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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1693245..1696466- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002108-T2 ID=KJC3_002108-T2|Name=KJC3_002108-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3222bp|location=Sequence derived from alignment at ch2:1693245..1696466- (Aspergillus niger KJC3)
CGCAGAACCAAGGACTTCTACAAATATTAGACCTTGCTTGCCAAAGCAAT
CTTCTTCTTTCCTTTTTTCAAAACCGCTCTCTTTAATATCTGTGTACCTG
TCAGCGATACAGCGGAGGATTCCTTCTGACATTTACTTGACCTCATCTCG
TCTTTTGTGTTTGCTTCTTTCTATTCTTAGCCTACCACACCCTGAATTAT
ATTGTTTCCTTTACATCACGCAAGAGTTAACAATATTTATCGATGGGAGA
TGACACGGGAAACGGCAGAAATGCTTTCTTCCAAGGCCATTGGCCAGGCT
TTCCCACTCAACCACGCCAAGGGAATTACCTGGTACCCGGTCTTCATCCC
TATGCCCCCTCATCAGTCAGTCAATGGATGAATAGATTGCGCTTCGTCGT
TTCAGAGACTAACATTTTTGGCATAAAGCAGTATGCTCCATCCTCACCGT
ACTCGCCAGTATCGACCTCGAGAAGTATGAGTCCAATCGATGGCCTGCAC
CTAGATACGAGCTTCCTCACAGACAGATCAATGAACGACCTGGCAGGTAT
GCAGATGACAGACAATGGCATACAGGGACTACCTGTGGGCGAGGATGACG
TATTGTCACTGGTAGTCCCTCCTATGTGTCAAGCGCAGGGTGGCATTCAT
GCCGATGATCTCAATCCTATTCTATCAAAACTTGCAGCTGCAGTTCAGGC
CAAACTTCCCCAGCAAGATGCATCTCATCTTTATGAGCTAAAAGATCTAC
TCAGTGCCAGCTACAACGCACTGATTAGGATGGTCCAGCGCCAGATTGAT
ACTACAGGGTATCAACCTCATTCGCCCGGTTCGTCTGACTCGCCTGGTAG
CGCGCACAATGGGGACAGATACATCTGCTACCTCTGCCCCAACGAAAATC
ACAACATACTATTCGCGGATCGAGGTACTTTTAGGCGCCACGTATCAGAC
AAACACCACCCAGAATTTCGATACCTGTGCCTAGCCCATCCAATTTGCGA
CTGGGGGACAAACAGGCGGGATAAAATTTACCCTCACATGAGAACCCACC
GTATATATCAAGTGTCTCGAGCGCAAGTAAATCGATTTGCGATTAGGCAG
AGACCGCCGCGAAATTGCGGGCTATGTTGGAAGCCCGTAAGCTGCTGGGC
GGAGTACTTCAAGTGCGTTGCCAACCATTGTCGTATCAAGAATGTCGATT
CGACGAATTCAAACGCAAGCTTGAGCAGACGGGGCAGTGATGATCGCGGA
GGAGGTGGTAACAATGGAACTGGATTCGGTGGAAATTATCCCCCTGGAAA
TGATTTCGGTCCATCGGGTCCGCAGCAGTTCTACCCCGGCAACAATGGGA
GTTTTTCTTCAACTGATGCCGGTCAGAACAATGGTCATTATGGTCATAAT
TTCTCTGGCTACACGGGCGCTACAAACCGAGATGACGAGGACTCTACCTC
AAGCTACTCCTGCGGTGAGGCCGATACCGTCTCAGATGTAGCTCCATCAC
CATCTTGCTGTTCCAGCGACATACCACACGCGATGGATGTTCCTGCCCCA
TCTAGTATCATAAGCCAGCACTTGGCGCTGATGCAGATGACAGAGGAAAC
TGAAAGCTGCGATTCGGTTTCGCGCGAGGAGGATTACCCACCATCCACAT
CTGGCGAATCTGATCTAAGAGACCTCGGTGACGAAACTTATCGCCGTATA
TCACGGCCTCCAAACGATGCTGCTTCAGATCGCAAGCAGACTCCCAGTCC
CAGGACTGAAGATCTCTACAAATGGCGGTGCCAGGGTTGCGGACACGTCC
TAGTCGAGTGCGATAAGTGCTGCCGTCTAGAGGAGACCATCTTCCAGTGC
CACTTGTGCGCAGACAATACCTGCAAGCTCCCCGCTTCCAAGAGAGACTC
CCAAGAAAGCGAGGAATCGGAAAGCTGCAAGCGGACCATTAACGAAGGCG
ACATAGGCGTTCCAGGGCGTCCACTTTGGACTGACCATTGGTCTCTGTCG
CCAACTGAGCACTCTTTGGAGACTCTATCCCTTTTTGATCATGATCACTA
TATGGAACCTGCGAAAGGTGCCAATATGGAAGCTGGAAAATCATCGAATG
ACCACATCCTTGGCTTGAAAGCTGCCAATTATGGGTGTGCACATTTTGGC
AGTCTTTCTCCACTTAGTCTGGATTCTCCTGTTGATTCTGAAGTGACTTG
TTCCTCGATAAACCGAGACACTTCATATTGCCAAGCGCTACCCTCTCTCG
ACGCTAAAGGACCACAGGAAGCATTCGAAGCTGTCCATAAATATGGAAGA
GGTAACTTATTCAAGATAGAAGAGTTCATACACACACTCGATATGTTGTC
TGCCATGGAGTCCACATATCAGTCATACGAAGTCCTTTCTTTCTGTGTCC
TGAATGCAGTGCAAGATCTCTTCGACCAGATGCTTGTTTCTTGGCTCGTC
TGCGAGGCAACCCTTTTACATACAGTGTCATTGTCGTACTGTGGGTGCTT
GCCCCATTCTCCTCCAATGGATGAGTCTGCTAAACATCGGTCTAGGTATC
GGTGAAAGGAGCGTTTCTGAGGAACGATCCGAGTCCGCCATTAGTCGGCG
CTACTTACCCCATCCATGGGAGAAAATGCGTTACCAACCCACAGCTAGAC
AGATTCCGCGGAGGAAGCATTCGCTGCTACGAACGAAGCTCCAAGTGATC
TCCGGGATACTCATCCTCCGTGCCACTGTTCTGAGGAGAAAGCCAATGAT
GATTTCATCCACAGAGACTTCCGCGGAAGTCTCCGAGCCTAGCAAGATAG
GTACTGAGCTCCAGCTAGTCGAGCCAGGTGTCCAGGTTTCCCCAACTCTC
GAGGTGATGTTCAGCCGAGGCACAGAGGTGGTAGCGGACGCTGTTTCCAG
CTTAATTACCGGCGTCATGTCGGCAACGGAAGAAGAGATGGAGTACTTCA
AGCCCATATCGGTGCATGTTTCGAACCTCTTCACGAAGAGATCAACGTGG
CTCGGTGAGGAGAGCCTGATCGAATGAATCTGCTGCCTCCGTAGAGGACA
TTTCGGTTGACTATCTTGTCTTAATTGTACTCTTAATATTGTTTTTGTTC
ACGATATTAACGACCCCATGACTTTATGTTTATATCCCTTGCATTTGTAT
GTTAATATATGTTACTGGCTTCATTACATGCTACTATAATGTATGATAAA
CCACACTGTTCCTTAACTTTTC back to topCoding sequence (CDS) from alignment at ch2:1693245..1696466- >KJC3_002108-T2 ID=KJC3_002108-T2|Name=KJC3_002108-T2|organism=Aspergillus niger KJC3|type=CDS|length=4494bp|location=Sequence derived from alignment at ch2:1693245..1696466- (Aspergillus niger KJC3)
TATGCTCCATCCTCACCGTACTCGCCAGTATCGACCTCGAGAAGTATGAG
TCCAATCGATGGCCTGCACCTAGATACGAGCTTCCTCACAGACAGATCAA
TGAACGACCTGGCAGGTATGCAGATGACAGACAATGGCATACAGGGACTA
CCTGTGGGCGAGGATGACGTATTGTCACTGGTAGTCCCTCCTATGTGTCA
AGCGCAGGGTGGCATTCATGCCGATGATCTCAATCCTATTCTATCAAAAC
TTGCAGCTGCAGTTCAGGCCAAACTTCCCCAGCAAGATGCATCTCATCTT
TATGAGCTAAAAGATCTACTCAGTGCCAGCTACAACGCACTGATTAGGAT
GGTCCAGCGCCAGATTGATACTACAGGGTATCAACCTCATTCGCCCGGTT
CGTCTGACTCGCCTGGTAGCGCGCACAATGGGGACAGATACATCTGCTAC
CTCTGCCCCAACGAAAATCACAACATACTATTCGCGGATCGAGGTACTTT
TAGGCGCCACGTATCAGACAAACACCACCCAGAATTTCGATACCTGTGCC
TAGCCCATCCAATTTGCGACTGGGGGACAAACAGGCGGGATAAAATTTAC
CCTCACATGAGAACCCACCGTATATATCAAGTGTCTCGAGCGCAAGTAAA
TCGATTTGCGATTAGGCAGAGACCGCCGCGAAATTGCGGGCTATGTTGGA
AGCCCGTAAGCTGCTGGGCGGAGTACTTCAAGTGCGTTGCCAACCATTGT
CGTATCAAGAATGTCGATTCGACGAATTCAAACGCAAGCTTGAGCAGACG
GGGCAGTGATGATCGCGGAGGAGGTGGTAACAATGGAACTGGATTCGGTG
GAAATTATCCCCCTGGAAATGATTTCGGTCCATCGGGTCCGCAGCAGTTC
TACCCCGGCAACAATGGGAGTTTTTCTTCAACTGATGCCGGTCAGAACAA
TGGTCATTATGGTCATAATTTCTCTGGCTACACGGGCGCTACAAACCGAG
ATGACGAGGACTCTACCTCAAGCTACTCCTGCGGTGAGGCCGATACCGTC
TCAGATGTAGCTCCATCACCATCTTGCTGTTCCAGCGACATACCACACGC
GATGGATGTTCCTGCCCCATCTAGTATCATAAGCCAGCACTTGGCGCTGA
TGCAGATGACAGAGGAAACTGAAAGCTGCGATTCGGTTTCGCGCGAGGAG
GATTACCCACCATCCACATCTGGCGAATCTGATCTAAGAGACCTCGGTGA
CGAAACTTATCGCCGTATATCACGGCCTCCAAACGATGCTGCTTCAGATC
GCAAGCAGACTCCCAGTCCCAGGACTGAAGATCTCTACAAATGGCGGTGC
CAGGGTTGCGGACACGTCCTAGTCGAGTGCGATAAGTGCTGCCGTCTAGA
GGAGACCATCTTCCAGTGCCACTTGTGCGCAGACAATACCTGCAAGCTCC
CCGCTTCCAAGAGAGACTCCCAAGAAAGCGAGGAATCGGAAAGCTGCAAG
CGGACCATTAACGAAGGCGACATAGGCGTTCCAGGGCGTCCACTTTGGAC
TGACCATTGGTCTCTGTCGCCAACTGAGCACTCTTTGGAGACTCTATCCC
TTTTTGATCATGATCACTATATGGAACCTGCGAAAGGTGCCAATATGGAA
GCTGGAAAATCATCGAATGACCACATCCTTGGCTTGAAAGCTGCCAATTA
TGGGTGTGCACATTTTGGCAGTCTTTCTCCACTTAGTCTGGATTCTCCTG
TTGATTCTGAAGTGACTTGTTCCTCGATAAACCGAGACACTTCATATTGC
CAAGCGCTACCCTCTCTCGACGCTAAAGGACCACAGGAAGCATTCGAAGC
TGTCCATAAATATGGAAGAGGTAACTTATTCAAGATAGAAGAGTTCATAC
ACACACTCGATATGTTGTCTGCCATGGAGTCCACATATCAGTCATACGAA
GTCCTTTCTTTCTGTGTCCTGAATGCAGTGCAAGATCTCTTCGACCAGAT
GCTTGTTTCTTGGCTCGTCTGCGAGGCAACCCTTTTACATACAGTGTCAT
TGTCGTACTGTGGGTGCTTGCCCCATTCTCCTCCAATGGATGAGTCTGCT
AAACATCGGTCTAGGTATCGGTGAATGGGAGATGACACGGGAAACGGCAG
AAATGCTTTCTTCCAAGGCCATTGGCCAGGCTTTCCCACTCAACCACGCC
AAGGGAATTACCTGGTACCCGGTCTTCATCCCTATGCCCCCTCATCATAT
GCTCCATCCTCACCGTACTCGCCAGTATCGACCTCGAGAAGTATGAGTCC
AATCGATGGCCTGCACCTAGATACGAGCTTCCTCACAGACAGATCAATGA
ACGACCTGGCAGGTATGCAGATGACAGACAATGGCATACAGGGACTACCT
GTGGGCGAGGATGACGTATTGTCACTGGTAGTCCCTCCTATGTGTCAAGC
GCAGGGTGGCATTCATGCCGATGATCTCAATCCTATTCTATCAAAACTTG
CAGCTGCAGTTCAGGCCAAACTTCCCCAGCAAGATGCATCTCATCTTTAT
GAGCTAAAAGATCTACTCAGTGCCAGCTACAACGCACTGATTAGGATGGT
CCAGCGCCAGATTGATACTACAGGGTATCAACCTCATTCGCCCGGTTCGT
CTGACTCGCCTGGTAGCGCGCACAATGGGGACAGATACATCTGCTACCTC
TGCCCCAACGAAAATCACAACATACTATTCGCGGATCGAGGTACTTTTAG
GCGCCACGTATCAGACAAACACCACCCAGAATTTCGATACCTGTGCCTAG
CCCATCCAATTTGCGACTGGGGGACAAACAGGCGGGATAAAATTTACCCT
CACATGAGAACCCACCGTATATATCAAGTGTCTCGAGCGCAAGTAAATCG
ATTTGCGATTAGGCAGAGACCGCCGCGAAATTGCGGGCTATGTTGGAAGC
CCGTAAGCTGCTGGGCGGAGTACTTCAAGTGCGTTGCCAACCATTGTCGT
ATCAAGAATGTCGATTCGACGAATTCAAACGCAAGCTTGAGCAGACGGGG
CAGTGATGATCGCGGAGGAGGTGGTAACAATGGAACTGGATTCGGTGGAA
ATTATCCCCCTGGAAATGATTTCGGTCCATCGGGTCCGCAGCAGTTCTAC
CCCGGCAACAATGGGAGTTTTTCTTCAACTGATGCCGGTCAGAACAATGG
TCATTATGGTCATAATTTCTCTGGCTACACGGGCGCTACAAACCGAGATG
ACGAGGACTCTACCTCAAGCTACTCCTGCGGTGAGGCCGATACCGTCTCA
GATGTAGCTCCATCACCATCTTGCTGTTCCAGCGACATACCACACGCGAT
GGATGTTCCTGCCCCATCTAGTATCATAAGCCAGCACTTGGCGCTGATGC
AGATGACAGAGGAAACTGAAAGCTGCGATTCGGTTTCGCGCGAGGAGGAT
TACCCACCATCCACATCTGGCGAATCTGATCTAAGAGACCTCGGTGACGA
AACTTATCGCCGTATATCACGGCCTCCAAACGATGCTGCTTCAGATCGCA
AGCAGACTCCCAGTCCCAGGACTGAAGATCTCTACAAATGGCGGTGCCAG
GGTTGCGGACACGTCCTAGTCGAGTGCGATAAGTGCTGCCGTCTAGAGGA
GACCATCTTCCAGTGCCACTTGTGCGCAGACAATACCTGCAAGCTCCCCG
CTTCCAAGAGAGACTCCCAAGAAAGCGAGGAATCGGAAAGCTGCAAGCGG
ACCATTAACGAAGGCGACATAGGCGTTCCAGGGCGTCCACTTTGGACTGA
CCATTGGTCTCTGTCGCCAACTGAGCACTCTTTGGAGACTCTATCCCTTT
TTGATCATGATCACTATATGGAACCTGCGAAAGGTGCCAATATGGAAGCT
GGAAAATCATCGAATGACCACATCCTTGGCTTGAAAGCTGCCAATTATGG
GTGTGCACATTTTGGCAGTCTTTCTCCACTTAGTCTGGATTCTCCTGTTG
ATTCTGAAGTGACTTGTTCCTCGATAAACCGAGACACTTCATATTGCCAA
GCGCTACCCTCTCTCGACGCTAAAGGACCACAGGAAGCATTCGAAGCTGT
CCATAAATATGGAAGAGGTAACTTATTCAAGATAGAAGAGTTCATACACA
CACTCGATATGTTGTCTGCCATGGAGTCCACATATCAGTCATACGAAGTC
CTTTCTTTCTGTGTCCTGAATGCAGTGCAAGATCTCTTCGACCAGATGCT
TGTTTCTTGGCTCGTCTGCGAGGCAACCCTTTTACATACAGTGTCATTGT
CGTACTGTGGGTGCTTGCCCCATTCTCCTCCAATGGATGAGTCTGCTAAA
CATCGGTCTAGGTATCGGTGAATGGGAGATGACACGGGAAACGGCAGAAA
TGCTTTCTTCCAAGGCCATTGGCCAGGCTTTCCCACTCAACCACGCCAAG
GGAATTACCTGGTACCCGGTCTTCATCCCTATGCCCCCTCATCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002108-T2.utr3p1 | KJC3_002108-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002108-T2.utr5p1 | KJC3_002108-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1693245..1696466 - |
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