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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1569422..1574261+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002063-T1 ID=KJC3_002063-T1|Name=KJC3_002063-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4840bp|location=Sequence derived from alignment at ch2:1569422..1574261+ (Aspergillus niger KJC3)
TGCCCCCTCTGCCTCTTTCCTTTCTTTCACCCTCGGATGGTTCTCTTAAC
CATCTCACATATCCTTCTAGACTGCCCTTCAGGCCATGGACAAAATAGGA
GGATACTATTATTATCCCGCCCACCAGCCGTCCAGGTCCTCATATGATGC
TACCCGCTTAATCTATTCCCGTATCCCGACTATTGTGCTTTTAATCTCCG
GGACTCACTCACTAAACCGCAACGAGTTTTCTTCCCGACGGACAATTAAG
ACGGGTTCTACGATCTAAGAGTGCTAGTTGGCAACGGCGCAGCTGCTGGT
CACTACGGATGTCCGTCCTTCAATTCCGAGAGTCGAAGAGAGAGAAAAAT
GTGCAATTGGAAAGGGCGCCATCGCCAGCCTGATTGAGTTTGCTCGCTTC
GTCACTATCACCAATCTATAACGGTCGTGAGACTCGGTTAGTTTGAAGGC
GCTGATATGTAGTGGAGCTATCCGAGCCAGGATCAAATGCGACTCGCGGA
TGGTCTGCGCTGAATGACCAGGCCTCGCTCGCTTGCTGAGCTCGTTTATT
GGTCGCTGCACACGGGAGGAGCTTCGTCGACCGTTTCATATTGAAATCTC
AGGGCCGCAGAGGAGTGGTACTCCTGTTCAAGGTGAGACCTAGTCCATCC
ACCATCCTCTTGGTCGTCCCGTTCCTGACCAATGGCCTTGCGCTCAGTCA
AGGTCGGGTCCTGACCCGCCAGCTTTTAGCTTCTCCGGTTATTCAGTATC
CTCATTTTCGAGCCAATCTACGGCCCTCGCCTACCCTGTCCCTCTTCTGT
AGCATGGCATTGCGATTCATGGGACTCCGCTTGCCGTCTGCATGCAGACT
CCGTACACTGGAATGGCGATGGAAAACCAGGGAATTGTCATGCATATGAG
GTTGGTAGGCCGTGATAGGGGAATGCTATTCGTCACATTGACTGTCGCCC
AAACGAAGAGGCTTCAGCTCAGGATGTCTGGCTGGTCAACCACCTCTTAA
ATGCATTGTTTACGTGGGAGGCTGGGTTTCGCGCGCCGAGTCTCTTAATA
GTAGCCAGCATTATCACAAACGGCTTTCCGTGCCTGTCCCCGCGCTATTG
GCGCTGGATCAACTCCACTTGCGACTGAACTGGTCCGACTCTAAAACGTC
TGCGCCCTTATCCGGTCCTAATGCCTGCGCATAGGACGGAAATGAAGCAC
TTTAATATCAACGTCTGACTTTTGGTTCGCCGGGTGCTGGAAAACCCTTG
GCCTTGCTTTCCCAACCGTGTGAGGCGTTATCGCCCAAAGGACTGAGTCT
GAGTCTGTTTTGACGCGACACTGGGGTTGTTCTCTTTCTTTCTGCTTTCC
AGTCGTTCGCTCCTTTCCCCAAAGTAAGGGCTAGAAGCTCTTTCTTTCTA
TTCTCCCTGTCATTCTTTTTTCTGTTTTATGACTCCGTAAGTCCGAAAAC
ATTGCTTTTCCCCAGTGGTCCGGTGTAACTAACAAGTGTCTAACTATGCG
CTCAGGGGTTTCACGGACAGCCAAAGCTTTCGCTGAGACTTTGGGGGGTC
TGATATTATACTTCCTTGACCTGGGTCAATCTTCCTTCATTCTTCTTTTG
AACAAAAGAGCCCTTTTATTTCTCCTGTGCGGTATGCAAGCTTCTGATCT
GACATTCTACGATGTCTGAGATTGTAGCATCGACTTACTCATTCCCTCCA
GAGGCATTGAGTGCCATTGCAACTCTTGTTGTCAACCACTTCCCTTTGAT
TGAATTCTGAGCCCATTGCTTTAAGCCTAGACTGTTGCACGGTGTCCGAC
AGTTTCAAACAATTGGCTTATCTCGGATTTTTTTTTCTATCTTCCTGCAT
CTGCTTTTGACTTTCGTCTCATACCCAGTCGAGCTGGATTTCGCTCATCG
ACCAGCTCTTTGGTGTCGAAGAAAAGATATCTCCACTACCAAAAGTTGTA
CCGACTCCCATCCTATGCGCTGGCCGGCCTTACTCCCGTATTGTGCAAAA
GTATCCCATGACTGCTAGAAGCTCTACAACCTAGCACTGTTATCACATGG
ATCCTCAAGCTGAAAAGACAGGCTCCGGGCCCCAGCAAGATGGGGACGTT
GCGCGAAAAGGATCAGTCAAGCGAGCGCGGGAGATGCTTCAGGCTGGAAA
GCGTCCTGAGAGAGCGCCAGAGGAACCAGCGCCTTCATTTCGCATCAATC
CAGCCCATATGACACAATGGCCTCTGCCCGACAACGCCCCTCTGCCGCCG
AATATGGCCAACCCTCAAGCAACCTTGGTCGTTCCGAAAGGGCCTCCGCC
AGTGCGCCCACCTCGTCCGGATTGCCCGTCCCCTTCCGTCTACTCGGAGA
GAAGCATGTCCGACGTCCCACCAGCACCTAGCCCGTTGAACATCAAACGT
CCAGTCCCCTCCTTTTCCCAGCCATTCCCAATCCCGCCAGGCCCGCGTCC
CGCCATCAGGATCCCCATCCCTCGGCCGCCTAGCCCAGACAGTGTTGCAG
GTTCAACACCTCGCGTTTCCGTCGCCACAGACGACCTCTTTCGACAGTCG
GGAGTTTCCACTGTCTCGTCGATCACCGAACTTCCCTCAGTTCCTCATCC
GCTTCCCCCACAGCAGCGTGTTGCGCCAGGAGCCGCTCCGAAAAAGACCG
CTAGCCTCGCTCCTCCAGTGCCTGTGGCGCGACCGGGAGGAAACCGCGCC
TCATCTGTTTCGCCTATTCCAGAGGAGTTACCCGACAGCCCAACCATTTC
GCAAGATCAATACGGCTCTGCACAGCCGTATCCACCTAGCTGGTACTCAG
GACAGGCAGAATCGGAAATCTTGGGGACGTATCTAGACGGCGAATCTGAC
GATGATGTGTCTAGACATTCTACTCACCAAGCCGGAGTAGCTACGGCTAC
GCTTCTCAGGCAAGCCAGCGTCGGGACTAGAGGAAAACCTTCCTTACGCA
CAATTCAAAAATCGAATGCTAGCTCGCCAGTACCGCCCTCAGAGAGGACC
CCTGTGTCTGCCAGACCGACTACGTCCGGGACTACGGGCACGGAGTTTAT
ACTGAAAGAAATATCTATAGGGCCTGATCGGAGAGATTCTATGTCGTCCA
GCTCAACTGGGTCTGCGCACTTCAACCTGGAGAAAGCACCAATCGTCTTG
GATCTCAGCACTCAACATCCTGCCTTGGCTCGTCCATACGTTGACAATGG
AGGTTTGGAAAAGGAGGTCGGAGCCCTTCCCAGGGCTGCGCCAACAATGA
GCGACAAACGACCAGGTGGCCGCCGGCCTCCGCGTCTCAACATGAGTGCT
GTTCGTGACGCAGAGGCTCGAGGGAGCCTTACGAGTTTGCCCGACCTCAT
TCGACGTGCGACAAGACTTGCATCGAATCTAGAGCATGGCCGGACTGCGA
GTCGAAACGATCTACTGAATGGCGGTGGTGGTTCCAGGTTCCAATGTAAG
TTTGACCATGGGTGCCATTATCAGTTCAGCGACAACGGCTAATCAGTGTT
TACAGATGACGCCAAACGCAAGTCAGGATCAATCAAGAGCATTTTGGCCT
CGTTTCCCCCGCCTGCTGCGACCCCCGAAGGCGGTCACTCGTCTTGGCCT
TTCTTCTTCAGAAGGTCCACACTGCATCAGATACACTCCAATGAACCACC
GCGAGCAGATGGAGATCAAGAGAAGGCTGCACCAAAACAACCGCGCCGAT
GCTGCGGGCTGCCACCATGGCTGTTTGCTCTTATTTGCGTCGTGATCATC
ATTGTCATCCTGGCCGCCATCCTCATCCCCGTTGGTCTGCTCGTGGTGCG
CCATAAGTCGAGTGGTACGAGCTGCGCAAAGACCAACCCATGTGAAAACG
GTGGCGTCAGTGTCTCGAGCGGCAGCGTTTGCTCCTGCGTTTGCGCCAAC
GGCTATACCGGATCTCGCTGTACGATCTCTGGTGATGCCAGCTGCGTCAC
AACTGAAGTCGATGGTAAGAACGCCACCATGGGCAGCGAGCTTCCTCGTC
TCTTTGAGTACGCGCAGCAAAACTACAGTATCCCTCTTGATGCTGTGACG
ATCATGGCCCTATTCAGCCAGAGCAATGTGTCCTGCACGACGGAAAACAC
CCTTATTTCGTTCTCTAGCGTATCAACAAGCAGCAGCAAAGCCCGCCGTG
CTCTGTCTGACCCGTCCCTGGGGGAGCCCTCAATCTCCGATCACCTGCTA
GCCAACCTCGAGCACCATCCCAGCCAAGCTTTAACAGAACGTACTCCCAC
GCAAGCTCTTGCAGCCCGCGACTCTGTCGCTACAGCGCACGGCATCGTCT
TTGATGGTGACCCACCAAGTAGCACAGGAACGGCAACCGCAACAGCAACC
AAAACAAGCCAAGAGTCCTCAGCCACGCAAACTTCAACGTCTAGTTCAAG
TACGACGACGACCACTACTTCTTCGTCCTCCAATTCGACAACCGTCACAT
CAGAAGTCCTTGATTTTGCCCGTGTCGCTATTCTCTACATCCTGGAAGAA
ACTGGTACCCTCTCCGCAGCCGAGTTCTCAGAAAGCAATATCCAATCCTA
CCTTTCTGATGACTACTCGGACGCGAAGAGCCACAGCTTCACCGTCGACC
TCACTCCCTCCGGCGTGATAGGCAATTACACTTTGAACTTTGACGACTTC
GAGATAACATTACCCAGTGGAAGTGTTGTTGGCGGTGACTAGGATACCAT
TTTCTTGTGCAGGGGGGCTGCGGTTGTATTTTTAATTTAATCTAGTATAT
ATTCCAGAATCTTGACTTGGCATTTGCGGCATTGTGATGGTAGCCTTGTA
CGTGTAAATAAACTCTGATTCCTTCCAACTTTAAGTGGCG back to topCoding sequence (CDS) from alignment at ch2:1569422..1574261+ >KJC3_002063-T1 ID=KJC3_002063-T1|Name=KJC3_002063-T1|organism=Aspergillus niger KJC3|type=CDS|length=5172bp|location=Sequence derived from alignment at ch2:1569422..1574261+ (Aspergillus niger KJC3)
ATGGATCCTCAAGCTGAAAAGACAGGCTCCGGGCCCCAGCAAGATGGGGA
CGTTGCGCGAAAAGGATCAGTCAAGCGAGCGCGGGAGATGCTTCAGGCTG
GAAAGCGTCCTGAGAGAGCGCCAGAGGAACCAGCGCCTTCATTTCGCATC
AATCCAGCCCATATGACACAATGGCCTCTGCCCGACAACGCCCCTCTGCC
GCCGAATATGGCCAACCCTCAAGCAACCTTGGTCGTTCCGAAAGGGCCTC
CGCCAGTGCGCCCACCTCGTCCGGATTGCCCGTCCCCTTCCGTCTACTCG
GAGAGAAGCATGTCCGACGTCCCACCAGCACCTAGCCCGTTGAACATCAA
ACGTCCAGTCCCCTCCTTTTCCCAGCCATTCCCAATCCCGCCAGGCCCGC
GTCCCGCCATCAGGATCCCCATCCCTCGGCCGCCTAGCCCAGACAGTGTT
GCAGGTTCAACACCTCGCGTTTCCGTCGCCACAGACGACCTCTTTCGACA
GTCGGGAGTTTCCACTGTCTCGTCGATCACCGAACTTCCCTCAGTTCCTC
ATCCGCTTCCCCCACAGCAGCGTGTTGCGCCAGGAGCCGCTCCGAAAAAG
ACCGCTAGCCTCGCTCCTCCAGTGCCTGTGGCGCGACCGGGAGGAAACCG
CGCCTCATCTGTTTCGCCTATTCCAGAGGAGTTACCCGACAGCCCAACCA
TTTCGCAAGATCAATACGGCTCTGCACAGCCGTATCCACCTAGCTGGTAC
TCAGGACAGGCAGAATCGGAAATCTTGGGGACGTATCTAGACGGCGAATC
TGACGATGATGTGTCTAGACATTCTACTCACCAAGCCGGAGTAGCTACGG
CTACGCTTCTCAGGCAAGCCAGCGTCGGGACTAGAGGAAAACCTTCCTTA
CGCACAATTCAAAAATCGAATGCTAGCTCGCCAGTACCGCCCTCAGAGAG
GACCCCTGTGTCTGCCAGACCGACTACGTCCGGGACTACGGGCACGGAGT
TTATACTGAAAGAAATATCTATAGGGCCTGATCGGAGAGATTCTATGTCG
TCCAGCTCAACTGGGTCTGCGCACTTCAACCTGGAGAAAGCACCAATCGT
CTTGGATCTCAGCACTCAACATCCTGCCTTGGCTCGTCCATACGTTGACA
ATGGAGGTTTGGAAAAGGAGGTCGGAGCCCTTCCCAGGGCTGCGCCAACA
ATGAGCGACAAACGACCAGGTGGCCGCCGGCCTCCGCGTCTCAACATGAG
TGCTGTTCGTGACGCAGAGGCTCGAGGGAGCCTTACGAGTTTGCCCGACC
TCATTCGACGTGCGACAAGACTTGCATCGAATCTAGAGCATGGCCGGACT
GCGAGTCGAAACGATCTACTGAATGGCGGTGGTGGTTCCAGGTTCCAATA
TGACGCCAAACGCAAGTCAGGATCAATCAAGAGCATTTTGGCCTCGTTTC
CCCCGCCTGCTGCGACCCCCGAAGGCGGTCACTCGTCTTGGCCTTTCTTC
TTCAGAAGGTCCACACTGCATCAGATACACTCCAATGAACCACCGCGAGC
AGATGGAGATCAAGAGAAGGCTGCACCAAAACAACCGCGCCGATGCTGCG
GGCTGCCACCATGGCTGTTTGCTCTTATTTGCGTCGTGATCATCATTGTC
ATCCTGGCCGCCATCCTCATCCCCGTTGGTCTGCTCGTGGTGCGCCATAA
GTCGAGTGGTACGAGCTGCGCAAAGACCAACCCATGTGAAAACGGTGGCG
TCAGTGTCTCGAGCGGCAGCGTTTGCTCCTGCGTTTGCGCCAACGGCTAT
ACCGGATCTCGCTGTACGATCTCTGGTGATGCCAGCTGCGTCACAACTGA
AGTCGATGGTAAGAACGCCACCATGGGCAGCGAGCTTCCTCGTCTCTTTG
AGTACGCGCAGCAAAACTACAGTATCCCTCTTGATGCTGTGACGATCATG
GCCCTATTCAGCCAGAGCAATGTGTCCTGCACGACGGAAAACACCCTTAT
TTCGTTCTCTAGCGTATCAACAAGCAGCAGCAAAGCCCGCCGTGCTCTGT
CTGACCCGTCCCTGGGGGAGCCCTCAATCTCCGATCACCTGCTAGCCAAC
CTCGAGCACCATCCCAGCCAAGCTTTAACAGAACGTACTCCCACGCAAGC
TCTTGCAGCCCGCGACTCTGTCGCTACAGCGCACGGCATCGTCTTTGATG
GTGACCCACCAAGTAGCACAGGAACGGCAACCGCAACAGCAACCAAAACA
AGCCAAGAGTCCTCAGCCACGCAAACTTCAACGTCTAGTTCAAGTACGAC
GACGACCACTACTTCTTCGTCCTCCAATTCGACAACCGTCACATCAGAAG
TCCTTGATTTTGCCCGTGTCGCTATTCTCTACATCCTGGAAGAAACTGGT
ACCCTCTCCGCAGCCGAGTTCTCAGAAAGCAATATCCAATCCTACCTTTC
TGATGACTACTCGGACGCGAAGAGCCACAGCTTCACCGTCGACCTCACTC
CCTCCGGCGTGATAGGCAATTACACTTTGAACTTTGACGACTTCGAGATA
ACATTACCCAGTGGAAGTGTTGTTGGCGGTGACTAGATGGATCCTCAAGC
TGAAAAGACAGGCTCCGGGCCCCAGCAAGATGGGGACGTTGCGCGAAAAG
GATCAGTCAAGCGAGCGCGGGAGATGCTTCAGGCTGGAAAGCGTCCTGAG
AGAGCGCCAGAGGAACCAGCGCCTTCATTTCGCATCAATCCAGCCCATAT
GACACAATGGCCTCTGCCCGACAACGCCCCTCTGCCGCCGAATATGGCCA
ACCCTCAAGCAACCTTGGTCGTTCCGAAAGGGCCTCCGCCAGTGCGCCCA
CCTCGTCCGGATTGCCCGTCCCCTTCCGTCTACTCGGAGAGAAGCATGTC
CGACGTCCCACCAGCACCTAGCCCGTTGAACATCAAACGTCCAGTCCCCT
CCTTTTCCCAGCCATTCCCAATCCCGCCAGGCCCGCGTCCCGCCATCAGG
ATCCCCATCCCTCGGCCGCCTAGCCCAGACAGTGTTGCAGGTTCAACACC
TCGCGTTTCCGTCGCCACAGACGACCTCTTTCGACAGTCGGGAGTTTCCA
CTGTCTCGTCGATCACCGAACTTCCCTCAGTTCCTCATCCGCTTCCCCCA
CAGCAGCGTGTTGCGCCAGGAGCCGCTCCGAAAAAGACCGCTAGCCTCGC
TCCTCCAGTGCCTGTGGCGCGACCGGGAGGAAACCGCGCCTCATCTGTTT
CGCCTATTCCAGAGGAGTTACCCGACAGCCCAACCATTTCGCAAGATCAA
TACGGCTCTGCACAGCCGTATCCACCTAGCTGGTACTCAGGACAGGCAGA
ATCGGAAATCTTGGGGACGTATCTAGACGGCGAATCTGACGATGATGTGT
CTAGACATTCTACTCACCAAGCCGGAGTAGCTACGGCTACGCTTCTCAGG
CAAGCCAGCGTCGGGACTAGAGGAAAACCTTCCTTACGCACAATTCAAAA
ATCGAATGCTAGCTCGCCAGTACCGCCCTCAGAGAGGACCCCTGTGTCTG
CCAGACCGACTACGTCCGGGACTACGGGCACGGAGTTTATACTGAAAGAA
ATATCTATAGGGCCTGATCGGAGAGATTCTATGTCGTCCAGCTCAACTGG
GTCTGCGCACTTCAACCTGGAGAAAGCACCAATCGTCTTGGATCTCAGCA
CTCAACATCCTGCCTTGGCTCGTCCATACGTTGACAATGGAGGTTTGGAA
AAGGAGGTCGGAGCCCTTCCCAGGGCTGCGCCAACAATGAGCGACAAACG
ACCAGGTGGCCGCCGGCCTCCGCGTCTCAACATGAGTGCTGTTCGTGACG
CAGAGGCTCGAGGGAGCCTTACGAGTTTGCCCGACCTCATTCGACGTGCG
ACAAGACTTGCATCGAATCTAGAGCATGGCCGGACTGCGAGTCGAAACGA
TCTACTGAATGGCGGTGGTGGTTCCAGGTTCCAATATGACGCCAAACGCA
AGTCAGGATCAATCAAGAGCATTTTGGCCTCGTTTCCCCCGCCTGCTGCG
ACCCCCGAAGGCGGTCACTCGTCTTGGCCTTTCTTCTTCAGAAGGTCCAC
ACTGCATCAGATACACTCCAATGAACCACCGCGAGCAGATGGAGATCAAG
AGAAGGCTGCACCAAAACAACCGCGCCGATGCTGCGGGCTGCCACCATGG
CTGTTTGCTCTTATTTGCGTCGTGATCATCATTGTCATCCTGGCCGCCAT
CCTCATCCCCGTTGGTCTGCTCGTGGTGCGCCATAAGTCGAGTGGTACGA
GCTGCGCAAAGACCAACCCATGTGAAAACGGTGGCGTCAGTGTCTCGAGC
GGCAGCGTTTGCTCCTGCGTTTGCGCCAACGGCTATACCGGATCTCGCTG
TACGATCTCTGGTGATGCCAGCTGCGTCACAACTGAAGTCGATGGTAAGA
ACGCCACCATGGGCAGCGAGCTTCCTCGTCTCTTTGAGTACGCGCAGCAA
AACTACAGTATCCCTCTTGATGCTGTGACGATCATGGCCCTATTCAGCCA
GAGCAATGTGTCCTGCACGACGGAAAACACCCTTATTTCGTTCTCTAGCG
TATCAACAAGCAGCAGCAAAGCCCGCCGTGCTCTGTCTGACCCGTCCCTG
GGGGAGCCCTCAATCTCCGATCACCTGCTAGCCAACCTCGAGCACCATCC
CAGCCAAGCTTTAACAGAACGTACTCCCACGCAAGCTCTTGCAGCCCGCG
ACTCTGTCGCTACAGCGCACGGCATCGTCTTTGATGGTGACCCACCAAGT
AGCACAGGAACGGCAACCGCAACAGCAACCAAAACAAGCCAAGAGTCCTC
AGCCACGCAAACTTCAACGTCTAGTTCAAGTACGACGACGACCACTACTT
CTTCGTCCTCCAATTCGACAACCGTCACATCAGAAGTCCTTGATTTTGCC
CGTGTCGCTATTCTCTACATCCTGGAAGAAACTGGTACCCTCTCCGCAGC
CGAGTTCTCAGAAAGCAATATCCAATCCTACCTTTCTGATGACTACTCGG
ACGCGAAGAGCCACAGCTTCACCGTCGACCTCACTCCCTCCGGCGTGATA
GGCAATTACACTTTGAACTTTGACGACTTCGAGATAACATTACCCAGTGG
AAGTGTTGTTGGCGGTGACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002063-T1.utr5p1 | KJC3_002063-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002063-T1.utr3p1 | KJC3_002063-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000742 |
| DBxref | InterPro:IPR013032 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1569422..1574261 + |
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