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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1704478..1705879+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002113-T1 ID=KJC3_002113-T1|Name=KJC3_002113-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1402bp|location=Sequence derived from alignment at ch2:1704478..1705879+ (Aspergillus niger KJC3)
CTCGACTCATCCAAGCACAACCTCGCCATCATGTCGCTTGCTAGAGCAGG
AAGATTCGCCTGCCTCCGCGCCGGCAGGCTCGCCACCCCTGTCAATGCGC
GTTTTGTGTCTACAGGCACCGGTCGAGGCGACCCTTCCCGCACATCCAGC
ACTTCTGATGCCCCGACTGTTCCTCACACGGAGAGCACCTTGATCCGCAA
GGAGAGCCCTTCTGAGGCTATGACCCGTCATCAGCCCGATTACGATGCTA
CCATTGATCACGGCACCTCGTACGAATTTCTCCCACCTGGCAATGCAATT
GGAGTGGTCAAACTGACAAAACGAAACCAGCCAATTCTCCCCTGTGCCCA
AGCGCGTCATGGATGGCAGTGAGCCTGGTGCCACTGTTGCTGCCGCTGTT
CTGTCCGGCGCTCCAACCGACCTGCAGGCCCGTACTGTCCGGTATGAAGC
CCCATAAACGATATCAATCGCCCGCCCGTATCAGTCGCGCTGATCAGTCA
TTTACAGGATCTACCGTCAAGCGAAGCCCGCAACGCAGTCCGGAACCTGG
CACGGTCACCACTGGAGAATGGATTGGGATATCCTGCAGAGGGGTCATCG
CTGGGAGAACCCCCTGATGGGCTGGCAATCCTCTGCTGATTGCATGCAGG
GTACCCACCTGAACTTCAAGAGCAAGGAGGATGCCATTCTGTTCGCCCAG
AAGCAGGGATACGAGTACTTCGTTCAGGAGCCAAATGAGCGTCGCTTCGT
TCCCAAGGCCTACGCTAACAACTTCGTCCACGAACCGAAGAAGCTCAAGT
ACATCAAGACTAAATGATTTGGGTTTCTGGTGTGTCATGTACATAAGTGC
AGGTCTTTGTTTAAGTTCTGGGTTGTGCTAGGTGATAAATTCAACTTTCC
TAAATGTTACACTTTTTCGCTATTGCAGAGTTTCATTGACATAATCCGGT
AAATTCCCGTCTGTCTGCTGGTATGCACTATTGAGTTCATAAATCGATTT
AGCGCCAAGCGAGTCTGGAGAAGCTCGACAAGCATTTGGAAGACGCTTGC
GCTAGTTCCCAGTATTTTCTGAAGAATAGGCCGCTTTGTGCCTGGTATGA
CAAGAGTCATTGGTAGCAAATGTCAATATTCATACTCAGTCTTCGTCGGA
CCGAATATCGAGGCAATAGCGTTACAGTACGGAAAGTTGAGGCTCCATGC
ACTTTCACATGCTGTGCCTCTCTTCCATGGCAATTCATTCTCAAATCCAT
TACACTAGCACAGCTGGTAGTGGTCAAGGAACTATTAAGAATGATGTTGC
TTTGGCATGCAATCCTTACTAAGGGTGGTGTTAGCCCACTGCGGAGTGAC
CCTCTGTATATACAGGCGTGCTACAAGTAGTACTTATGAGTGAATAACAG
AG back to topCoding sequence (CDS) from alignment at ch2:1704478..1705879+ >KJC3_002113-T1 ID=KJC3_002113-T1|Name=KJC3_002113-T1|organism=Aspergillus niger KJC3|type=CDS|length=1980bp|location=Sequence derived from alignment at ch2:1704478..1705879+ (Aspergillus niger KJC3)
ATGTCGCTTGCTAGAGCAGGAAGATTCGCCTGCCTCCGCGCCGGCAGGCT
CGCCACCCCTGTCAATGCGCGTTTTGTGTCTACAGGCACCGGTCGAGGCG
ACCCTTCCCGCACATCCAGCACTTCTGATGCCCCGACTGTTCCTCACACG
GAGAGCACCTTGATCCGCAAGGAGAGCCCTTCTGAGGCTATGACCCGTCA
TCAGCCCGATTACGATGCTACCATTGATCACGGCACCTCCCAATTCTCCC
CTGTGCCCAAGCGCGTCATGGATGGCAGTGAGCCTGGTGCCACTGTTGCT
GCCGCTGTTCTGTCCGGCGCTCCAACCGACCTGCAGGCCCGTACTGTCCG
GATCTACCGTCAAGCGAAGCCCGCAACGCAGTCCGGAACCTGGCACGGTC
ACCACTGGAGAATGGATTGGGATATCCTGCAGAGGGGTCATCGCTGGGAG
AACCCCCTGATGGGCTGGCAATCCTCTGCTGATTGCATGCAGGGTACCCA
CCTGAACTTCAAGAGCAAGGAGGATGCCATTCTGTTCGCCCAGAAGCAGG
GATACGAGTACTTCGTTCAGGAGCCAAATGAGCGTCGCTTCGTTCCCAAG
GCCTACGCTAACAACTTCGTCCACGAACCGAAGAAGCTCAAGTACATCAA
GACTAAATGAATGTCGCTTGCTAGAGCAGGAAGATTCGCCTGCCTCCGCG
CCGGCAGGCTCGCCACCCCTGTCAATGCGCGTTTTGTGTCTACAGGCACC
GGTCGAGGCGACCCTTCCCGCACATCCAGCACTTCTGATGCCCCGACTGT
TCCTCACACGGAGAGCACCTTGATCCGCAAGGAGAGCCCTTCTGAGGCTA
TGACCCGTCATCAGCCCGATTACGATGCTACCATTGATCACGGCACCTCC
CAATTCTCCCCTGTGCCCAAGCGCGTCATGGATGGCAGTGAGCCTGGTGC
CACTGTTGCTGCCGCTGTTCTGTCCGGCGCTCCAACCGACCTGCAGGCCC
GTACTGTCCGGATCTACCGTCAAGCGAAGCCCGCAACGCAGTCCGGAACC
TGGCACGGTCACCACTGGAGAATGGATTGGGATATCCTGCAGAGGGGTCA
TCGCTGGGAGAACCCCCTGATGGGCTGGCAATCCTCTGCTGATTGCATGC
AGGGTACCCACCTGAACTTCAAGAGCAAGGAGGATGCCATTCTGTTCGCC
CAGAAGCAGGGATACGAGTACTTCGTTCAGGAGCCAAATGAGCGTCGCTT
CGTTCCCAAGGCCTACGCTAACAACTTCGTCCACGAACCGAAGAAGCTCA
AGTACATCAAGACTAAATGAATGTCGCTTGCTAGAGCAGGAAGATTCGCC
TGCCTCCGCGCCGGCAGGCTCGCCACCCCTGTCAATGCGCGTTTTGTGTC
TACAGGCACCGGTCGAGGCGACCCTTCCCGCACATCCAGCACTTCTGATG
CCCCGACTGTTCCTCACACGGAGAGCACCTTGATCCGCAAGGAGAGCCCT
TCTGAGGCTATGACCCGTCATCAGCCCGATTACGATGCTACCATTGATCA
CGGCACCTCCCAATTCTCCCCTGTGCCCAAGCGCGTCATGGATGGCAGTG
AGCCTGGTGCCACTGTTGCTGCCGCTGTTCTGTCCGGCGCTCCAACCGAC
CTGCAGGCCCGTACTGTCCGGATCTACCGTCAAGCGAAGCCCGCAACGCA
GTCCGGAACCTGGCACGGTCACCACTGGAGAATGGATTGGGATATCCTGC
AGAGGGGTCATCGCTGGGAGAACCCCCTGATGGGCTGGCAATCCTCTGCT
GATTGCATGCAGGGTACCCACCTGAACTTCAAGAGCAAGGAGGATGCCAT
TCTGTTCGCCCAGAAGCAGGGATACGAGTACTTCGTTCAGGAGCCAAATG
AGCGTCGCTTCGTTCCCAAGGCCTACGCTAACAACTTCGTCCACGAACCG
AAGAAGCTCAAGTACATCAAGACTAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0022900 | electron transport chain |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002113-T1.utr5p1 | KJC3_002113-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002113-T1.utr3p1 | KJC3_002113-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006885 |
| DBxref | InterPro:IPR038532 |
| DBxref | PFAM:PF04800 |
| Product | NADH:ubiquinone oxidoreductase 21kD subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1704478..1705879 + |
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