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KJC3_002104-T1, KJC3_002104-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002104-T1
Unique NameKJC3_002104-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1683989..1685993+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002104-T1 ID=KJC3_002104-T1|Name=KJC3_002104-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2005bp|location=Sequence derived from alignment at ch2:1683989..1685993+ (Aspergillus niger KJC3)
CATCCATCAACCGTGAAAATGGCCGTGGCATCTCCCCTATCCTTCTACAT
GGTGCTCTTCATCCCTCAGTGATCATCCCCTGAATGGGTGTATGGGTGCC
CCGCCATGGATTCCACCGGCTCCTATACCCGCTCCTTCGACGAATCCTTG
ATTCGCGAACTACCCCAGCTTCAGTCTCTCCGCATTGCTCCCCTCCGTCA
GCCGGTGTCTCGCCTCTTGGCCGTGCCCTCCCCGCTCGAACCCAGTGCCA
GTCACGTCCGAGAACCCTCCAGTAACAACAATGCCGGCATCCTCCCTGCC
CGCAATGACTCGGCCCCATCTGGAGCCACCGAAGGGGCAGCTGCTCCCCG
ACCGAAGAAGTCGGATGCCCCTGCGGACTCCCTCCCGAGCCTGGAGGCGC
CTCCCCGGCCAATTCTCCCGGCTTTTGTCAACCTCCGCGCCCTAGAACGA
TACCCCTACTCCTCGTTTGATGACGACGCCCTTCACTTCCGCAAGCGCAG
GCGTTTGGGCGGTCAGGCGGAGACGTTTAGTGAACATCTCCAGCTGCCCA
TTCCCCAGGCGCAGAAGGAGCAGCGTCCGCCGCCCTTTGGCCCTTTTGCT
ATTCTCAATGGTCTCAACGAGCCACCTCCAAATGCGGCCTTGCTTCCTCC
AATTGAACCCGGCTCGATCACGCAGCTACTAACCAAACCATCCCGAGGCA
GTGAGGCTGTGGAGCCGGGCTTACTTACTGCTAATGCTGCAGATAGCCAG
ATTGCGGAGCGACGAGAAGGTCGCATCGAGGATATCCTTGATTCTCCGGT
CGACAAAACGGCGGACGGCGATTCGAGCGATATCGCCAGTGGGCTGCTGG
ACGATGTTGCTGCCGCGGAACGGACAAGATCCGAAAAGACAGACCCCGAG
ACTGACAATAAAGACGCCTCCACAGAGGACAATACCGAGCCTCTGTCGCC
TAAAACGCGGGGCCGGTCTCGCAAGAACCTTCGTAAGTGGACCGAGGAAG
AGACGACTGCTCTGCTGCGCGGGGTGGTCAAGTGCGGCATCGGCAATTGG
ACGGCGATTCTGGCCCAGCCAGAGTTGAAGTTCAACAAGCGTAGCGCATC
CAATCTGAAAGATAGGTATGGTATAGCCATGGGTGGACGTGGAGGAGACA
CTGGATGCCAACTAAGTATAATTTAGGTTTCGTGTGTGTTGCCCCTGGGC
ATATCGGTAAGTCAGACGCAACTGTCGGCTGTGCACATCTAATCTTCCAA
GGGCCGCGGATCCCAATGAAGCCACCAGGCAGCTGCATGACACGCTTGCG
AACGCCCTCTCGCGAGCCGAAACCGAAGGGACCGACGGACAAGCGGGGAA
GATCCATCTCCCACACCCGCGGGGTGCTAATGCAGAGGCCAGTGGCGCTG
CGGTGAATGAGGCCAGCAGCTCCAAGGACGCTGACTCGAAAGGCAGCAAG
GCCAAGAATAGCACCTTGTCAAAGACTACCCCCACGCTCTCTAGTAGATC
CAAATCCACGCTGGCGTCGTTGGGCATCCCCGAGCCACACTTTACGATGA
AATCGCGGCGACGCTCACGCCGCCCGTTTACCGTCGTCGAGGACGAGGCA
CTGCTGAAAGGCTACGCCGTGCATGGCTTCCAGTGGACGCTGATCCAGCA
GGACAAGCGACTGAACCTGAGCCATCGCCGGGCGACGGACCTGCGAGACC
GATTTCGGACCAAGTTCCCGCACGCCTACCGGGACGGAGGGTCCGTGAGC
GGACGGTTGCCCCAGGGGGGGAATCCCGACCCTGGCAAACAGCATGCTGC
ACGGATATCTGCTCGCGGGCAGGCGGAGAGCGGCAATGCGCGCGGGCCAA
TTGATCCTGCGCTGTCGCCTCCAGCCCCGCCGCAGGGGCTCCACGAGAGC
ACGAGCAGTGCGGGGGTATTTTCGTTTGCGATGGACGAGAATTCGGGAGT
GGATGCGACATGGGCAGATAATACCTTGGCGCCGATGTGGGATGAGCTTA
CATAG
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Coding sequence (CDS) from alignment at ch2:1683989..1685993+

>KJC3_002104-T1 ID=KJC3_002104-T1|Name=KJC3_002104-T1|organism=Aspergillus niger KJC3|type=CDS|length=5382bp|location=Sequence derived from alignment at ch2:1683989..1685993+ (Aspergillus niger KJC3)
ATGGATTCCACCGGCTCCTATACCCGCTCCTTCGACGAATCCTTGATTCG
CGAACTACCCCAGCTTCAGTCTCTCCGCATTGCTCCCCTCCGTCAGCCGG
TGTCTCGCCTCTTGGCCGTGCCCTCCCCGCTCGAACCCAGTGCCAGTCAC
GTCCGAGAACCCTCCAGTAACAACAATGCCGGCATCCTCCCTGCCCGCAA
TGACTCGGCCCCATCTGGAGCCACCGAAGGGGCAGCTGCTCCCCGACCGA
AGAAGTCGGATGCCCCTGCGGACTCCCTCCCGAGCCTGGAGGCGCCTCCC
CGGCCAATTCTCCCGGCTTTTGTCAACCTCCGCGCCCTAGAACGATACCC
CTACTCCTCGTTTGATGACGACGCCCTTCACTTCCGCAAGCGCAGGCGTT
TGGGCGGTCAGGCGGAGACGTTTAGTGAACATCTCCAGCTGCCCATTCCC
CAGGCGCAGAAGGAGCAGCGTCCGCCGCCCTTTGGCCCTTTTGCTATTCT
CAATGGTCTCAACGAGCCACCTCCAAATGCGGCCTTGCTTCCTCCAATTG
AACCCGGCTCGATCACGCAGCTACTAACCAAACCATCCCGAGGCAGTGAG
GCTGTGGAGCCGGGCTTACTTACTGCTAATGCTGCAGATAGCCAGATTGC
GGAGCGACGAGAAGGTCGCATCGAGGATATCCTTGATTCTCCGGTCGACA
AAACGGCGGACGGCGATTCGAGCGATATCGCCAGTGGGCTGCTGGACGAT
GTTGCTGCCGCGGAACGGACAAGATCCGAAAAGACAGACCCCGAGACTGA
CAATAAAGACGCCTCCACAGAGGACAATACCGAGCCTCTGTCGCCTAAAA
CGCGGGGCCGGTCTCGCAAGAACCTTCGTAAGTGGACCGAGGAAGAGACG
ACTGCTCTGCTGCGCGGGGTGGTCAAGTGCGGCATCGGCAATTGGACGGC
GATTCTGGCCCAGCCAGAGTTGAAGTTCAACAAGCGTAGCGCATCCAATC
TGAAAGATAGGTTTCGTGTGTGTTGCCCCTGGGCATATCGGGCCGCGGAT
CCCAATGAAGCCACCAGGCAGCTGCATGACACGCTTGCGAACGCCCTCTC
GCGAGCCGAAACCGAAGGGACCGACGGACAAGCGGGGAAGATCCATCTCC
CACACCCGCGGGGTGCTAATGCAGAGGCCAGTGGCGCTGCGGTGAATGAG
GCCAGCAGCTCCAAGGACGCTGACTCGAAAGGCAGCAAGGCCAAGAATAG
CACCTTGTCAAAGACTACCCCCACGCTCTCTAGTAGATCCAAATCCACGC
TGGCGTCGTTGGGCATCCCCGAGCCACACTTTACGATGAAATCGCGGCGA
CGCTCACGCCGCCCGTTTACCGTCGTCGAGGACGAGGCACTGCTGAAAGG
CTACGCCGTGCATGGCTTCCAGTGGACGCTGATCCAGCAGGACAAGCGAC
TGAACCTGAGCCATCGCCGGGCGACGGACCTGCGAGACCGATTTCGGACC
AAGTTCCCGCACGCCTACCGGGACGGAGGGTCCGTGAGCGGACGGTTGCC
CCAGGGGGGGAATCCCGACCCTGGCAAACAGCATGCTGCACGGATATCTG
CTCGCGGGCAGGCGGAGAGCGGCAATGCGCGCGGGCCAATTGATCCTGCG
CTGTCGCCTCCAGCCCCGCCGCAGGGGCTCCACGAGAGCACGAGCAGTGC
GGGGGTATTTTCGTTTGCGATGGACGAGAATTCGGGAGTGGATGCGACAT
GGGCAGATAATACCTTGGCGCCGATGTGGGATGAGCTTACATAGATGGAT
TCCACCGGCTCCTATACCCGCTCCTTCGACGAATCCTTGATTCGCGAACT
ACCCCAGCTTCAGTCTCTCCGCATTGCTCCCCTCCGTCAGCCGGTGTCTC
GCCTCTTGGCCGTGCCCTCCCCGCTCGAACCCAGTGCCAGTCACGTCCGA
GAACCCTCCAGTAACAACAATGCCGGCATCCTCCCTGCCCGCAATGACTC
GGCCCCATCTGGAGCCACCGAAGGGGCAGCTGCTCCCCGACCGAAGAAGT
CGGATGCCCCTGCGGACTCCCTCCCGAGCCTGGAGGCGCCTCCCCGGCCA
ATTCTCCCGGCTTTTGTCAACCTCCGCGCCCTAGAACGATACCCCTACTC
CTCGTTTGATGACGACGCCCTTCACTTCCGCAAGCGCAGGCGTTTGGGCG
GTCAGGCGGAGACGTTTAGTGAACATCTCCAGCTGCCCATTCCCCAGGCG
CAGAAGGAGCAGCGTCCGCCGCCCTTTGGCCCTTTTGCTATTCTCAATGG
TCTCAACGAGCCACCTCCAAATGCGGCCTTGCTTCCTCCAATTGAACCCG
GCTCGATCACGCAGCTACTAACCAAACCATCCCGAGGCAGTGAGGCTGTG
GAGCCGGGCTTACTTACTGCTAATGCTGCAGATAGCCAGATTGCGGAGCG
ACGAGAAGGTCGCATCGAGGATATCCTTGATTCTCCGGTCGACAAAACGG
CGGACGGCGATTCGAGCGATATCGCCAGTGGGCTGCTGGACGATGTTGCT
GCCGCGGAACGGACAAGATCCGAAAAGACAGACCCCGAGACTGACAATAA
AGACGCCTCCACAGAGGACAATACCGAGCCTCTGTCGCCTAAAACGCGGG
GCCGGTCTCGCAAGAACCTTCGTAAGTGGACCGAGGAAGAGACGACTGCT
CTGCTGCGCGGGGTGGTCAAGTGCGGCATCGGCAATTGGACGGCGATTCT
GGCCCAGCCAGAGTTGAAGTTCAACAAGCGTAGCGCATCCAATCTGAAAG
ATAGGTTTCGTGTGTGTTGCCCCTGGGCATATCGGGCCGCGGATCCCAAT
GAAGCCACCAGGCAGCTGCATGACACGCTTGCGAACGCCCTCTCGCGAGC
CGAAACCGAAGGGACCGACGGACAAGCGGGGAAGATCCATCTCCCACACC
CGCGGGGTGCTAATGCAGAGGCCAGTGGCGCTGCGGTGAATGAGGCCAGC
AGCTCCAAGGACGCTGACTCGAAAGGCAGCAAGGCCAAGAATAGCACCTT
GTCAAAGACTACCCCCACGCTCTCTAGTAGATCCAAATCCACGCTGGCGT
CGTTGGGCATCCCCGAGCCACACTTTACGATGAAATCGCGGCGACGCTCA
CGCCGCCCGTTTACCGTCGTCGAGGACGAGGCACTGCTGAAAGGCTACGC
CGTGCATGGCTTCCAGTGGACGCTGATCCAGCAGGACAAGCGACTGAACC
TGAGCCATCGCCGGGCGACGGACCTGCGAGACCGATTTCGGACCAAGTTC
CCGCACGCCTACCGGGACGGAGGGTCCGTGAGCGGACGGTTGCCCCAGGG
GGGGAATCCCGACCCTGGCAAACAGCATGCTGCACGGATATCTGCTCGCG
GGCAGGCGGAGAGCGGCAATGCGCGCGGGCCAATTGATCCTGCGCTGTCG
CCTCCAGCCCCGCCGCAGGGGCTCCACGAGAGCACGAGCAGTGCGGGGGT
ATTTTCGTTTGCGATGGACGAGAATTCGGGAGTGGATGCGACATGGGCAG
ATAATACCTTGGCGCCGATGTGGGATGAGCTTACATAGATGGATTCCACC
GGCTCCTATACCCGCTCCTTCGACGAATCCTTGATTCGCGAACTACCCCA
GCTTCAGTCTCTCCGCATTGCTCCCCTCCGTCAGCCGGTGTCTCGCCTCT
TGGCCGTGCCCTCCCCGCTCGAACCCAGTGCCAGTCACGTCCGAGAACCC
TCCAGTAACAACAATGCCGGCATCCTCCCTGCCCGCAATGACTCGGCCCC
ATCTGGAGCCACCGAAGGGGCAGCTGCTCCCCGACCGAAGAAGTCGGATG
CCCCTGCGGACTCCCTCCCGAGCCTGGAGGCGCCTCCCCGGCCAATTCTC
CCGGCTTTTGTCAACCTCCGCGCCCTAGAACGATACCCCTACTCCTCGTT
TGATGACGACGCCCTTCACTTCCGCAAGCGCAGGCGTTTGGGCGGTCAGG
CGGAGACGTTTAGTGAACATCTCCAGCTGCCCATTCCCCAGGCGCAGAAG
GAGCAGCGTCCGCCGCCCTTTGGCCCTTTTGCTATTCTCAATGGTCTCAA
CGAGCCACCTCCAAATGCGGCCTTGCTTCCTCCAATTGAACCCGGCTCGA
TCACGCAGCTACTAACCAAACCATCCCGAGGCAGTGAGGCTGTGGAGCCG
GGCTTACTTACTGCTAATGCTGCAGATAGCCAGATTGCGGAGCGACGAGA
AGGTCGCATCGAGGATATCCTTGATTCTCCGGTCGACAAAACGGCGGACG
GCGATTCGAGCGATATCGCCAGTGGGCTGCTGGACGATGTTGCTGCCGCG
GAACGGACAAGATCCGAAAAGACAGACCCCGAGACTGACAATAAAGACGC
CTCCACAGAGGACAATACCGAGCCTCTGTCGCCTAAAACGCGGGGCCGGT
CTCGCAAGAACCTTCGTAAGTGGACCGAGGAAGAGACGACTGCTCTGCTG
CGCGGGGTGGTCAAGTGCGGCATCGGCAATTGGACGGCGATTCTGGCCCA
GCCAGAGTTGAAGTTCAACAAGCGTAGCGCATCCAATCTGAAAGATAGGT
TTCGTGTGTGTTGCCCCTGGGCATATCGGGCCGCGGATCCCAATGAAGCC
ACCAGGCAGCTGCATGACACGCTTGCGAACGCCCTCTCGCGAGCCGAAAC
CGAAGGGACCGACGGACAAGCGGGGAAGATCCATCTCCCACACCCGCGGG
GTGCTAATGCAGAGGCCAGTGGCGCTGCGGTGAATGAGGCCAGCAGCTCC
AAGGACGCTGACTCGAAAGGCAGCAAGGCCAAGAATAGCACCTTGTCAAA
GACTACCCCCACGCTCTCTAGTAGATCCAAATCCACGCTGGCGTCGTTGG
GCATCCCCGAGCCACACTTTACGATGAAATCGCGGCGACGCTCACGCCGC
CCGTTTACCGTCGTCGAGGACGAGGCACTGCTGAAAGGCTACGCCGTGCA
TGGCTTCCAGTGGACGCTGATCCAGCAGGACAAGCGACTGAACCTGAGCC
ATCGCCGGGCGACGGACCTGCGAGACCGATTTCGGACCAAGTTCCCGCAC
GCCTACCGGGACGGAGGGTCCGTGAGCGGACGGTTGCCCCAGGGGGGGAA
TCCCGACCCTGGCAAACAGCATGCTGCACGGATATCTGCTCGCGGGCAGG
CGGAGAGCGGCAATGCGCGCGGGCCAATTGATCCTGCGCTGTCGCCTCCA
GCCCCGCCGCAGGGGCTCCACGAGAGCACGAGCAGTGCGGGGGTATTTTC
GTTTGCGATGGACGAGAATTCGGGAGTGGATGCGACATGGGCAGATAATA
CCTTGGCGCCGATGTGGGATGAGCTTACATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002104KJC3_002104Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002104-T1.utr5p1KJC3_002104-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002104-T1.exon1KJC3_002104-T1.exon1Aspergillus niger KJC3exon
KJC3_002104-T1.exon2KJC3_002104-T1.exon2Aspergillus niger KJC3exon
KJC3_002104-T1.exon3KJC3_002104-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002104-T1.cdsKJC3_002104-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002104-T1KJC3_002104-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1683989..1685993 +
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