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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1595430..1596902- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002072-T1 ID=KJC3_002072-T1|Name=KJC3_002072-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1473bp|location=Sequence derived from alignment at ch2:1595430..1596902- (Aspergillus niger KJC3)
ATGAACAAGTGTTCGTCCCTGAAAGTTTCTTCTTCTTCCGGCCGCCCTGA
AATGCGCCGTCCCAACTATAAGGTATGTCGATGACAGCTTGTACCTCCTT
GTAATAGCAATCAGTATCTGACGTGAGAAAATGTGGTACATATAGAGACG
CAAGACTACCCATGAAGATAGTCCTCCTTCGCACCACAATGGCATAACCG
GTCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGC
CGATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAACCAAGTA
AACCCCCCTTGACAAATGCTTCCCAGGGGCTGCTGGTGTATATGACCGCT
AACAGATGCTGCGCAGCGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCC
GGTGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGT
GTTTGACGATAATGAATATGGCGCCCACTGTGATTATTATGACCATAGAG
ACTCCTATAACTCACCCATTGCCAAAAATAGAGACCAAGTTGATGGCGAT
ACATCCTCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCACTTCCT
GACTCACGTTCTGTCGTATCTTGAGACTCCACCATATTTGCGCAAACATC
TCTTCCGCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTG
GACATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGG
CATTGTCGTTTCTAGTTCAGCGCGGAAAAATAACCCGGCCAGCAAGATCA
CTCAGATGAGCAAAGATATCCTTTCCACCGTCGTAACAGCTCTACTAATA
ATGGCCCTGCCACAATAGTTGACACGGGTCTCTCACAGAAAATAGTTCTC
CCAAACATCCACCTCCCAGAACATGCCCGAGTCACTGTTCGATTTCCCCA
GCATGAGTTCCCCTATGCAGAACCCGTACACCCATCCACCCCTCGTGCCG
AAGCGGGTTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCACTCT
TCCGTTTTTACGGAATGTCCCTATGACGGTGGCTACGATCTCTCCTTCGG
CACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCAC
AACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAA
ATATCGCCAGACTTCCAGCATATTCTTGTCGTCTTCGGTGGTGTCGCTGG
GATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATCC
GCCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCC
GGACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGCT
AACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCAT
ACCGATGTCATCACGACGGTTAG back to topCoding sequence (CDS) from alignment at ch2:1595430..1596902- >KJC3_002072-T1 ID=KJC3_002072-T1|Name=KJC3_002072-T1|organism=Aspergillus niger KJC3|type=CDS|length=5100bp|location=Sequence derived from alignment at ch2:1595430..1596902- (Aspergillus niger KJC3)
AAAATAGTTCTCCCAAACATCCACCTCCCAGAACATGCCCGAGTCACTGT
TCGATTTCCCCAGCATGAGTTCCCCTATGCAGAACCCGTACACCCATCCA
CCCCTCGTGCCGAAGCGGGTTATTACTGGGGCTACTATGTGCGACGATGT
CGATCTCACTCTTCCGTTTTTACGGAATGTCCCTATGACGGTGGCTACGA
TCTCTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAG
AGGAGAAGCCACAACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTT
TGTCGGGATCAAATATCGCCAGACTTCCAGCATATTCTTGTCGTCTTCGG
TGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTG
ACATGGCCATCCGCCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTA
AATTTCCTACCCGGACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGT
TTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGT
TGAGAAAGGCATACCGATGTCATCACGACGGTTAGCGCTCATTCCGTCGA
GCAAAAGACCTTCCTAGCCGGTGTAATCGCACGCGCCCTTGCCGTATTCT
GCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATATGGCGCCCACTGT
GATTATTATGACCATAGAGACTCCTATAACTCACCCATTGCCAAAAATAG
AGACCAAGTTGATGGCGATACATCCTCTCCAAAAGCCTATACCGCGAATT
CAGACCCCTCGCACTTCCTGACTCACGTTCTGTCGTATCTTGAGACTCCA
CCATATTTGCGCAAACATCTCTTCCGCATACATCCCAATCTTCGCACCGC
TGGATTGCTGCCCAGCTTGGACATGCCTCATCACTTGCGTGCCAACGAGT
GGTGCGACTTCCGTGAAGGCATTGTCGTTTCTAGTTCAGCGCGGAAAAAT
AACCCGGCCAGCAAGATCACTCAGATGAGCAAAGATATCCTTTCCACCGT
CAGACGCAAGACTACCCATGAAGATAGTCCTCCTTCGCACCACAATGGCA
TAACCGGTCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAG
GGTGGCCGATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAAC
CAAATGAACAAGTGTTCGTCCCTGAAAGTTTCTTCTTCTTCCGGCCGCCC
TGAAATGCGCCGTCCCAACTATAAGAAAATAGTTCTCCCAAACATCCACC
TCCCAGAACATGCCCGAGTCACTGTTCGATTTCCCCAGCATGAGTTCCCC
TATGCAGAACCCGTACACCCATCCACCCCTCGTGCCGAAGCGGGTTATTA
CTGGGGCTACTATGTGCGACGATGTCGATCTCACTCTTCCGTTTTTACGG
AATGTCCCTATGACGGTGGCTACGATCTCTCCTTCGGCACGTCCGAGCGT
GGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCACAACAAGCACATGA
TCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAATATCGCCAGACT
TCCAGCATATTCTTGTCGTCTTCGGTGGTGTCGCTGGGATTGAGGCAGCC
GTCCGGAACGATCCTCAACTCCGTGACATGGCCATCCGCCCATCCGATGC
TGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCGGACAGGGAAGCA
GAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGCTAACGAGTCTCCAA
GGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCATACCGATGTCATCA
CGACGGTTAGCGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCCGGTGTA
ATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGA
CGATAATGAATATGGCGCCCACTGTGATTATTATGACCATAGAGACTCCT
ATAACTCACCCATTGCCAAAAATAGAGACCAAGTTGATGGCGATACATCC
TCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCACTTCCTGACTCA
CGTTCTGTCGTATCTTGAGACTCCACCATATTTGCGCAAACATCTCTTCC
GCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTGGACATG
CCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGT
CGTTTCTAGTTCAGCGCGGAAAAATAACCCGGCCAGCAAGATCACTCAGA
TGAGCAAAGATATCCTTTCCACCGTCAGACGCAAGACTACCCATGAAGAT
AGTCCTCCTTCGCACCACAATGGCATAACCGGTCCCCTGTTCACCGAAAA
GCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCGATCGCATACACTCAGCG
TTGCCATTCCGGGCAGCATCATAACCAAATGAACAAGTGTTCGTCCCTGA
AAGTTTCTTCTTCTTCCGGCCGCCCTGAAATGCGCCGTCCCAACTATAAG
AAAATAGTTCTCCCAAACATCCACCTCCCAGAACATGCCCGAGTCACTGT
TCGATTTCCCCAGCATGAGTTCCCCTATGCAGAACCCGTACACCCATCCA
CCCCTCGTGCCGAAGCGGGTTATTACTGGGGCTACTATGTGCGACGATGT
CGATCTCACTCTTCCGTTTTTACGGAATGTCCCTATGACGGTGGCTACGA
TCTCTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAG
AGGAGAAGCCACAACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTT
TGTCGGGATCAAATATCGCCAGACTTCCAGCATATTCTTGTCGTCTTCGG
TGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTG
ACATGGCCATCCGCCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTA
AATTTCCTACCCGGACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGT
TTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGT
TGAGAAAGGCATACCGATGTCATCACGACGGTTAGCGCTCATTCCGTCGA
GCAAAAGACCTTCCTAGCCGGTGTAATCGCACGCGCCCTTGCCGTATTCT
GCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATATGGCGCCCACTGT
GATTATTATGACCATAGAGACTCCTATAACTCACCCATTGCCAAAAATAG
AGACCAAGTTGATGGCGATACATCCTCTCCAAAAGCCTATACCGCGAATT
CAGACCCCTCGCACTTCCTGACTCACGTTCTGTCGTATCTTGAGACTCCA
CCATATTTGCGCAAACATCTCTTCCGCATACATCCCAATCTTCGCACCGC
TGGATTGCTGCCCAGCTTGGACATGCCTCATCACTTGCGTGCCAACGAGT
GGTGCGACTTCCGTGAAGGCATTGTCGTTTCTAGTTCAGCGCGGAAAAAT
AACCCGGCCAGCAAGATCACTCAGATGAGCAAAGATATCCTTTCCACCGT
CAGACGCAAGACTACCCATGAAGATAGTCCTCCTTCGCACCACAATGGCA
TAACCGGTCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAG
GGTGGCCGATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAAC
CAAATGAACAAGTGTTCGTCCCTGAAAGTTTCTTCTTCTTCCGGCCGCCC
TGAAATGCGCCGTCCCAACTATAAGAAAATAGTTCTCCCAAACATCCACC
TCCCAGAACATGCCCGAGTCACTGTTCGATTTCCCCAGCATGAGTTCCCC
TATGCAGAACCCGTACACCCATCCACCCCTCGTGCCGAAGCGGGTTATTA
CTGGGGCTACTATGTGCGACGATGTCGATCTCACTCTTCCGTTTTTACGG
AATGTCCCTATGACGGTGGCTACGATCTCTCCTTCGGCACGTCCGAGCGT
GGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCACAACAAGCACATGA
TCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAATATCGCCAGACT
TCCAGCATATTCTTGTCGTCTTCGGTGGTGTCGCTGGGATTGAGGCAGCC
GTCCGGAACGATCCTCAACTCCGTGACATGGCCATCCGCCCATCCGATGC
TGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCGGACAGGGAAGCA
GAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGCTAACGAGTCTCCAA
GGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCATACCGATGTCATCA
CGACGGTTAGCGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCCGGTGTA
ATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGA
CGATAATGAATATGGCGCCCACTGTGATTATTATGACCATAGAGACTCCT
ATAACTCACCCATTGCCAAAAATAGAGACCAAGTTGATGGCGATACATCC
TCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCACTTCCTGACTCA
CGTTCTGTCGTATCTTGAGACTCCACCATATTTGCGCAAACATCTCTTCC
GCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTGGACATG
CCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGT
CGTTTCTAGTTCAGCGCGGAAAAATAACCCGGCCAGCAAGATCACTCAGA
TGAGCAAAGATATCCTTTCCACCGTCAGACGCAAGACTACCCATGAAGAT
AGTCCTCCTTCGCACCACAATGGCATAACCGGTCCCCTGTTCACCGAAAA
GCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCGATCGCATACACTCAGCG
TTGCCATTCCGGGCAGCATCATAACCAAATGAACAAGTGTTCGTCCCTGA
AAGTTTCTTCTTCTTCCGGCCGCCCTGAAATGCGCCGTCCCAACTATAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029028 |
| DBxref | InterPro:IPR003750 |
| DBxref | InterPro:IPR029026 |
| DBxref | PFAM:PF02598 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch2 | supercontig | ch2:1595430..1596902 - |
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