCCTGCGCA
ACGCCCCCAGCGCCTTGAACACTGTCATTGTCCCCAACGTTACCCTGCCC
GTGGTTCTGCTCGGTGTCATGTCCGGTGCTTTCCTGCTTGCCGGATGATG
TCTTCAATTGCTGCTATGGCCTCCCGCCGGGCCTTCGCCCGCCAGTCCTT
CCTTCGCGCTCCCCCGCGCCGCTTCTACAGCTCCTCCAAGGTCGAGGAGG
CTGGCCTGGACAAGGGCCCCAAGCGTGACCCCGAGCTCTACGACCTTCAC
GAGCGCTACAACAAGTACGGAAAGGAGGAGTGGGACTACTAAGTACTTCG
GCAGAAAGCCCACCTCCGTCACCTCCGAGAGCAACGTCCGCATTGGCGAG
AGTGCCATGCCCTGGGAGCAGGCCGACGAGAGTGGCAAGGTCTACAAGTA
CCAATACCACCCCCACGGTGACAAGAGCCAGCCCCTGCGCAACGCCCCCA
GCGCCTTGAACACTGTCATTGTCCCCAACGTTACCCTGCCCGTGGTTCTG
CTCGGTGTCATGTCCGGTGCTTTCCTGCTTGCCGGATGATGTCTTCAATT
GCTGCTATGGCCTCCCGCCGGGCCTTCGCCCGCCAGTCCTTCCTTCGCGC
TCCCCCGCGCCGCTTCTACAGCTCCTCCAAGGTCGAGGAGGCTGGCCTGG
ACAAGGGCCCCAAGCGTGACCCCGAGCTCTACGACCTTCACGAGCGCTAC
AACAAGTACGGAAAGGAGGAGTGGGACTACTAAGTACTTCGGCAGAAAGC
CCACCTCCGTCACCTCCGAGAGCAACGTCCGCATTGGCGAGAGTGCCATG
CCCTGGGAGCAGGCCGACGAGAGTGGCAAGGTCTACAAGTACCAATACCA
CCCCCACGGTGACAAGAGCCAGCCCCTGCGCAACGCCCCCAGCGCCTTGA
ACACTGTCATTGTCCCCAACGTTACCCTGCCCGTGGTTCTGCTCGGTGTC
ATGTCCGGTGCTTTCCTGCTTGCCGGATGATGTCTTCAATTGCTGCTATG
GCCTCCCGCCGGGCCTTCGCCCGCCAGTCCTTCCTTCGCGCTCCCCCGCG
CCGCTTCTACAGCTCCTCCAAGGTCGAGGAGGCTGGCCTGGACAAGGGCC
CCAAGCGTGACCCCGAGCTCTACGACCTTCACGAGCGCTACAACAAGTAC
GGAAAGGAGGAGTGGGACTACTAAGTACTTCGGCAGAAAGCCCACCTCCG
TCACCTCCGAGAGCAACGTCCGCATTGGCGAGAGTGCCATGCCCTGGGAG
CAGGCCGACGAGAGTGGCAAGGTCTACAAGTACCAATACCACCCCCACGG
TGACAAGAGCCAGCCCCTGCGCAACGCCCCCAGCGCCTTGAACACTGTCA
TTGTCCCCAACGTTACCCTGCCCGTGGTTCTGCTCGGTGTCATGTCCGGT
GCTTTCCTGCTTGCCGGATGATGTCTTCAATTGCTGCTATGGCCTCCCGC
CGGGCCTTCGCCCGCCAGTCCTTCCTTCGCGCTCCCCCGCGCCGCTTCTA
CAGCTCCTCCAAGGTCGAGGAGGCTGGCCTGGACAAGGGCCCCAAGCGTG
ACCCCGAGCTCTAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002057KJC3_002057Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002057-T1KJC3_002057-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002057-T1.cdsKJC3_002057-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002057-T1.utr3p1KJC3_002057-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002057-T1.exon4KJC3_002057-T1.exon4Aspergillus niger KJC3exon
KJC3_002057-T1.exon3KJC3_002057-T1.exon3Aspergillus niger KJC3exon
KJC3_002057-T1.exon2KJC3_002057-T1.exon2Aspergillus niger KJC3exon
KJC3_002057-T1.exon1KJC3_002057-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002057-T1.utr5p1KJC3_002057-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1553211..1554256 -
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