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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1624882..1625977+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002085-T1 ID=KJC3_002085-T1|Name=KJC3_002085-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1096bp|location=Sequence derived from alignment at ch2:1624882..1625977+ (Aspergillus niger KJC3)
GTCAGTGACGTTCAATCTTATCGGACCGCAAGCTCCATGAAATTCACACG
AACTGACCGTCTAACATCTTGAACCCAATCCCTCCCTCACTCACTACCTT
CTCTAAACTCCTTCCTCGGAATACAATGCAAATACACCACCAACCCTACT
AACCACCACCGTCCCCAACCTACAAACTAGCCCTCTATAAAAAAAAAAAA
GAAAAAGATTCAAAATGCGCCTCGCCCACCTCCACCTCCCGGACATAACC
TCCTTCACCCGCGTCGCCAACCTCCAACAAACACTGACAAGCCGGCTCCT
CTCGCACAAAAAGCACCTCACCCCGAACCCCCCCGACCCAACCATAATAA
CCTTCAGCCCGAACCCAGTCTACACGACCGGACGCCGCGACCTCCCTCCC
TCCAACACCACCCACAGCAACAGCAATGGCAATGGCAACATACTCTCCCT
CCCGCCGAGCCTCGAACCAATCCGCCAGATCCTAACGCCCCCGCAACCCA
ACAAACCCTACGACCCCAAATCCCGGATAGCAGAATACCACCCCACCCTG
CGCGGCGGACAAACGACCTACCACGGACCGGGCCAACTAGTCGCGTACAC
GATTCTCGATCTACGGCGATTGGGACTCACCCCGCGGTGCCATATACGGT
TGTTGGAGAATAGTGTGATTGATGTGTTGAGGGAGTATGGGGTGAGGGGG
ATGGTTACGGAGGATCCGGGGGTTTGGGTGCATGATACCCATGGACAGAA
ACAGGGGGGAGGGGCTGGTGGGGGGAAGGGCGAGCTGCCGAAGAAAATCA
CGGCCGTGGGGGTACATCTCAGGAGACATATTAGTAGTTATGGGATTGGG
TTGAATGTGACGGAGGAGCCGATGTGGTGGTTTCGACAGATTGTGGCGTG
TGGGTTAGAGGGGAGGGAGACGACGAGTTTGCAGGGGCTGGGGGTGACAG
GGGTAACGGTTGAGGAGGTCGCGGGGATGTTTGTGGGGAAGTTTGTTGGG
AGGGTAAATGGGGATTTTGCCTGTGGGGATGGGGCTACCGGGGAGGGGAT
CGAGGAGGTGTATAGGGTGAGTGAGAAGGATTTGTTGAGGGAGTGA back to topCoding sequence (CDS) from alignment at ch2:1624882..1625977+ >KJC3_002085-T1 ID=KJC3_002085-T1|Name=KJC3_002085-T1|organism=Aspergillus niger KJC3|type=CDS|length=882bp|location=Sequence derived from alignment at ch2:1624882..1625977+ (Aspergillus niger KJC3)
ATGCGCCTCGCCCACCTCCACCTCCCGGACATAACCTCCTTCACCCGCGT
CGCCAACCTCCAACAAACACTGACAAGCCGGCTCCTCTCGCACAAAAAGC
ACCTCACCCCGAACCCCCCCGACCCAACCATAATAACCTTCAGCCCGAAC
CCAGTCTACACGACCGGACGCCGCGACCTCCCTCCCTCCAACACCACCCA
CAGCAACAGCAATGGCAATGGCAACATACTCTCCCTCCCGCCGAGCCTCG
AACCAATCCGCCAGATCCTAACGCCCCCGCAACCCAACAAACCCTACGAC
CCCAAATCCCGGATAGCAGAATACCACCCCACCCTGCGCGGCGGACAAAC
GACCTACCACGGACCGGGCCAACTAGTCGCGTACACGATTCTCGATCTAC
GGCGATTGGGACTCACCCCGCGGTGCCATATACGGTTGTTGGAGAATAGT
GTGATTGATGTGTTGAGGGAGTATGGGGTGAGGGGGATGGTTACGGAGGA
TCCGGGGGTTTGGGTGCATGATACCCATGGACAGAAACAGGGGGGAGGGG
CTGGTGGGGGGAAGGGCGAGCTGCCGAAGAAAATCACGGCCGTGGGGGTA
CATCTCAGGAGACATATTAGTAGTTATGGGATTGGGTTGAATGTGACGGA
GGAGCCGATGTGGTGGTTTCGACAGATTGTGGCGTGTGGGTTAGAGGGGA
GGGAGACGACGAGTTTGCAGGGGCTGGGGGTGACAGGGGTAACGGTTGAG
GAGGTCGCGGGGATGTTTGTGGGGAAGTTTGTTGGGAGGGTAAATGGGGA
TTTTGCCTGTGGGGATGGGGCTACCGGGGAGGGGATCGAGGAGGTGTATA
GGGTGAGTGAGAAGGATTTGTTGAGGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006464 | cellular protein modification process |
| GO:0009249 | protein lipoylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0033819 | lipoyl(octanoyl) transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002085-T1.utr5p1 | KJC3_002085-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264AWW |
| DBxref | InterPro:IPR020605 |
| DBxref | InterPro:IPR004143 |
| DBxref | InterPro:IPR000544 |
| DBxref | PFAM:PF03099 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1624882..1625977 + |
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