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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1699190..1700749- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002110-T1 ID=KJC3_002110-T1|Name=KJC3_002110-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1560bp|location=Sequence derived from alignment at ch2:1699190..1700749- (Aspergillus niger KJC3)
AGACAAAGGAACATCATAAGAGAGCACAAAATCCTCCTTTTCATGTCTCA
TAAACCAACCCATTTATGTGTTAATCCAAGTTCTCGGTTGTACTCAACTT
ATAAAGCCCAGCTATCCATCGCCATGTCACCCATGCTGGAAGCTCCAGCC
CGCCGCCAAATGAGGGCCGCACTGAGGGACTTGGCGCTGAAGATCAAGAG
CCTTCGAGTTGATGAACTAGACCTACAGCTATTGGAAAAACTCAATATTC
GAGTCAATCTTATGTCGCTAGATGAGGCGTCACCACACAAACCATCTTAT
TTCGCCCCTTTGAAAGACCACGCAATTCCAGATCCCAAGGATGATGACCT
TGATGGACCATATAATGGTCTAAATGAAGAAACGGAGCCAGCTTTCACCA
GTCCTATCGATCGTGCATATGCGGTAGATATTCACTTCTCTTGGTACATT
ACCTATTACTCTATGAAGGCCGACCGTGAAGGATATAGGACTACCTGGTT
TTCGAAATGGTAAATAAGGCACCCCCCTGTGATCTAGCAATATGTACTAA
CGGGTGCTATGTAGTGTTGGCGATTCACCATTTGAAAAATCTAGTCTGTA
CAAGTATGAACAGCCTGAGTTCGGGTGCTATCGTATCGCCGAGTTGAACG
GCCCTACACGTCCACATGTCAAGGCAGTCATGTACAATAATCTAGTCGCC
ACAGATTCCACAATCCTCTTCGGCGAGTTGATGCCAATCCTTCGAATTAT
GCTGACACAGCTTCGGAGGCAGAAGTTCATTCATGAAATGGTTTCGCCGG
TAACGACTGCACCAATCAATCTTGTCGCTTGTCAGAGCTGATGTGTGCTC
CAGGTCTTGATATTCTCGCTCATGGGGCTACAAGCCCGAGTGATTGAAGC
ATTTTTCCACGGTGAGAATCTGGTGCTGCGCCCGACTAAGATGTATGACT
TCAGCCACGGAAACTCCGATGCCTTTAAATCACTGGCCCAGTGGTATATT
TTGGGAGAACCTATTGGGGATACTACCCAGGCTTCCTGATACATTGCGGG
TTTCGCATCTGTTTGACATCACGTGTTTGTCAGATGCATGCTTATGGTTG
TCAATCATGTTGTTCTCTAGTTCTCCTTCATCGTTCAAGCAGGGAGTCAT
GGTCTGTGGGATGTGTCACGTGGGGGAGTTGCAAGGCGTATGTTTGCTTA
CGAATTATATGACTAATTTGGGATGGGTCTGTTTCTTTCTTGTGATGTTT
CTCAGCAGCCCGTCTTGCATTAATATTTTGGAGTGTACTACGACCCTATC
TACGATTAGAGAAGCTTATGGACCGAACTTCTTTTCATAGGGGGACTGGT
GTCCGGCTCTGACTTCGCGTATAACCGGATACTGGCATAGTGCACAAAAT
ATACACCACGAGTATGATAGAGCTAGGTCACCACCCAGACAGGAAAATAG
TGGGGGAACAGGCCTTGATGTTACAGATCCTTTGATTATTAGAGCTGACA
TTGCTGCAATTTCCTACACCCTTCGATGCCCGAGACCTCAGGTTTTGCGG
CTGTGCAAAG back to topCoding sequence (CDS) from alignment at ch2:1699190..1700749- >KJC3_002110-T1 ID=KJC3_002110-T1|Name=KJC3_002110-T1|organism=Aspergillus niger KJC3|type=CDS|length=2664bp|location=Sequence derived from alignment at ch2:1699190..1700749- (Aspergillus niger KJC3)
GTCTTGATATTCTCGCTCATGGGGCTACAAGCCCGAGTGATTGAAGCATT
TTTCCACGGTGAGAATCTGGTGCTGCGCCCGACTAAGATGTATGACTTCA
GCCACGGAAACTCCGATGCCTTTAAATCACTGGCCCAGTGGTATATTTTG
GGAGAACCTATTGGGGATACTACCCAGGCTTCCTGATGTTGGCGATTCAC
CATTTGAAAAATCTAGTCTGTACAAGTATGAACAGCCTGAGTTCGGGTGC
TATCGTATCGCCGAGTTGAACGGCCCTACACGTCCACATGTCAAGGCAGT
CATGTACAATAATCTAGTCGCCACAGATTCCACAATCCTCTTCGGCGAGT
TGATGCCAATCCTTCGAATTATGCTGACACAGCTTCGGAGGCAGAAGTTC
ATTCATGAAATGGTTTCGCCGATGTCTCATAAACCAACCCATTTATGTGT
TAATCCAAGTTCTCGGTTGTACTCAACTTATAAAGCCCAGCTATCCATCG
CCATGTCACCCATGCTGGAAGCTCCAGCCCGCCGCCAAATGAGGGCCGCA
CTGAGGGACTTGGCGCTGAAGATCAAGAGCCTTCGAGTTGATGAACTAGA
CCTACAGCTATTGGAAAAACTCAATATTCGAGTCAATCTTATGTCGCTAG
ATGAGGCGTCACCACACAAACCATCTTATTTCGCCCCTTTGAAAGACCAC
GCAATTCCAGATCCCAAGGATGATGACCTTGATGGACCATATAATGGTCT
AAATGAAGAAACGGAGCCAGCTTTCACCAGTCCTATCGATCGTGCATATG
CGGTAGATATTCACTTCTCTTGGTACATTACCTATTACTCTATGAAGGCC
GACCGTGAAGGATATAGGACTACCTGGTTTTCGAAATGGTCTTGATATTC
TCGCTCATGGGGCTACAAGCCCGAGTGATTGAAGCATTTTTCCACGGTGA
GAATCTGGTGCTGCGCCCGACTAAGATGTATGACTTCAGCCACGGAAACT
CCGATGCCTTTAAATCACTGGCCCAGTGGTATATTTTGGGAGAACCTATT
GGGGATACTACCCAGGCTTCCTGATGTTGGCGATTCACCATTTGAAAAAT
CTAGTCTGTACAAGTATGAACAGCCTGAGTTCGGGTGCTATCGTATCGCC
GAGTTGAACGGCCCTACACGTCCACATGTCAAGGCAGTCATGTACAATAA
TCTAGTCGCCACAGATTCCACAATCCTCTTCGGCGAGTTGATGCCAATCC
TTCGAATTATGCTGACACAGCTTCGGAGGCAGAAGTTCATTCATGAAATG
GTTTCGCCGATGTCTCATAAACCAACCCATTTATGTGTTAATCCAAGTTC
TCGGTTGTACTCAACTTATAAAGCCCAGCTATCCATCGCCATGTCACCCA
TGCTGGAAGCTCCAGCCCGCCGCCAAATGAGGGCCGCACTGAGGGACTTG
GCGCTGAAGATCAAGAGCCTTCGAGTTGATGAACTAGACCTACAGCTATT
GGAAAAACTCAATATTCGAGTCAATCTTATGTCGCTAGATGAGGCGTCAC
CACACAAACCATCTTATTTCGCCCCTTTGAAAGACCACGCAATTCCAGAT
CCCAAGGATGATGACCTTGATGGACCATATAATGGTCTAAATGAAGAAAC
GGAGCCAGCTTTCACCAGTCCTATCGATCGTGCATATGCGGTAGATATTC
ACTTCTCTTGGTACATTACCTATTACTCTATGAAGGCCGACCGTGAAGGA
TATAGGACTACCTGGTTTTCGAAATGGTCTTGATATTCTCGCTCATGGGG
CTACAAGCCCGAGTGATTGAAGCATTTTTCCACGGTGAGAATCTGGTGCT
GCGCCCGACTAAGATGTATGACTTCAGCCACGGAAACTCCGATGCCTTTA
AATCACTGGCCCAGTGGTATATTTTGGGAGAACCTATTGGGGATACTACC
CAGGCTTCCTGATGTTGGCGATTCACCATTTGAAAAATCTAGTCTGTACA
AGTATGAACAGCCTGAGTTCGGGTGCTATCGTATCGCCGAGTTGAACGGC
CCTACACGTCCACATGTCAAGGCAGTCATGTACAATAATCTAGTCGCCAC
AGATTCCACAATCCTCTTCGGCGAGTTGATGCCAATCCTTCGAATTATGC
TGACACAGCTTCGGAGGCAGAAGTTCATTCATGAAATGGTTTCGCCGATG
TCTCATAAACCAACCCATTTATGTGTTAATCCAAGTTCTCGGTTGTACTC
AACTTATAAAGCCCAGCTATCCATCGCCATGTCACCCATGCTGGAAGCTC
CAGCCCGCCGCCAAATGAGGGCCGCACTGAGGGACTTGGCGCTGAAGATC
AAGAGCCTTCGAGTTGATGAACTAGACCTACAGCTATTGGAAAAACTCAA
TATTCGAGTCAATCTTATGTCGCTAGATGAGGCGTCACCACACAAACCAT
CTTATTTCGCCCCTTTGAAAGACCACGCAATTCCAGATCCCAAGGATGAT
GACCTTGATGGACCATATAATGGTCTAAATGAAGAAACGGAGCCAGCTTT
CACCAGTCCTATCGATCGTGCATATGCGGTAGATATTCACTTCTCTTGGT
ACATTACCTATTACTCTATGAAGGCCGACCGTGAAGGATATAGGACTACC
TGGTTTTCGAAATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002110-T1.utr3p1 | KJC3_002110-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002110-T1.utr5p1 | KJC3_002110-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1699190..1700749 - |
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