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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1554995..1556986+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002058-T1 ID=KJC3_002058-T1|Name=KJC3_002058-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1992bp|location=Sequence derived from alignment at ch2:1554995..1556986+ (Aspergillus niger KJC3)
ATGAGTAGAAATCTTCCATCCACACTCAACGACATGCCTCTATCTTCCGC
GATTTCGGAAACCAGCGACACGCCTGCCTCGGCGCCCCCGCAACATGTTC
TCGGTATCCCGCGACCCCCTTCTGTGGGAGGAATTTCGTCCCGAGTGACG
GACATGGCGTCAGATGACGGAGAACAGTCCCAGACATATACCGGAGTTTC
GTCGCATCCCCCGCAATCCCGAGCGTCGGCTCCTCGACGAGGACCGCCGC
CTGCCAGGAGCTCTATCACATCGACCAGTCAATGGACTAGGCCAGGGAGT
GCTAGTAGCAAGCAGAGCCGGTCACACATTCCTTCGCTCGCTGCGCAAGG
TTTCTTCCGTCCTATGTCTTCTCAGCGACTCCAGGCTCATCGAGGTCGGC
CTATGACAAAGGGGACCATGACCGACACGTCGGAGGAGTGGAACGACCAT
ACGAGTCAGAACAGGCAAAGCTTGATTTCAAATAGCACGATACCGCAAGG
GTCCATTCCTCCGACAGAGCAAGAAGCTCCTCCTTCGAGAGGCACAGAGT
TCACGGACCCTATCATCCCTGACCGCAACACCTCGAATGCTAGTCCTATC
GGTAACACCACGGGAAGGAGTCAGGGCGAGAGCGCCAAACTTCTCTACGA
CAGGGAGAGGGCTTATAAGATCCAACAACCTCATCTCAACCTTGGGGGAA
ATTATCATGGCTCGAATGAGCCTGTCAGCCCCCACCGGTCGACGCTTTCT
TTCCTCTCTCTGCAGAACAGGAATCAGGGACATGATAGTAGCCGTGACGT
ACGGGCACATGAGAGGCTTTCGTCGGCCGGCTCTACCCCTGGATCTATCG
AAAAGACCCCTCAGGCCGGTACAAGCAAAGGTCGTCTGGGCAAAAACTTC
GAATATTTCGTCGGCAACACCATTTTCTTCGGCGGAGGAAGGCTCCAGAA
CGCCAGGGATAAGCCCGTCAATATCGCTACAGCAATCTTCGTGCTTGTAC
CTACGGCTCTGTTCTTCGCTTATTCGTAAGTACTTCATCTCTCTCTCTTG
GTGAGATCGAGTCGCTAACGCTGCATAAGAGGTCCTTGGCTCTGGCACAA
TATCTCGCCCGCCCTTCCGATATTGTTTGCTTATCTCTTCTACTTATGCT
TCTCATCTTTTATACACGCTTCAGTCGTTGATCCTGGGGTAAGACATAGA
TCCATGCGAGACAATGCAGCGTCATTGCTAACAAGCCCGCTCCAGATTAT
TCCTCGCAATCTTCATCAGCTGCCACCTCCGGATCCCGCAGACGATCCGT
TGGCGATTGGCCCACCAACCAACGACTGGGTGATGGTGAAGCTGGCGACA
TCTGACGTTGCAGCCATGGATGTGCCTGTGAAGTACTGCAAGACCTGCTG
TATCTGGCGTCCTCCCCGCTGCTACCATTGCCGTGTATGCGACAATTGTG
TTGAGACGCTTGACCATCACTGCGTGTGGCTCAACAACTGCGTTGGCCGC
CGTAACTACCGGTACTTCTTCACCTTTGTGGCGTCCTCCACCCTCCTTGC
TCTGTTCTTGCTTGGTGCCAGTCTCGCGCATATCTTGGTGTATAAATCAC
GAGAGCATGTCAGCTTTGGCACAGCCATTGATAAATGGAGAGTTCCCTGG
GCTATGGTGATCTACGGTGCGGTTGCCGCACCATACCCGGCCTCTTTATG
GGCTTACCATCTCTTCCTGGTCGGTCGGGGCGAGACCACCCGAGAATATC
TGAACTCGCACAAGTTTGCGAAAGCTGACCGCCATCGGCCCTTCACTCAG
GGCAATGTCTTCCGGAACTGGTTGTCCGTTTTCCTGCGGCCGCGGCCTCC
CACGTATATGCAGTTCAAGCAGCCTTATCAGGAAGGGGACCAGCGCCTGA
GCACGATGAAGCGCAAGTATCTCCCTCGCAATATCGAGCCCCAGAACGAC
ATTGAGATGCAACAAGTGCCTCCCCCTTCTCAACCCCAATAG back to topCoding sequence (CDS) from alignment at ch2:1554995..1556986+ >KJC3_002058-T1 ID=KJC3_002058-T1|Name=KJC3_002058-T1|organism=Aspergillus niger KJC3|type=CDS|length=5643bp|location=Sequence derived from alignment at ch2:1554995..1556986+ (Aspergillus niger KJC3)
ATGAGTAGAAATCTTCCATCCACACTCAACGACATGCCTCTATCTTCCGC
GATTTCGGAAACCAGCGACACGCCTGCCTCGGCGCCCCCGCAACATGTTC
TCGGTATCCCGCGACCCCCTTCTGTGGGAGGAATTTCGTCCCGAGTGACG
GACATGGCGTCAGATGACGGAGAACAGTCCCAGACATATACCGGAGTTTC
GTCGCATCCCCCGCAATCCCGAGCGTCGGCTCCTCGACGAGGACCGCCGC
CTGCCAGGAGCTCTATCACATCGACCAGTCAATGGACTAGGCCAGGGAGT
GCTAGTAGCAAGCAGAGCCGGTCACACATTCCTTCGCTCGCTGCGCAAGG
TTTCTTCCGTCCTATGTCTTCTCAGCGACTCCAGGCTCATCGAGGTCGGC
CTATGACAAAGGGGACCATGACCGACACGTCGGAGGAGTGGAACGACCAT
ACGAGTCAGAACAGGCAAAGCTTGATTTCAAATAGCACGATACCGCAAGG
GTCCATTCCTCCGACAGAGCAAGAAGCTCCTCCTTCGAGAGGCACAGAGT
TCACGGACCCTATCATCCCTGACCGCAACACCTCGAATGCTAGTCCTATC
GGTAACACCACGGGAAGGAGTCAGGGCGAGAGCGCCAAACTTCTCTACGA
CAGGGAGAGGGCTTATAAGATCCAACAACCTCATCTCAACCTTGGGGGAA
ATTATCATGGCTCGAATGAGCCTGTCAGCCCCCACCGGTCGACGCTTTCT
TTCCTCTCTCTGCAGAACAGGAATCAGGGACATGATAGTAGCCGTGACGT
ACGGGCACATGAGAGGCTTTCGTCGGCCGGCTCTACCCCTGGATCTATCG
AAAAGACCCCTCAGGCCGGTACAAGCAAAGGTCGTCTGGGCAAAAACTTC
GAATATTTCGTCGGCAACACCATTTTCTTCGGCGGAGGAAGGCTCCAGAA
CGCCAGGGATAAGCCCGTCAATATCGCTACAGCAATCTTCGTGCTTGTAC
CTACGGCTCTGTTCTTCGCTTATTCAGGTCCTTGGCTCTGGCACAATATC
TCGCCCGCCCTTCCGATATTGTTTGCTTATCTCTTCTACTTATGCTTCTC
ATCTTTTATACACGCTTCAGTCGTTGATCCTGGGATTATTCCTCGCAATC
TTCATCAGCTGCCACCTCCGGATCCCGCAGACGATCCGTTGGCGATTGGC
CCACCAACCAACGACTGGGTGATGGTGAAGCTGGCGACATCTGACGTTGC
AGCCATGGATGTGCCTGTGAAGTACTGCAAGACCTGCTGTATCTGGCGTC
CTCCCCGCTGCTACCATTGCCGTGTATGCGACAATTGTGTTGAGACGCTT
GACCATCACTGCGTGTGGCTCAACAACTGCGTTGGCCGCCGTAACTACCG
GTACTTCTTCACCTTTGTGGCGTCCTCCACCCTCCTTGCTCTGTTCTTGC
TTGGTGCCAGTCTCGCGCATATCTTGGTGTATAAATCACGAGAGCATGTC
AGCTTTGGCACAGCCATTGATAAATGGAGAGTTCCCTGGGCTATGGTGAT
CTACGGTGCGGTTGCCGCACCATACCCGGCCTCTTTATGGGCTTACCATC
TCTTCCTGGTCGGTCGGGGCGAGACCACCCGAGAATATCTGAACTCGCAC
AAGTTTGCGAAAGCTGACCGCCATCGGCCCTTCACTCAGGGCAATGTCTT
CCGGAACTGGTTGTCCGTTTTCCTGCGGCCGCGGCCTCCCACGTATATGC
AGTTCAAGCAGCCTTATCAGGAAGGGGACCAGCGCCTGAGCACGATGAAG
CGCAAGTATCTCCCTCGCAATATCGAGCCCCAGAACGACATTGAGATGCA
ACAAGTGCCTCCCCCTTCTCAACCCCAATAGATGAGTAGAAATCTTCCAT
CCACACTCAACGACATGCCTCTATCTTCCGCGATTTCGGAAACCAGCGAC
ACGCCTGCCTCGGCGCCCCCGCAACATGTTCTCGGTATCCCGCGACCCCC
TTCTGTGGGAGGAATTTCGTCCCGAGTGACGGACATGGCGTCAGATGACG
GAGAACAGTCCCAGACATATACCGGAGTTTCGTCGCATCCCCCGCAATCC
CGAGCGTCGGCTCCTCGACGAGGACCGCCGCCTGCCAGGAGCTCTATCAC
ATCGACCAGTCAATGGACTAGGCCAGGGAGTGCTAGTAGCAAGCAGAGCC
GGTCACACATTCCTTCGCTCGCTGCGCAAGGTTTCTTCCGTCCTATGTCT
TCTCAGCGACTCCAGGCTCATCGAGGTCGGCCTATGACAAAGGGGACCAT
GACCGACACGTCGGAGGAGTGGAACGACCATACGAGTCAGAACAGGCAAA
GCTTGATTTCAAATAGCACGATACCGCAAGGGTCCATTCCTCCGACAGAG
CAAGAAGCTCCTCCTTCGAGAGGCACAGAGTTCACGGACCCTATCATCCC
TGACCGCAACACCTCGAATGCTAGTCCTATCGGTAACACCACGGGAAGGA
GTCAGGGCGAGAGCGCCAAACTTCTCTACGACAGGGAGAGGGCTTATAAG
ATCCAACAACCTCATCTCAACCTTGGGGGAAATTATCATGGCTCGAATGA
GCCTGTCAGCCCCCACCGGTCGACGCTTTCTTTCCTCTCTCTGCAGAACA
GGAATCAGGGACATGATAGTAGCCGTGACGTACGGGCACATGAGAGGCTT
TCGTCGGCCGGCTCTACCCCTGGATCTATCGAAAAGACCCCTCAGGCCGG
TACAAGCAAAGGTCGTCTGGGCAAAAACTTCGAATATTTCGTCGGCAACA
CCATTTTCTTCGGCGGAGGAAGGCTCCAGAACGCCAGGGATAAGCCCGTC
AATATCGCTACAGCAATCTTCGTGCTTGTACCTACGGCTCTGTTCTTCGC
TTATTCAGGTCCTTGGCTCTGGCACAATATCTCGCCCGCCCTTCCGATAT
TGTTTGCTTATCTCTTCTACTTATGCTTCTCATCTTTTATACACGCTTCA
GTCGTTGATCCTGGGATTATTCCTCGCAATCTTCATCAGCTGCCACCTCC
GGATCCCGCAGACGATCCGTTGGCGATTGGCCCACCAACCAACGACTGGG
TGATGGTGAAGCTGGCGACATCTGACGTTGCAGCCATGGATGTGCCTGTG
AAGTACTGCAAGACCTGCTGTATCTGGCGTCCTCCCCGCTGCTACCATTG
CCGTGTATGCGACAATTGTGTTGAGACGCTTGACCATCACTGCGTGTGGC
TCAACAACTGCGTTGGCCGCCGTAACTACCGGTACTTCTTCACCTTTGTG
GCGTCCTCCACCCTCCTTGCTCTGTTCTTGCTTGGTGCCAGTCTCGCGCA
TATCTTGGTGTATAAATCACGAGAGCATGTCAGCTTTGGCACAGCCATTG
ATAAATGGAGAGTTCCCTGGGCTATGGTGATCTACGGTGCGGTTGCCGCA
CCATACCCGGCCTCTTTATGGGCTTACCATCTCTTCCTGGTCGGTCGGGG
CGAGACCACCCGAGAATATCTGAACTCGCACAAGTTTGCGAAAGCTGACC
GCCATCGGCCCTTCACTCAGGGCAATGTCTTCCGGAACTGGTTGTCCGTT
TTCCTGCGGCCGCGGCCTCCCACGTATATGCAGTTCAAGCAGCCTTATCA
GGAAGGGGACCAGCGCCTGAGCACGATGAAGCGCAAGTATCTCCCTCGCA
ATATCGAGCCCCAGAACGACATTGAGATGCAACAAGTGCCTCCCCCTTCT
CAACCCCAATAGATGAGTAGAAATCTTCCATCCACACTCAACGACATGCC
TCTATCTTCCGCGATTTCGGAAACCAGCGACACGCCTGCCTCGGCGCCCC
CGCAACATGTTCTCGGTATCCCGCGACCCCCTTCTGTGGGAGGAATTTCG
TCCCGAGTGACGGACATGGCGTCAGATGACGGAGAACAGTCCCAGACATA
TACCGGAGTTTCGTCGCATCCCCCGCAATCCCGAGCGTCGGCTCCTCGAC
GAGGACCGCCGCCTGCCAGGAGCTCTATCACATCGACCAGTCAATGGACT
AGGCCAGGGAGTGCTAGTAGCAAGCAGAGCCGGTCACACATTCCTTCGCT
CGCTGCGCAAGGTTTCTTCCGTCCTATGTCTTCTCAGCGACTCCAGGCTC
ATCGAGGTCGGCCTATGACAAAGGGGACCATGACCGACACGTCGGAGGAG
TGGAACGACCATACGAGTCAGAACAGGCAAAGCTTGATTTCAAATAGCAC
GATACCGCAAGGGTCCATTCCTCCGACAGAGCAAGAAGCTCCTCCTTCGA
GAGGCACAGAGTTCACGGACCCTATCATCCCTGACCGCAACACCTCGAAT
GCTAGTCCTATCGGTAACACCACGGGAAGGAGTCAGGGCGAGAGCGCCAA
ACTTCTCTACGACAGGGAGAGGGCTTATAAGATCCAACAACCTCATCTCA
ACCTTGGGGGAAATTATCATGGCTCGAATGAGCCTGTCAGCCCCCACCGG
TCGACGCTTTCTTTCCTCTCTCTGCAGAACAGGAATCAGGGACATGATAG
TAGCCGTGACGTACGGGCACATGAGAGGCTTTCGTCGGCCGGCTCTACCC
CTGGATCTATCGAAAAGACCCCTCAGGCCGGTACAAGCAAAGGTCGTCTG
GGCAAAAACTTCGAATATTTCGTCGGCAACACCATTTTCTTCGGCGGAGG
AAGGCTCCAGAACGCCAGGGATAAGCCCGTCAATATCGCTACAGCAATCT
TCGTGCTTGTACCTACGGCTCTGTTCTTCGCTTATTCAGGTCCTTGGCTC
TGGCACAATATCTCGCCCGCCCTTCCGATATTGTTTGCTTATCTCTTCTA
CTTATGCTTCTCATCTTTTATACACGCTTCAGTCGTTGATCCTGGGATTA
TTCCTCGCAATCTTCATCAGCTGCCACCTCCGGATCCCGCAGACGATCCG
TTGGCGATTGGCCCACCAACCAACGACTGGGTGATGGTGAAGCTGGCGAC
ATCTGACGTTGCAGCCATGGATGTGCCTGTGAAGTACTGCAAGACCTGCT
GTATCTGGCGTCCTCCCCGCTGCTACCATTGCCGTGTATGCGACAATTGT
GTTGAGACGCTTGACCATCACTGCGTGTGGCTCAACAACTGCGTTGGCCG
CCGTAACTACCGGTACTTCTTCACCTTTGTGGCGTCCTCCACCCTCCTTG
CTCTGTTCTTGCTTGGTGCCAGTCTCGCGCATATCTTGGTGTATAAATCA
CGAGAGCATGTCAGCTTTGGCACAGCCATTGATAAATGGAGAGTTCCCTG
GGCTATGGTGATCTACGGTGCGGTTGCCGCACCATACCCGGCCTCTTTAT
GGGCTTACCATCTCTTCCTGGTCGGTCGGGGCGAGACCACCCGAGAATAT
CTGAACTCGCACAAGTTTGCGAAAGCTGACCGCCATCGGCCCTTCACTCA
GGGCAATGTCTTCCGGAACTGGTTGTCCGTTTTCCTGCGGCCGCGGCCTC
CCACGTATATGCAGTTCAAGCAGCCTTATCAGGAAGGGGACCAGCGCCTG
AGCACGATGAAGCGCAAGTATCTCCCTCGCAATATCGAGCCCCAGAACGA
CATTGAGATGCAACAAGTGCCTCCCCCTTCTCAACCCCAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016409 | palmitoyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264FYY |
| DBxref | InterPro:IPR001594 |
| DBxref | PFAM:PF01529 |
| Product | Eukaryotic peptide chain release factor GTP-binding subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1554995..1556986 + |
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