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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1680265..1681793+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002102-T1 ID=KJC3_002102-T1|Name=KJC3_002102-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1529bp|location=Sequence derived from alignment at ch2:1680265..1681793+ (Aspergillus niger KJC3)
ATGTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTCCCGTGCATGTCGGG
GCAGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGAGATTCCCCATACCT
TTTTCACGTATCAGTGGTGGGAGGACGAGGCCACCACTGTGTTCTGGGCC
TTCGATCCCCATGAGATCAAGCGGGTGATCCGATTCGGACTGTTTCGAGA
CAACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGATCCTCAAGCCATTA
CCGCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGATGGCATTTATCGAC
AATCTGTCCCATTATCAGAAGGTCGAGGAGATTATCCGACGATGTCAGAT
CTCCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCCTACCAAGCGAGATA
GTGACCTGCCCTCGATAGCAATAGCAGAAGCCATCGACACAGAGAGTCAT
CTTCATTTCACGCGAATATCGTTCGAGGAACTGGTCCGCTACTTCCTGGG
CTACCGAGCACCCTCGGTAGAGTGGTTTTTACAACAGCATACAGCGCTTT
ACATCCACCTGCTCAACTATCTGCAAATGTTCCCAGAGGAGCTGGGGAAG
TACAAGGAGGTTGAACAGGTACGTAATTGGCATGCTAGCATCATGCACCG
CTGCAAACGTGCTGACGCCGGAGCAGCATCTTCAGACTCGCAGCCCTTTT
GCCCACCGTGCCATAAACCGGTGCCTACACGCCATGAGACAGCCAGTACC
AGCCAGTCCGCCGTACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCAGC
AGCTATTCAAAGAGCATTTACCGAGTCTGAAGGCCATTCTGCTTGAGCTC
TCAGTACTAGGGGTACGGTTTACCCGAACATACGTCCACGCCCGAGAGAT
GAACTGGACGAAGCCATTTTCGGTCGAAATCCCCCTGCTAGATGAGTTGG
ATTTGACGAACCCAGCCCCAGCTCTCGATTTTGCCAAGACAACAACCGCT
GTCGACGAAGAGTACTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAACC
CGATGCCATAATCAAACGACTCCTTGTGCTATGGGAGCTACGCAGCCTGG
AAGTGTGGGAATGTTGCACGGGACTACCAGACATGATAGGCTACATTCAG
GAAATTGTCGAGGTACTATCTTTTCTGTGAGAGTGTATAACATGGAACCA
TATACTAACAACAGCAGGCCCTCTACACCTGCCGCAATTACCACTCCTTC
ACGTCGATACTCAGCGGTCTTTACAAGTACAGCACGTCCCACTCGACCTT
CACGCACACCGACAGCGCCACCAACCGGATGACGCTGACTCCGGTGCTGC
CCCCTGCACTAGCGTACCTGCTGGACCCGACAGAGAACTTTGTGGCCTAC
CGACAGGAGTTCCAAACATCGCCGGGCCTCCCTTTCCTCTTCCCGCACAT
TAGGGAGTACCAACAGCACGGCCCGCCAGCCCTGCACCAACTGTTCCAGC
AATTGCAACGTCAGGTACCCACCAACTAG back to topCoding sequence (CDS) from alignment at ch2:1680265..1681793+ >KJC3_002102-T1 ID=KJC3_002102-T1|Name=KJC3_002102-T1|organism=Aspergillus niger KJC3|type=CDS|length=4248bp|location=Sequence derived from alignment at ch2:1680265..1681793+ (Aspergillus niger KJC3)
ATGTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTCCCGTGCATGTCGGG
GCAGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGAGATTCCCCATACCT
TTTTCACGTATCAGTGGTGGGAGGACGAGGCCACCACTGTGTTCTGGGCC
TTCGATCCCCATGAGATCAAGCGGGTGATCCGATTCGGACTGTTTCGAGA
CAACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGATCCTCAAGCCATTA
CCGCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGATGGCATTTATCGAC
AATCTGTCCCATTATCAGAAGGTCGAGGAGATTATCCGACGATGTCAGAT
CTCCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCCTACCAAGCGAGATA
GTGACCTGCCCTCGATAGCAATAGCAGAAGCCATCGACACAGAGAGTCAT
CTTCATTTCACGCGAATATCGTTCGAGGAACTGGTCCGCTACTTCCTGGG
CTACCGAGCACCCTCGGTAGAGTGGTTTTTACAACAGCATACAGCGCTTT
ACATCCACCTGCTCAACTATCTGCAAATGTTCCCAGAGGAGCTGGGGAAG
TACAAGGAGGTTGAACAGCATCTTCAGACTCGCAGCCCTTTTGCCCACCG
TGCCATAAACCGGTGCCTACACGCCATGAGACAGCCAGTACCAGCCAGTC
CGCCGTACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCAGCAGCTATTC
AAAGAGCATTTACCGAGTCTGAAGGCCATTCTGCTTGAGCTCTCAGTACT
AGGGGTACGGTTTACCCGAACATACGTCCACGCCCGAGAGATGAACTGGA
CGAAGCCATTTTCGGTCGAAATCCCCCTGCTAGATGAGTTGGATTTGACG
AACCCAGCCCCAGCTCTCGATTTTGCCAAGACAACAACCGCTGTCGACGA
AGAGTACTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAACCCGATGCCA
TAATCAAACGACTCCTTGTGCTATGGGAGCTACGCAGCCTGGAAGTGTGG
GAATGTTGCACGGGACTACCAGACATGATAGGCTACATTCAGGAAATTGT
CGAGGCCCTCTACACCTGCCGCAATTACCACTCCTTCACGTCGATACTCA
GCGGTCTTTACAAGTACAGCACGTCCCACTCGACCTTCACGCACACCGAC
AGCGCCACCAACCGGATGACGCTGACTCCGGTGCTGCCCCCTGCACTAGC
GTACCTGCTGGACCCGACAGAGAACTTTGTGGCCTACCGACAGGAGTTCC
AAACATCGCCGGGCCTCCCTTTCCTCTTCCCGCACATTAGGGAGTACCAA
CAGCACGGCCCGCCAGCCCTGCACCAACTGTTCCAGCAATTGCAACGTCA
GGTACCCACCAACTAGATGTCTGCGTATTCACCTTCGGCCGGCGTGCCGT
TCCCGTGCATGTCGGGGCAGCCTTCCTACCTGGAACTGTTTCCCTCGGGC
GAGATTCCCCATACCTTTTTCACGTATCAGTGGTGGGAGGACGAGGCCAC
CACTGTGTTCTGGGCCTTCGATCCCCATGAGATCAAGCGGGTGATCCGAT
TCGGACTGTTTCGAGACAACAACCTCCCGCGGAAGTCTCTTCAGAAACGC
GATCCTCAAGCCATTACCGCGTTCCTGTACTCGCTCGTGGAGCCGCATGA
GATGGCATTTATCGACAATCTGTCCCATTATCAGAAGGTCGAGGAGATTA
TCCGACGATGTCAGATCTCCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTT
CCTACCAAGCGAGATAGTGACCTGCCCTCGATAGCAATAGCAGAAGCCAT
CGACACAGAGAGTCATCTTCATTTCACGCGAATATCGTTCGAGGAACTGG
TCCGCTACTTCCTGGGCTACCGAGCACCCTCGGTAGAGTGGTTTTTACAA
CAGCATACAGCGCTTTACATCCACCTGCTCAACTATCTGCAAATGTTCCC
AGAGGAGCTGGGGAAGTACAAGGAGGTTGAACAGCATCTTCAGACTCGCA
GCCCTTTTGCCCACCGTGCCATAAACCGGTGCCTACACGCCATGAGACAG
CCAGTACCAGCCAGTCCGCCGTACCCGGGCTTCCAGTTCATAGCAGCGCC
TATCCAGCAGCTATTCAAAGAGCATTTACCGAGTCTGAAGGCCATTCTGC
TTGAGCTCTCAGTACTAGGGGTACGGTTTACCCGAACATACGTCCACGCC
CGAGAGATGAACTGGACGAAGCCATTTTCGGTCGAAATCCCCCTGCTAGA
TGAGTTGGATTTGACGAACCCAGCCCCAGCTCTCGATTTTGCCAAGACAA
CAACCGCTGTCGACGAAGAGTACTTCTCAGGACTGAGCCATAAAAGCTTC
GTGGAACCCGATGCCATAATCAAACGACTCCTTGTGCTATGGGAGCTACG
CAGCCTGGAAGTGTGGGAATGTTGCACGGGACTACCAGACATGATAGGCT
ACATTCAGGAAATTGTCGAGGCCCTCTACACCTGCCGCAATTACCACTCC
TTCACGTCGATACTCAGCGGTCTTTACAAGTACAGCACGTCCCACTCGAC
CTTCACGCACACCGACAGCGCCACCAACCGGATGACGCTGACTCCGGTGC
TGCCCCCTGCACTAGCGTACCTGCTGGACCCGACAGAGAACTTTGTGGCC
TACCGACAGGAGTTCCAAACATCGCCGGGCCTCCCTTTCCTCTTCCCGCA
CATTAGGGAGTACCAACAGCACGGCCCGCCAGCCCTGCACCAACTGTTCC
AGCAATTGCAACGTCAGGTACCCACCAACTAGATGTCTGCGTATTCACCT
TCGGCCGGCGTGCCGTTCCCGTGCATGTCGGGGCAGCCTTCCTACCTGGA
ACTGTTTCCCTCGGGCGAGATTCCCCATACCTTTTTCACGTATCAGTGGT
GGGAGGACGAGGCCACCACTGTGTTCTGGGCCTTCGATCCCCATGAGATC
AAGCGGGTGATCCGATTCGGACTGTTTCGAGACAACAACCTCCCGCGGAA
GTCTCTTCAGAAACGCGATCCTCAAGCCATTACCGCGTTCCTGTACTCGC
TCGTGGAGCCGCATGAGATGGCATTTATCGACAATCTGTCCCATTATCAG
AAGGTCGAGGAGATTATCCGACGATGTCAGATCTCCGGTCCTCCTCTCGA
GCCTTGGAGCTGGCTTCCTACCAAGCGAGATAGTGACCTGCCCTCGATAG
CAATAGCAGAAGCCATCGACACAGAGAGTCATCTTCATTTCACGCGAATA
TCGTTCGAGGAACTGGTCCGCTACTTCCTGGGCTACCGAGCACCCTCGGT
AGAGTGGTTTTTACAACAGCATACAGCGCTTTACATCCACCTGCTCAACT
ATCTGCAAATGTTCCCAGAGGAGCTGGGGAAGTACAAGGAGGTTGAACAG
CATCTTCAGACTCGCAGCCCTTTTGCCCACCGTGCCATAAACCGGTGCCT
ACACGCCATGAGACAGCCAGTACCAGCCAGTCCGCCGTACCCGGGCTTCC
AGTTCATAGCAGCGCCTATCCAGCAGCTATTCAAAGAGCATTTACCGAGT
CTGAAGGCCATTCTGCTTGAGCTCTCAGTACTAGGGGTACGGTTTACCCG
AACATACGTCCACGCCCGAGAGATGAACTGGACGAAGCCATTTTCGGTCG
AAATCCCCCTGCTAGATGAGTTGGATTTGACGAACCCAGCCCCAGCTCTC
GATTTTGCCAAGACAACAACCGCTGTCGACGAAGAGTACTTCTCAGGACT
GAGCCATAAAAGCTTCGTGGAACCCGATGCCATAATCAAACGACTCCTTG
TGCTATGGGAGCTACGCAGCCTGGAAGTGTGGGAATGTTGCACGGGACTA
CCAGACATGATAGGCTACATTCAGGAAATTGTCGAGGCCCTCTACACCTG
CCGCAATTACCACTCCTTCACGTCGATACTCAGCGGTCTTTACAAGTACA
GCACGTCCCACTCGACCTTCACGCACACCGACAGCGCCACCAACCGGATG
ACGCTGACTCCGGTGCTGCCCCCTGCACTAGCGTACCTGCTGGACCCGAC
AGAGAACTTTGTGGCCTACCGACAGGAGTTCCAAACATCGCCGGGCCTCC
CTTTCCTCTTCCCGCACATTAGGGAGTACCAACAGCACGGCCCGCCAGCC
CTGCACCAACTGTTCCAGCAATTGCAACGTCAGGTACCCACCAACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005085 | guanyl-nucleotide exchange factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023578 |
| DBxref | InterPro:IPR036964 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1680265..1681793 + |
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