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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1686450..1687056- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002105-T1 ID=KJC3_002105-T1|Name=KJC3_002105-T1|organism=Aspergillus niger KJC3|type=mRNA|length=607bp|location=Sequence derived from alignment at ch2:1686450..1687056- (Aspergillus niger KJC3)
ATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACGG
TCCTCCCGAAAACTTCCTCGAGATAGAAGTACCAACCCCCCTCCTCCCCC
AATACCCTCCCTCCCCCTTCCACCCAACCCCCTTAAACTAACATCCACCC
CCCTAAAAAACCGCAGGTTAGGAATCCCCAAACGCACGGCACCTCGCGCA
ACATGTACACCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCATTC
AAACTCAAACATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACTT
CCGGGATATACTGGAGCGGGAATCGACGAGGGTCACGATCCCGCCGTTAC
CGGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAGA
CGGGAGGGGTTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTTT
GCAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAGGGTATGTTTTTCT
CTTTCAGAACTTTTCTTGGTTGTTCTTTTGGGGGTGGGGTGGGGTGAATG
TGCTAACGCTAATGGGGTTTTTGTGTAGATCCGAATTGGGATCGGAATGC
GTGGTAA back to topCoding sequence (CDS) from alignment at ch2:1686450..1687056- >KJC3_002105-T1 ID=KJC3_002105-T1|Name=KJC3_002105-T1|organism=Aspergillus niger KJC3|type=CDS|length=1287bp|location=Sequence derived from alignment at ch2:1686450..1687056- (Aspergillus niger KJC3)
ATCCGAATTGGGATCGGAATGCGTGGTAAGTTAGGAATCCCCAAACGCAC
GGCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGCCGGACAAA
CATCCCCGCATTCAAACTCAAACATTCCGTCGTGCGCCGCCGATACTCCG
ACTTCGAGTACTTCCGGGATATACTGGAGCGGGAATCGACGAGGGTCACG
ATCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGT
GATTGAGCATAGACGGGAGGGGTTGCAGCGGTTTTTGCAGATTGTCGCCG
GTCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAG
GATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACG
GTCCTCCCGAAAACTTCCTCGAGATAGAAATCCGAATTGGGATCGGAATG
CGTGGTAAGTTAGGAATCCCCAAACGCACGGCACCTCGCGCAACATGTAC
ACCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCATTCAAACTCAA
ACATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACTTCCGGGATA
TACTGGAGCGGGAATCGACGAGGGTCACGATCCCGCCGTTACCGGGGAAG
GTGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAGACGGGAGGG
GTTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTTTGCAGACGG
GGAGTAAGGTTTTGGCCAGTTTTGTGCAGGATGCAAGCCGTCCCGGAATC
CCGCCAACAAACCTTCGAGGAGATCTACGGTCCTCCCGAAAACTTCCTCG
AGATAGAAATCCGAATTGGGATCGGAATGCGTGGTAAGTTAGGAATCCCC
AAACGCACGGCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGC
CGGACAAACATCCCCGCATTCAAACTCAAACATTCCGTCGTGCGCCGCCG
ATACTCCGACTTCGAGTACTTCCGGGATATACTGGAGCGGGAATCGACGA
GGGTCACGATCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCT
GATGATGTGATTGAGCATAGACGGGAGGGGTTGCAGCGGTTTTTGCAGAT
TGTCGCCGGTCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTT
TTGTGCAGGATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGA
GATCTACGGTCCTCCCGAAAACTTCCTCGAGATAGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0032266 | phosphatidylinositol-3-phosphate binding |
| GO:0035091 | phosphatidylinositol binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042138 |
| DBxref | InterPro:IPR036871 |
| DBxref | InterPro:IPR001683 |
| DBxref | PFAM:PF00787 |
| Product | Sorting nexin-3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1686450..1687056 - |
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