|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1628215..1631097+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002087-T1 ID=KJC3_002087-T1|Name=KJC3_002087-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2883bp|location=Sequence derived from alignment at ch2:1628215..1631097+ (Aspergillus niger KJC3)
CATGGAACCTGAATTGAACTTAGTATATATATATAGTACAGTAAGCATAC
TGTAGTAGTACTAGTAAGCCCGCGGCAATCATTGCGGAAGGTCATTGGAC
TGTCGTGCGTAGAAAAAGTCAAGTAGATAACTAGATCATAGATCCGACAG
TCACTTGAATAACTAACAGTCAATATCTGTTAGTAAACAAGCCTCAAGTC
CAGTGATGGTTGTATTATACTACTTAGAATGTGGTCTCGGTCGGGCCCGG
CGAGGAAGCTACAAAGGCGGGGAACTTCGAGACTTTGGCCCCAGGCTCCG
ATAGGCGCGGAAGCTCTCCATTCCTCGCTCACCTTCATCCTCTCCCATCT
CTTATCTCCATCGGTCTTCTAGCACGCAGTCGATCCTCGTTTACCTCTCT
GTTCTCGATATTTCTAGATACCCCAAATTGCGGCGAGGTTCAGTTCGTTC
ATAATGTCTGACGATGATGATTTCATGCAAGATTCGGGTGATGAGGAGTA
AGCCTGTGTTGTCCCTTCAACCTGCCGGTGTTCGCGGCCGCTAATCAGCT
GAACTATCACAGGTACGACTTCGAGTACGAAGATGCGGACGATGACGAAT
CGGGAGATGTCGGTATCGAGAACAAATACTATAATGCCAAACAGATGAAG
ATAGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATCT
AGAACAAGACAAGGGTGACTGGTAAGAGGCGTGGACGTCAGTGATGGTTC
AGACAAGGTGCTGACGGTAGCCAAGGGGGTTCAAAGGACTGAAGCAGGCT
ATCAAGTTGGAATTCAAGCTTGGGAGATATAGCGATGTAAGCGCCCCTTG
GCTCACTGATGATGTGATACTGACTCTTCAGGCCGTTGAACACTACAGAG
AGCTCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAAAG
TCCATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATGACAC
AGCTTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCC
AAAATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCA
CGTCTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCG
GGAGTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTA
AAGGAACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTATGCC
GAGACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCG
CGTTCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAAT
GCGGAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGC
GACTTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCG
AATCCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGG
ATATCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCC
CGCATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACGACAT
CCACGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATC
CCTTCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAG
GCTGTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGTTCAT
CTCGAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCT
TCCTGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGG
ATTGTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCA
GGAGTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACG
GGGAGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGA
GGGCCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACG
CGCTGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCG
GAGGGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGAGAGGGAAATGC
ATTGTTCCATCCAGTCATCCCACCAAACCATCTCTGCGTCATAGCCCATA
CAAGATAGAGAAACACACCGGGTTACGAAGTAAGGATAAGGAATGAAATC
ATGACACACAACATCCATCCATCCATCCATCCATCAATCAATCAATCATC
ACACCCTACAGACCAAACCAAAACAATGATATCATAGCATACCAATGCGC
ACGGCATCTAGATAGCCCATCCATAAGCCACCAAGACACTAGAATCACCA
AAAGGACCAGGGGGTGTGGCAGCGGACCATGGAACATGAAACTTTTTCCA
CCTTCCTCCAACCAGACTACAGTAAGTATGTAGGAGTCAAAGCACCAAGC
CACAAATTTCTATTCGTTTTTTTGTGTTCACCAGGCACAAGCACAACAGC
AAGATGCAGAGAGGTACTTTTGTCAATCACTCACACACAGACTCACACGG
ATAACTAAATCATGCTCTTCCTCCTCCCTAAGCCGGCTGACATTTAGTCA
AGTGAAGTAAGTAACACCCGGAAACCGTCTGACCAAATCACATACATTAA
TACATACATAGTACAACCCATACTCACACAACATCCTAGACAATAATAAA
TCAAGTAAAACCCCTGTTATCCCGAGGCGCCACAACCCTTTCCCCCCCTC
TCCCAATCGGCGTCGTGACAGGTCAAGTCAGGTTCATATCCCGGCTCGGG
TTTTGGTCCAGAGAACGAGGGACCATGTGGGAG back to topCoding sequence (CDS) from alignment at ch2:1628215..1631097+ >KJC3_002087-T1 ID=KJC3_002087-T1|Name=KJC3_002087-T1|organism=Aspergillus niger KJC3|type=CDS|length=1176bp|location=Sequence derived from alignment at ch2:1628215..1631097+ (Aspergillus niger KJC3)
ATGCTAGATTATATCGAGAAGGGTTCGGATGATGACACAGCTTACCAGTG
CATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCCAAAATACCAACA
ACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCACGTCTTTGGCTG
GAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCGGGAGTTGCATCG
GGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTAAAGGAACATATC
TCCTCGAACTATACGCCCTTGAGATACAGATGTATGCCGAGACGAAGAAT
AACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCGCGTTCGGTCGGC
GGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAATGCGGAGGGAAAA
TGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGCGACTTCTTCGAG
TCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCGAATCCAGGTGCT
CAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGGATATCAACCCAT
TTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCCCGCATATCCGCT
ATGACCGATCTAGTCGATGCATTCCAACGCGACGACATCCACGCCTACGA
AGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATCCCTTCATCGCCG
AGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAGGCTGTTCTCAAA
CTGATCGCACCGTACACACGATTCACCCTTAAGTTCATCTCGAAACACAT
CCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCTTCCTGATCCTGG
ACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGGATTGTGGAGGTT
GAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCAGGAGTGGAACGC
ATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACGGGGAGGGATTCA
GGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGAGGGCCCATGTTC
CAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACGCGCTGGTGGTCG
CCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCGGAGGGCCTGGAA
CGAAACTCGGCCTGGGAGGCGTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002087-T1.utr3p1 | KJC3_002087-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF01399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1628215..1631097 + |
|
