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KJC3_002071-T1, KJC3_002071-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002071-T1
Unique NameKJC3_002071-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1592523..1594646+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002071-T1 ID=KJC3_002071-T1|Name=KJC3_002071-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2124bp|location=Sequence derived from alignment at ch2:1592523..1594646+ (Aspergillus niger KJC3)
CTTCTCCCAAAAAATTAACGGCTTGTCGCATTCTCCCTGCCTCCTGCAAA
TTTGAACTTTCTGGGGTGGCAGTTCGTCATGCTCTCTGAATGTTTCATCG
CATCGACGCTGGCGTCTAGCAAAGCGCCAGCGTCTGCGACCCTCCGCGAT
GTGGGAGTTTGCGTCCATGAATTCCAGCCCACGCTGAACCTGCGCTCCAC
CTTCAAGAAGAGCTCGACCGCGGCCAATTGCTTGGCTGTAAGCCCGTCGC
ATGTGTTCGCTGCGCAGTCTGAGAAAGCCATTGTACATGTGTATAGCAGG
GAGAAAGGCAACCAGGAAGCCACCGTTCCTTTCCCGGAGCGCATTCGCAG
CATTGCTGTCGCCGGGGGCAAGAACGGCGATGTTCTGGTTTTGGGAACTG
AAGGGGGACGTTTGATTCTATGGGAGGTAAATCAATCATTCACAGCCCCA
ATGGCGTCGCCAGCCATTCGTCATGGTTTCAAACTAACAGCATGTGCTTC
CTAGACATGCACCGGGCGACAAGTGGCTACGACAGCGTCGCATCTGCGGC
CAGTGACCTCGCTCGTGGTCGATCCCAATTCCAACTTCATTCTGTCGGGC
TCATCCGATGCCAGCATTCATGTTTGGTCGTTAGTGGATCTCTTATCCTT
TACGAAACCTCCATCCGGCCGTGATCGTCAGCCTCCGAACTCCCCCATCC
GTACCTTCTCCAACCACCGCGCCGCCATCACCGCCATCGCTGTGGGTCAC
AGCGCGGGTCGATACAACATTGCTCTGTCTGCTGCAGATGATAGCACAGC
CATTGCCTGGGATTATCACACCGGCCGTCTCCTGCGCACCTTCCTCTTGC
CTTCCAATGCGAAGTCGCTGGCCCTTGACCCGGCCGACCGGGCCTTCTAT
GTCGGCTACGAAGATGGCAGTATCCAGTCGATCGACTTCTACAAGAACCA
GTCCATCCAAAACCCTCTCCACGACCCCTCCCTTCAATCAACTCCCTCGC
AGCCACCCGCAGAGGATCGCTGGGCACCGCCATCGGCCGATTGCGGCGCA
GCGCATGCGCTCACTCTCTGCTACGATGGAATGACGTTGCTCTCTGGCCA
TCAGAATGGCAAGGTTCTGTCATGGACAGTTGGAAGGAAGAAGTACGCCT
CGACCGTGGCAGACTACACACACCCTGTCACGAACCTGTTTATGCTTCCT
CCCAACGGTCTTCCTCATCCTTCCCTCGACCTCAAGCGGGTAGCACACAC
CATCGTCAAGCCCCGCTACGACTCTTCCCTGTCCGAAACCTCCCAAGCAG
CCGGCGCCGTTCCAGCCGATTACACCTTCAGCACGCACCTCCTCCCCTCG
ATCTCATCCAAGCCCGACTCTGCTAAGCCCGACCAATTCACCGAAGCCTT
CTCCCACGCGTACTTCCCCGAATCCATGCTCGAAGAAGGTCTCGCCGAAT
TAGCTGCCTTCAGCCAGCCCACTAGCAACGGAGCTCCAGTCTCCTCGATA
GCACAGGGCATCAGCGACGAAGACTTAGCAGCCAAGGATTCCCAAATATC
CCAACTGGGGGAGGAACTCGCCACGCTGAAGAAGAAGTCATCCGTCAATG
AGACCGCCCGCCAATCCACAACAGACGAAGTGACCAAACTTCGCTCGGAC
CTCGCCAACCTACACGACTATATCAATGAGCTTCACGAGAAACAAGAACA
GGCGCAGCGGGAGAAGATTCTCCGACAGGCGCGGAAAGAAGAGCGAGAGA
CCCGCCGTCGGGAAGCTTGGTTTGCAGCCGAAAAGAAGGGCAAGAAGGGA
GATGCGGTTCTCCGTAAGATGGACGCCGAGGATACCGTCATGACGAGTGA
TACGGATGATCAGAGCAGTGATGAGTAGACTACATTCATCTCCTCACTCT
GCTTCCATAATCATCCACTATCGAACCCACATTACATTGCTACAGTACAT
CATTCGACAGGCGCAGCGGTCTCAAAAAAAGTCTCAATGATATGACAAAA
GTGGTATGTGTATCATAGCAAACAGCACATCACATGATGCATGTCTTTTA
CACTATGCTTGGATAGACACGGAGTCTTGTATTGTATATAGATCAATGGG
TAATAAATAAAAGTTTCACCAACA
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Coding sequence (CDS) from alignment at ch2:1592523..1594646+

>KJC3_002071-T1 ID=KJC3_002071-T1|Name=KJC3_002071-T1|organism=Aspergillus niger KJC3|type=CDS|length=3444bp|location=Sequence derived from alignment at ch2:1592523..1594646+ (Aspergillus niger KJC3)
ATGCTCTCTGAATGTTTCATCGCATCGACGCTGGCGTCTAGCAAAGCGCC
AGCGTCTGCGACCCTCCGCGATGTGGGAGTTTGCGTCCATGAATTCCAGC
CCACGCTGAACCTGCGCTCCACCTTCAAGAAGAGCTCGACCGCGGCCAAT
TGCTTGGCTGTAAGCCCGTCGCATGTGTTCGCTGCGCAGTCTGAGAAAGC
CATTGTACATGTGTATAGCAGGGAGAAAGGCAACCAGGAAGCCACCGTTC
CTTTCCCGGAGCGCATTCGCAGCATTGCTGTCGCCGGGGGCAAGAACGGC
GATGTTCTGGTTTTGGGAACTGAAGGGGGACGTTTGATTCTATGGGAGAC
ATGCACCGGGCGACAAGTGGCTACGACAGCGTCGCATCTGCGGCCAGTGA
CCTCGCTCGTGGTCGATCCCAATTCCAACTTCATTCTGTCGGGCTCATCC
GATGCCAGCATTCATGTTTGGTCGTTAGTGGATCTCTTATCCTTTACGAA
ACCTCCATCCGGCCGTGATCGTCAGCCTCCGAACTCCCCCATCCGTACCT
TCTCCAACCACCGCGCCGCCATCACCGCCATCGCTGTGGGTCACAGCGCG
GGTCGATACAACATTGCTCTGTCTGCTGCAGATGATAGCACAGCCATTGC
CTGGGATTATCACACCGGCCGTCTCCTGCGCACCTTCCTCTTGCCTTCCA
ATGCGAAGTCGCTGGCCCTTGACCCGGCCGACCGGGCCTTCTATGTCGGC
TACGAAGATGGCAGTATCCAGTCGATCGACTTCTACAAGAACCAGTCCAT
CCAAAACCCTCTCCACGACCCCTCCCTTCAATCAACTCCCTCGCAGCCAC
CCGCAGAGGATCGCTGGGCACCGCCATCGGCCGATTGCGGCGCAGCGCAT
GCGCTCACTCTCTGCTACGATGGAATGACGTTGCTCTCTGGCCATCAGAA
TGGCAAGGTTCTGTCATGGACAGTTGGAAGGAAGAAGTACGCCTCGACCG
TGGCAGACTACACACACCCTGTCACGAACCTGTTTATGCTTCCTCCCAAC
GGTCTTCCTCATCCTTCCCTCGACCTCAAGCGGGTAGCACACACCATCGT
CAAGCCCCGCTACGACTCTTCCCTGTCCGAAACCTCCCAAGCAGCCGGCG
CCGTTCCAGCCGATTACACCTTCAGCACGCACCTCCTCCCCTCGATCTCA
TCCAAGCCCGACTCTGCTAAGCCCGACCAATTCACCGAAGCCTTCTCCCA
CGCGTACTTCCCCGAATCCATGCTCGAAGAAGGTCTCGCCGAATTAGCTG
CCTTCAGCCAGCCCACTAGCAACGGAGCTCCAGTCTCCTCGATAGCACAG
GGCATCAGCGACGAAGACTTAGCAGCCAAGGATTCCCAAATATCCCAACT
GGGGGAGGAACTCGCCACGCTGAAGAAGAAGTCATCCGTCAATGAGACCG
CCCGCCAATCCACAACAGACGAAGTGACCAAACTTCGCTCGGACCTCGCC
AACCTACACGACTATATCAATGAGCTTCACGAGAAACAAGAACAGGCGCA
GCGGGAGAAGATTCTCCGACAGGCGCGGAAAGAAGAGCGAGAGACCCGCC
GTCGGGAAGCTTGGTTTGCAGCCGAAAAGAAGGGCAAGAAGGGAGATGCG
GTTCTCCGTAAGATGGACGCCGAGGATACCGTCATGACGAGTGATACGGA
TGATCAGAGCAGTGATGAGTAGATGCTCTCTGAATGTTTCATCGCATCGA
CGCTGGCGTCTAGCAAAGCGCCAGCGTCTGCGACCCTCCGCGATGTGGGA
GTTTGCGTCCATGAATTCCAGCCCACGCTGAACCTGCGCTCCACCTTCAA
GAAGAGCTCGACCGCGGCCAATTGCTTGGCTGTAAGCCCGTCGCATGTGT
TCGCTGCGCAGTCTGAGAAAGCCATTGTACATGTGTATAGCAGGGAGAAA
GGCAACCAGGAAGCCACCGTTCCTTTCCCGGAGCGCATTCGCAGCATTGC
TGTCGCCGGGGGCAAGAACGGCGATGTTCTGGTTTTGGGAACTGAAGGGG
GACGTTTGATTCTATGGGAGACATGCACCGGGCGACAAGTGGCTACGACA
GCGTCGCATCTGCGGCCAGTGACCTCGCTCGTGGTCGATCCCAATTCCAA
CTTCATTCTGTCGGGCTCATCCGATGCCAGCATTCATGTTTGGTCGTTAG
TGGATCTCTTATCCTTTACGAAACCTCCATCCGGCCGTGATCGTCAGCCT
CCGAACTCCCCCATCCGTACCTTCTCCAACCACCGCGCCGCCATCACCGC
CATCGCTGTGGGTCACAGCGCGGGTCGATACAACATTGCTCTGTCTGCTG
CAGATGATAGCACAGCCATTGCCTGGGATTATCACACCGGCCGTCTCCTG
CGCACCTTCCTCTTGCCTTCCAATGCGAAGTCGCTGGCCCTTGACCCGGC
CGACCGGGCCTTCTATGTCGGCTACGAAGATGGCAGTATCCAGTCGATCG
ACTTCTACAAGAACCAGTCCATCCAAAACCCTCTCCACGACCCCTCCCTT
CAATCAACTCCCTCGCAGCCACCCGCAGAGGATCGCTGGGCACCGCCATC
GGCCGATTGCGGCGCAGCGCATGCGCTCACTCTCTGCTACGATGGAATGA
CGTTGCTCTCTGGCCATCAGAATGGCAAGGTTCTGTCATGGACAGTTGGA
AGGAAGAAGTACGCCTCGACCGTGGCAGACTACACACACCCTGTCACGAA
CCTGTTTATGCTTCCTCCCAACGGTCTTCCTCATCCTTCCCTCGACCTCA
AGCGGGTAGCACACACCATCGTCAAGCCCCGCTACGACTCTTCCCTGTCC
GAAACCTCCCAAGCAGCCGGCGCCGTTCCAGCCGATTACACCTTCAGCAC
GCACCTCCTCCCCTCGATCTCATCCAAGCCCGACTCTGCTAAGCCCGACC
AATTCACCGAAGCCTTCTCCCACGCGTACTTCCCCGAATCCATGCTCGAA
GAAGGTCTCGCCGAATTAGCTGCCTTCAGCCAGCCCACTAGCAACGGAGC
TCCAGTCTCCTCGATAGCACAGGGCATCAGCGACGAAGACTTAGCAGCCA
AGGATTCCCAAATATCCCAACTGGGGGAGGAACTCGCCACGCTGAAGAAG
AAGTCATCCGTCAATGAGACCGCCCGCCAATCCACAACAGACGAAGTGAC
CAAACTTCGCTCGGACCTCGCCAACCTACACGACTATATCAATGAGCTTC
ACGAGAAACAAGAACAGGCGCAGCGGGAGAAGATTCTCCGACAGGCGCGG
AAAGAAGAGCGAGAGACCCGCCGTCGGGAAGCTTGGTTTGCAGCCGAAAA
GAAGGGCAAGAAGGGAGATGCGGTTCTCCGTAAGATGGACGCCGAGGATA
CCGTCATGACGAGTGATACGGATGATCAGAGCAGTGATGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002071KJC3_002071Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002071-T1.utr5p1KJC3_002071-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002071-T1.exon1KJC3_002071-T1.exon1Aspergillus niger KJC3exon
KJC3_002071-T1.exon2KJC3_002071-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002071-T1.cdsKJC3_002071-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002071-T1.utr3p1KJC3_002071-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002071-T1KJC3_002071-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1592523..1594646 +
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