You are here

Home

KJC3_002067-T1, KJC3_002067-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002067-T1
Unique NameKJC3_002067-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1582462..1584620-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002067-T1 ID=KJC3_002067-T1|Name=KJC3_002067-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2159bp|location=Sequence derived from alignment at ch2:1582462..1584620- (Aspergillus niger KJC3)
GGGGTTCATGGAGCAGAGCAAGCATGCTTCCAACTGCCACCATCGATTTA
GTATGACAAATAAGGGTCTATTCTGACTAGTCGCCAAGACAACAACAGCA
ACACTAATTCTGATTAACTACGTTATCTACAAATGTCTGACTCAAATCAG
CCGGGTTTGTTTTCTAAGCAATCCATCTCCTCCAGTCCGAGGCTAATCAT
CAACTAGACCTGCACCTCTTTGGAACCAGAAAACAGACCGGAACAGGGTT
ACCATGTCATCATCCAAGATAAGATGGGCAGCGGCTACACGGAATTACCG
ACCGGATGAACTTTGATGCCCTTCGCCCATGTTCTTCACCGTTCCAACTT
CACTGTGGACCATGCTGGATTTATCAGCAATGGCACACTGGCGGCTGTTT
CAGCGGCTGAGCTAAGCATATCCGGGTGCGCAGATTCACCAAGGGCGCAA
GTATTGCGTGATTTCCCCAGGACATGAGGAAATTAAATTTTTCAGCCCAG
TCGCCCGATTGTGCAGGCGGTCACAGACAATGTCGTGATCGAGAACGGCA
GAATGAGCCGGCATGTATGAGGGACTGAGGGCAGGAAGAACGGGTGCCCC
CGACCCGATGATGTCGTGATTGCCCCTGCCCTGTCTTTCTTTTATATCGG
ACTGGTCAAGTCATCTCCATTGTGTTCTGTCTACATCATCTCTTGCCTCC
CACTTCAGTTCTTGTCCTTCCGTCATCCCTCCAAGTCTAGTCGAGCCATT
ACATATAGACCCGCTTGCATTTCATCTGCTCGTCCTTGGGATTGACTTGT
CTACCATATACCCTGTCATTCGACTCCTCATTCACCATGCCTGCGAAGAC
GTCTGAGAACTACCCCTCCGCCTATGAGGCTGCCGACCTACGGGACACTG
CCACAGACTCTGGCTATGTCAGTGGTGGCTCTAGTGATGACTACTCCCCA
GAAATCGTCTTCACGAAGCCTCACTTGAACTTCCTCAACAGACAATTGCA
GTTTCTTGAGCCTCAAGGTCAGCATGGGTTGCCCCTCTCACGCGTCTCCA
GGCCAAGTTGACTAACATATACGCAGATGTCCTGAGATGGTGTGTGACCT
CTCTGCCTCACCTCTACCAGACCACCGCTTTCGGTCTCACCGGTCTCGTG
ACCCTGGACATGCTCTCCAAGCTGGACGTGCCCCGGCCCCAGATGGTTGA
TCTCATCTTCCTCGACACCCTCCACCACTTCAAAGAGACCCTGGATCTGG
TCGATCGTGTCCGCCAGAAGTATCCTTTGGTCAACATCCATGTCTTCAAG
CCCCAGGGCCTGGAGACCGAGGAAGAATTTGCCCAGAAGTACGGTGCCCG
TCTCTGGGAGAAGGACGACCAGTTCTACGACTGGGTGGCCAAGGTTGAGC
CTGCCCAGCGTGCCTACCGCGAACTCAACGTCCACGCTGTCCTTACTGGA
CGTCGTCGCAGCCAGGGTGGCAAGCGTGGTGACCTCGATGTCATTGAGGT
TGACGAGGCTGGCCTGATCAAGATCAACCCTCTTGCCAACTGGACCTTCG
AACAGGTCAAGCAATACGTCCAAGACAACGATGTTCCCTACAACGAGTTG
CTCGACCGTGGTTACAAGAGCATTGGTGACTACCACTCCACCCAGCCGGT
CAAGGAGAACGAAGATGAGCGGTCTGGTCGCTGGAAGGGCCAGGAGAAGA
CTGAGTGCGGTATCCACAACCCTCGCTCCAAGTATGCTCAGTTCCTCATG
GAAATGGAGCGTAAGCGTCAAGAAGAGGCCCTATCGCAGGCTCTTCAGAC
GTCCCTGACGACGTCCGCTCAGTAAAGGCCGCTTGTCTTCTTTCTCACCT
TGCATCTATAACGGCGTTCTATGACCTGGGAGTTTAATCTGGAGTGGAGT
TACATAGCCTTGTTTTTTTTACTTGTTTTAAAAAGGAGACCCCATGGTAC
GGGGATCGGAGGATTATGTGTTATGACATCTGGGAAATTCTTGAGCAAAT
GATTCGAATGGGATCAAAAGCCGCCCGTCAATCCTAATCCGAATGGAGTT
ACTGTACATACAGGGTTGGCGGAGACTGGCAGGGATTTGCAAAAGACGGC
TTACAAGCCAAATACATTAATGACTTGCATGATACAAATGATTAGACCTT
TTTATTCTA
back to top

Coding sequence (CDS) from alignment at ch2:1582462..1584620-

>KJC3_002067-T1 ID=KJC3_002067-T1|Name=KJC3_002067-T1|organism=Aspergillus niger KJC3|type=CDS|length=1860bp|location=Sequence derived from alignment at ch2:1582462..1584620- (Aspergillus niger KJC3)
ATGTCCTGAGATGGTGTGTGACCTCTCTGCCTCACCTCTACCAGACCACC
GCTTTCGGTCTCACCGGTCTCGTGACCCTGGACATGCTCTCCAAGCTGGA
CGTGCCCCGGCCCCAGATGGTTGATCTCATCTTCCTCGACACCCTCCACC
ACTTCAAAGAGACCCTGGATCTGGTCGATCGTGTCCGCCAGAAGTATCCT
TTGGTCAACATCCATGTCTTCAAGCCCCAGGGCCTGGAGACCGAGGAAGA
ATTTGCCCAGAAGTACGGTGCCCGTCTCTGGGAGAAGGACGACCAGTTCT
ACGACTGGGTGGCCAAGGTTGAGCCTGCCCAGCGTGCCTACCGCGAACTC
AACGTCCACGCTGTCCTTACTGGACGTCGTCGCAGCCAGGGTGGCAAGCG
TGGTGACCTCGATGTCATTGAGGTTGACGAGGCTGGCCTGATCAAGATCA
ACCCTCTTGCCAACTGGACCTTCGAACAGGTCAAGCAATACGTCCAAGAC
AACGATGTTCCCTACAACGAGTTGCTCGACCGTGGTTACAAGAGCATTGG
TGACTACCACTCCACCCAGCCGGTCAAGGAGAACGAAGATGAGCGGTCTG
GTCGCTGGAAGGGCCAGGAGAAGACTGAGTGCGGTATCCACAACCCTCGC
TCCAAGTATGCTCAGTTCCTCATGGAAATGGAGCGTAAGCGTCAAGAAGA
GGCCCTATCGCAGGCTCTTCAGACGTCCCTGACGACGTCCGCTCAGTAAA
TGCCTGCGAAGACGTCTGAGAACTACCCCTCCGCCTATGAGGCTGCCGAC
CTACGGGACACTGCCACAGACTCTGGCTATGTCAGTGGTGGCTCTAGTGA
TGACTACTCCCCAGAAATCGTCTTCACGAAGCCTCACTTGAACTTCCTCA
ACAGACAATTGCAGTTTCTTGAGCCTCAAGATGTCCTGAGATGGTGTGTG
ACCTCTCTGCCTCACCTCTACCAGACCACCGCTTTCGGTCTCACCGGTCT
CGTGACCCTGGACATGCTCTCCAAGCTGGACGTGCCCCGGCCCCAGATGG
TTGATCTCATCTTCCTCGACACCCTCCACCACTTCAAAGAGACCCTGGAT
CTGGTCGATCGTGTCCGCCAGAAGTATCCTTTGGTCAACATCCATGTCTT
CAAGCCCCAGGGCCTGGAGACCGAGGAAGAATTTGCCCAGAAGTACGGTG
CCCGTCTCTGGGAGAAGGACGACCAGTTCTACGACTGGGTGGCCAAGGTT
GAGCCTGCCCAGCGTGCCTACCGCGAACTCAACGTCCACGCTGTCCTTAC
TGGACGTCGTCGCAGCCAGGGTGGCAAGCGTGGTGACCTCGATGTCATTG
AGGTTGACGAGGCTGGCCTGATCAAGATCAACCCTCTTGCCAACTGGACC
TTCGAACAGGTCAAGCAATACGTCCAAGACAACGATGTTCCCTACAACGA
GTTGCTCGACCGTGGTTACAAGAGCATTGGTGACTACCACTCCACCCAGC
CGGTCAAGGAGAACGAAGATGAGCGGTCTGGTCGCTGGAAGGGCCAGGAG
AAGACTGAGTGCGGTATCCACAACCCTCGCTCCAAGTATGCTCAGTTCCT
CATGGAAATGGAGCGTAAGCGTCAAGAAGAGGCCCTATCGCAGGCTCTTC
AGACGTCCCTGACGACGTCCGCTCAGTAAATGCCTGCGAAGACGTCTGAG
AACTACCCCTCCGCCTATGAGGCTGCCGACCTACGGGACACTGCCACAGA
CTCTGGCTATGTCAGTGGTGGCTCTAGTGATGACTACTCCCCAGAAATCG
TCTTCACGAAGCCTCACTTGAACTTCCTCAACAGACAATTGCAGTTTCTT
GAGCCTCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0019379sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)
Vocabulary: Molecular Function
TermDefinition
GO:0004604phosphoadenylyl-sulfate reductase (thioredoxin) activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002067KJC3_002067Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002067-T1KJC3_002067-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002067-T1.cdsKJC3_002067-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002067-T1.utr3p1KJC3_002067-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002067-T1.exon3KJC3_002067-T1.exon3Aspergillus niger KJC3exon
KJC3_002067-T1.exon2KJC3_002067-T1.exon2Aspergillus niger KJC3exon
KJC3_002067-T1.exon1KJC3_002067-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002067-T1.utr5p2KJC3_002067-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002067-T1.utr5p1KJC3_002067-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264FVQ
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR004511
DBxrefInterPro:IPR011800
DBxrefInterPro:IPR002500
DBxrefPFAM:PF01507
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1582462..1584620 -
Powered by Drupal