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KJC3_002084-T1, KJC3_002084-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002084-T1
Unique NameKJC3_002084-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1623643..1624831+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002084-T1 ID=KJC3_002084-T1|Name=KJC3_002084-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1189bp|location=Sequence derived from alignment at ch2:1623643..1624831+ (Aspergillus niger KJC3)
GCTACTGACTGTGAACTGTCCTACCTGAGAGCTCGTTGACTCGGCAAGAG
TCCAGGCGCATTTTGCTACACTTGACACCCAGCACTTCTTGATCTAGGCT
CTGAACATATTTTCTCCGTGTCCTACACTATGGCGGATTCTATGAACCCT
CCCCTCTCGTACGAGGCATCAGCCACAACTACTCATCCGCACGTCGGAAC
CACCCTCCCAACGGAGGTGATCTCATGTCTGAAGAATTCTCGATTCGTGA
GTATTGCGAATTCTATAGCCCTGTATGGTTATCAGGCTTAAAAGCTGATC
CTTTACGTCGCCAGCTTCATCTTGCAACATGTGATGGCTTGACCCCGCAC
ATCTCGCTCATGTCCTACACCTACCTCCCCTCGACTCCCTATGACCCGTA
TCCGACGATCATCATGACCACCAACCCCTCCTCTCGCAAAACCAACCATC
TGCTCACCAACCCTCGCGTGTCCCTTTTGGTCCATGACTGGGTTTCGCAC
CGTCCGCCTACCCGGGCTCCCAATCCCGATGGTCGCGAAGGGTCTCCCCC
ACCTGCAGCGACACGGTCATCCTTGGCGAGCCTGCTGTTGAACCTGAACA
CAAGTGCCCTTTCCAGTATCTCCACAACTATCGCCGGTACCGCGCGCTTT
CTGGAGCCTGGCTCTGAAGAGGAGGCTTGGTGCAAGAGACAACACTTGGA
GAACAACACCTTCGAGGAAGAGCTGGGCACTTTCGGGCAGCAGCTGCAAC
AGCAACCCGGTCAAAGAAGGCCCAGTATTTCAATTGACAGCGATGTCCGC
GTCGTAACCGTTCAGGTGCGCGAGGGCCGTATCGCAGACTGGAAGGGTGG
CGTGAGGGATTGGCAGTTGGTATCGGAGGGGGAGGGCACGGAGGGAACGA
TGGTTAATGGTATTGCTCCCGTGTAATGCTTGCTCGAATCTGTTCTATTC
TGTAAATCATAGTCTATGAGTGGAAATAACATTTTGGGAAATTGCAAGCA
AGCCTAGCTCCAGTCAGTCAGTCATCGGAAGGTTTCGGCGGACTCGGTTC
CTGAAGATCTCTGCAGACACGATCTCGCAGTCATGCTCCTGGACGAATAT
GGAAGTATCCGCTGCTGTACATAGAAAATTGAAAGCTACATGCAAACTCA
ATCTCAAATTAAGCTCTGGGGAGAGTGAAAGCAAAGCAC
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Coding sequence (CDS) from alignment at ch2:1623643..1624831+

>KJC3_002084-T1 ID=KJC3_002084-T1|Name=KJC3_002084-T1|organism=Aspergillus niger KJC3|type=CDS|length=1458bp|location=Sequence derived from alignment at ch2:1623643..1624831+ (Aspergillus niger KJC3)
ATGGCGGATTCTATGAACCCTCCCCTCTCGTACGAGGCATCAGCCACAAC
TACTCATCCGCACGTCGGAACCACCCTCCCAACGGAGGTGATCTCATGTC
TGAAGAATTCTCGATTCCTTCATCTTGCAACATGTGATGGCTTGACCCCG
CACATCTCGCTCATGTCCTACACCTACCTCCCCTCGACTCCCTATGACCC
GTATCCGACGATCATCATGACCACCAACCCCTCCTCTCGCAAAACCAACC
ATCTGCTCACCAACCCTCGCGTGTCCCTTTTGGTCCATGACTGGGTTTCG
CACCGTCCGCCTACCCGGGCTCCCAATCCCGATGGTCGCGAAGGGTCTCC
CCCACCTGCAGCGACACGGTCATCCTTGGCGAGCCTGCTGTTGAACCTGA
ACACAAGTGCCCTTTCCAGTATCTCCACAACTATCGCCGGTACCGCGCGC
TTTCTGGAGCCTGGCTCTGAAGAGGAGGCTTGGTGCAAGAGACAACACTT
GGAGAACAACACCTTCGAGGAAGAGCTGGGCACTTTCGGGCAGCAGCTGC
AACAGCAACCCGGTCAAAGAAGGCCCAGTATTTCAATTGACAGCGATGTC
CGCGTCGTAACCGTTCAGGTGCGCGAGGGCCGTATCGCAGACTGGAAGGG
TGGCGTGAGGGATTGGCAGTTGGTATCGGAGGGGGAGGGCACGGAGGGAA
CGATGGTTAATGGTATTGCTCCCGTGTAAATGGCGGATTCTATGAACCCT
CCCCTCTCGTACGAGGCATCAGCCACAACTACTCATCCGCACGTCGGAAC
CACCCTCCCAACGGAGGTGATCTCATGTCTGAAGAATTCTCGATTCCTTC
ATCTTGCAACATGTGATGGCTTGACCCCGCACATCTCGCTCATGTCCTAC
ACCTACCTCCCCTCGACTCCCTATGACCCGTATCCGACGATCATCATGAC
CACCAACCCCTCCTCTCGCAAAACCAACCATCTGCTCACCAACCCTCGCG
TGTCCCTTTTGGTCCATGACTGGGTTTCGCACCGTCCGCCTACCCGGGCT
CCCAATCCCGATGGTCGCGAAGGGTCTCCCCCACCTGCAGCGACACGGTC
ATCCTTGGCGAGCCTGCTGTTGAACCTGAACACAAGTGCCCTTTCCAGTA
TCTCCACAACTATCGCCGGTACCGCGCGCTTTCTGGAGCCTGGCTCTGAA
GAGGAGGCTTGGTGCAAGAGACAACACTTGGAGAACAACACCTTCGAGGA
AGAGCTGGGCACTTTCGGGCAGCAGCTGCAACAGCAACCCGGTCAAAGAA
GGCCCAGTATTTCAATTGACAGCGATGTCCGCGTCGTAACCGTTCAGGTG
CGCGAGGGCCGTATCGCAGACTGGAAGGGTGGCGTGAGGGATTGGCAGTT
GGTATCGGAGGGGGAGGGCACGGAGGGAACGATGGTTAATGGTATTGCTC
CCGTGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002084KJC3_002084Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002084-T1.utr5p1KJC3_002084-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002084-T1.exon1KJC3_002084-T1.exon1Aspergillus niger KJC3exon
KJC3_002084-T1.exon2KJC3_002084-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002084-T1.cdsKJC3_002084-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002084-T1.utr3p1KJC3_002084-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002084-T1KJC3_002084-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011576
DBxrefPFAM:PF01243
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1623643..1624831 +
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