You are here

Home

KJC3_002073-T1, KJC3_002073-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002073-T1
Unique NameKJC3_002073-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1597143..1597934-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002073-T1 ID=KJC3_002073-T1|Name=KJC3_002073-T1|organism=Aspergillus niger KJC3|type=mRNA|length=792bp|location=Sequence derived from alignment at ch2:1597143..1597934- (Aspergillus niger KJC3)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCACTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACGGACGAGAAGACAGCTGAGGCGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTCAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGACCCGCGAGCA
GATCATAGCGGGTTCGGTACTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG
back to top

Coding sequence (CDS) from alignment at ch2:1597143..1597934-

>KJC3_002073-T1 ID=KJC3_002073-T1|Name=KJC3_002073-T1|organism=Aspergillus niger KJC3|type=CDS|length=792bp|location=Sequence derived from alignment at ch2:1597143..1597934- (Aspergillus niger KJC3)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCACTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACGGACGAGAAGACAGCTGAGGCGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTCAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGACCCGCGAGCA
GATCATAGCGGGTTCGGTACTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009264deoxyribonucleotide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004139deoxyribose-phosphate aldolase activity
GO:0003824catalytic activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002073KJC3_002073Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002073-T1.cdsKJC3_002073-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002073-T1.exon1KJC3_002073-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002073-T1KJC3_002073-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR028581
DBxrefInterPro:IPR011343
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR002915
DBxrefPFAM:PF01791
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1597143..1597934 -
Powered by Drupal