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KJC3_002069-T1, KJC3_002069-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002069-T1
Unique NameKJC3_002069-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1587446..1588696-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002069-T1 ID=KJC3_002069-T1|Name=KJC3_002069-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1251bp|location=Sequence derived from alignment at ch2:1587446..1588696- (Aspergillus niger KJC3)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTATATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
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Coding sequence (CDS) from alignment at ch2:1587446..1588696-

>KJC3_002069-T1 ID=KJC3_002069-T1|Name=KJC3_002069-T1|organism=Aspergillus niger KJC3|type=CDS|length=1251bp|location=Sequence derived from alignment at ch2:1587446..1588696- (Aspergillus niger KJC3)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTATATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016992lipoate synthase activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002069KJC3_002069Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002069-T1.cdsKJC3_002069-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002069-T1.exon1KJC3_002069-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002069-T1KJC3_002069-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926131E
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR031691
DBxrefInterPro:IPR003698
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR006638
DBxrefPFAM:PF04055
DBxrefPFAM:PF16881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1587446..1588696 -
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