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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1628215..1631097+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002087-T3 ID=KJC3_002087-T3|Name=KJC3_002087-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2883bp|location=Sequence derived from alignment at ch2:1628215..1631097+ (Aspergillus niger KJC3)
CATGGAACCTGAATTGAACTTAGTATATATATATAGTACAGTAAGCATAC
TGTAGTAGTACTAGTAAGCCCGCGGCAATCATTGCGGAAGGTCATTGGAC
TGTCGTGCGTAGAAAAAGTCAAGTAGATAACTAGATCATAGATCCGACAG
TCACTTGAATAACTAACAGTCAATATCTGTTAGTAAACAAGCCTCAAGTC
CAGTGATGGTTGTATTATACTACTTAGAATGTGGTCTCGGTCGGGCCCGG
CGAGGAAGCTACAAAGGCGGGGAACTTCGAGACTTTGGCCCCAGGCTCCG
ATAGGCGCGGAAGCTCTCCATTCCTCGCTCACCTTCATCCTCTCCCATCT
CTTATCTCCATCGGTCTTCTAGCACGCAGTCGATCCTCGTTTACCTCTCT
GTTCTCGATATTTCTAGATACCCCAAATTGCGGCGAGGTTCAGTTCGTTC
ATAATGTCTGACGATGATGATTTCATGCAAGATTCGGGTGATGAGGAGTA
AGCCTGTGTTGTCCCTTCAACCTGCCGGTGTTCGCGGCCGCTAATCAGCT
GAACTATCACAGGTACGACTTCGAGTACGAAGATGCGGACGATGACGAAT
CGGGAGATGTCGGTATCGAGAACAAATACTATAATGCCAAACAGATGAAG
ATAGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATCT
AGAACAAGACAAGGGTGACTGGTAAGAGGCGTGGACGTCAGTGATGGTTC
AGACAAGGTGCTGACGGTAGCCAAGGGGGTTCAAAGGACTGAAGCAGGCT
ATCAAGTTGGAATTCAAGCTTGGGAGATATAGCGATGTAAGCGCCCCTTG
GCTCACTGATGATGTGATACTGACTCTTCAGGCCGTTGAACACTACAGAG
AGCTCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAAAG
TCCATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATGACAC
AGCTTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCC
AAAATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCA
CGTCTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCG
GGAGTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTA
AAGGAACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTATGCC
GAGACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCG
CGTTCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAAT
GCGGAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGC
GACTTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCG
AATCCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGG
ATATCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCC
CGCATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACGACAT
CCACGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATC
CCTTCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAG
GCTGTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGTTCAT
CTCGAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCT
TCCTGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGG
ATTGTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCA
GGAGTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACG
GGGAGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGA
GGGCCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACG
CGCTGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCG
GAGGGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGAGAGGGAAATGC
ATTGTTCCATCCAGTCATCCCACCAAACCATCTCTGCGTCATAGCCCATA
CAAGATAGAGAAACACACCGGGTTACGAAGTAAGGATAAGGAATGAAATC
ATGACACACAACATCCATCCATCCATCCATCCATCAATCAATCAATCATC
ACACCCTACAGACCAAACCAAAACAATGATATCATAGCATACCAATGCGC
ACGGCATCTAGATAGCCCATCCATAAGCCACCAAGACACTAGAATCACCA
AAAGGACCAGGGGGTGTGGCAGCGGACCATGGAACATGAAACTTTTTCCA
CCTTCCTCCAACCAGACTACAGTAAGTATGTAGGAGTCAAAGCACCAAGC
CACAAATTTCTATTCGTTTTTTTGTGTTCACCAGGCACAAGCACAACAGC
AAGATGCAGAGAGGTACTTTTGTCAATCACTCACACACAGACTCACACGG
ATAACTAAATCATGCTCTTCCTCCTCCCTAAGCCGGCTGACATTTAGTCA
AGTGAAGTAAGTAACACCCGGAAACCGTCTGACCAAATCACATACATTAA
TACATACATAGTACAACCCATACTCACACAACATCCTAGACAATAATAAA
TCAAGTAAAACCCCTGTTATCCCGAGGCGCCACAACCCTTTCCCCCCCTC
TCCCAATCGGCGTCGTGACAGGTCAAGTCAGGTTCATATCCCGGCTCGGG
TTTTGGTCCAGAGAACGAGGGACCATGTGGGAG back to topCoding sequence (CDS) from alignment at ch2:1628215..1631097+ >KJC3_002087-T3 ID=KJC3_002087-T3|Name=KJC3_002087-T3|organism=Aspergillus niger KJC3|type=CDS|length=4185bp|location=Sequence derived from alignment at ch2:1628215..1631097+ (Aspergillus niger KJC3)
ATGAAGATAGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCC
GGATCTAGAACAAGACAAGGGTGACTGGGGGTTCAAAGGACTGAAGCAGG
CTATCAAGTTGGAATTCAAGCTTGGGAGATATAGCGATGCCGTTGAACAC
TACAGAGAGCTCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTC
CGAAAAGTCCATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATG
ATGACACAGCTTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGC
TCATTCCAAAATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAA
GTTGGCACGTCTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGA
AGGTGCGGGAGTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGAT
CCGAGTAAAGGAACATATCTCCTCGAACTATACGCCCTTGAGATACAGAT
GTATGCCGAGACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTG
CCCTTCGCGTTCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATC
CGAGAATGCGGAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGC
GCAGAGCGACTTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAA
TACAGCGAATCCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATG
AAATCGGATATCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAA
CGACCCCCGCATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCG
ACGACATCCACGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTG
GCCGATCCCTTCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCG
GACGAAGGCTGTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTA
AGTTCATCTCGAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATC
CTGAGCTTCCTGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGA
AAACGGGATTGTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGG
CACTGCAGGAGTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTG
AACGACGGGGAGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAG
AGGTGGAGGGCCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAG
GATTACGCGCTGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGC
GGCGGCGGAGGGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGATGAA
GATAGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATC
TAGAACAAGACAAGGGTGACTGGGGGTTCAAAGGACTGAAGCAGGCTATC
AAGTTGGAATTCAAGCTTGGGAGATATAGCGATGCCGTTGAACACTACAG
AGAGCTCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAA
AGTCCATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATGAC
ACAGCTTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATT
CCAAAATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGG
CACGTCTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTG
CGGGAGTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAG
TAAAGGAACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTATG
CCGAGACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTT
CGCGTTCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGA
ATGCGGAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGA
GCGACTTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAG
CGAATCCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATC
GGATATCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACC
CCCGCATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACGAC
ATCCACGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGA
TCCCTTCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGA
AGGCTGTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGTTC
ATCTCGAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAG
CTTCCTGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACG
GGATTGTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTG
CAGGAGTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGA
CGGGGAGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTG
GAGGGCCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTA
CGCGCTGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGG
CGGAGGGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGATGAAGATAG
ACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATCTAGAA
CAAGACAAGGGTGACTGGGGGTTCAAAGGACTGAAGCAGGCTATCAAGTT
GGAATTCAAGCTTGGGAGATATAGCGATGCCGTTGAACACTACAGAGAGC
TCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAAAGTCC
ATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATGACACAGC
TTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCCAAA
ATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCACGT
CTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCGGGA
GTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTAAAG
GAACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTATGCCGAG
ACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCGCGT
TCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAATGCG
GAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGCGAC
TTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCGAAT
CCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGGATA
TCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCCCGC
ATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACGACATCCA
CGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATCCCT
TCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAGGCT
GTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGTTCATCTC
GAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCTTCC
TGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGGATT
GTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCAGGA
GTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACGGGG
AGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGAGGG
CCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACGCGC
TGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCGGAG
GGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002087-T3.utr5p1 | KJC3_002087-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF01399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1628215..1631097 + |
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