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KJC3_002118-T2, KJC3_002118-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002118-T2
Unique NameKJC3_002118-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1722310..1724083-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002118-T2 ID=KJC3_002118-T2|Name=KJC3_002118-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1774bp|location=Sequence derived from alignment at ch2:1722310..1724083- (Aspergillus niger KJC3)
CTCACTCCCTTCTGCCCCGAGCATCCTAATGGCTCCCGTCTGCGAAGCTT
TCCATCTTCACAGACGGCCTGTTGCTCGCTACCAGGTCACTTGACATCCC
ACTGCGAAATTCCGCATCCACTAAGCTCTTCACCATGTCCTCTGCCAATT
ACGTATGCGCCCTGACATGCCGTGTGTGCCGCGTGGTTGCCTGGTTTTAA
CGGGAAGCAGATGTCTCCCTCTTCCTCGACGACGCCAACATGGCATCAGT
TCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAAACGTGAGTGATTTAC
CCCGCCTTTCCGTTGCGCGCCACGATTGCATGATGTACCTTGAAATCAAG
TTGGGAATCTCTCTGAAAAAACAACTGAGGAGAATATATTAACTTGTGTT
TCTGAACCCTTCGTTTGATTTTGCCTTATCATCATCAAGTTTACCGGTTG
GTCTGCAGCTGCTAACTGTTCTCTTGAAGTGATATCAATTATCTAGTCAT
GGATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTCTCAG
TAGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGAAAGA
GTTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCATTGA
GAAGATCAATGAGCTCAACCCACAGGTAAGACACCTCTTCTATCTCATCC
CCTACCCACCACCCTCGTTGCAAGGATTATACGACGTTTCATGCACCACT
CAGAACATCCCTTTTGGGGTTTGTTGATAAACAAACATCTTCAGTCCTCA
GTATGAGCAGCAAGAATAAAACATGCCGTTACTTGTCATCACGCCTATTT
CATAGCCTTTTGCTGACTTGACCGGCTTAGATCCTAGATGAAAATGCTCC
TTTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTTGATTCGCTCGT
GCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTGAGTTTGCGAGC
TCGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTCCTTGAGGACCT
TGAGAGGACTCTTGCTCTCTTAATGTTCCCGGCGGATAGCCTGTCCCCGC
CACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATATTGCCAACCGC
GTCAACGAAGCCATTCTGTTGAATCAAGGCGCTCGTAAAGAGGCCCGGCT
ACGCAACTTGGTTAAACTGCGCGCGTGGGCTGAACAGAAAGCCCGGGAGG
CTAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGGGCGATAATCCC
AACACCCACAACAGTAATCCCCTGGCCAGTTCGACCAGTGCCAGTCACAA
TGGCTCTAACGACACCGTAATGACCAATAATGGGGATATCGACCCCATGA
TCTCATAAATCCAGCATTCGATCTGCGATCACCTGGCACTTAATCCTCAA
TTTTCACGTATCACCTCGCCCGAAGTTGTTTTTTCGCCATTGAGCACGGA
GTTTGGGAGCTGGATAAGGGCAGAGATGAATTTTCGTCGCCCTCTTGTAA
CATCTAAGGCCCAATACGGGGATACATTATGCATACCTTTTTGCGACACT
TGACACTTGTGGTCTTATCCTACAGTTGTGTGCGAAGCAAGGATTGAGCC
TGCCCAATTGAAATGGACCTCTAGCAGGTTTTTGAATTATTTATATGCAG
CCAACTCTGTACACCGTAGTCACTGAACCTATCATGACTATTCAGAAGCC
ACCACTGAACAATAGCGTAGGGAC
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Coding sequence (CDS) from alignment at ch2:1722310..1724083-

>KJC3_002118-T2 ID=KJC3_002118-T2|Name=KJC3_002118-T2|organism=Aspergillus niger KJC3|type=CDS|length=2403bp|location=Sequence derived from alignment at ch2:1722310..1724083- (Aspergillus niger KJC3)
ATCCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCT
GGTGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCC
CTGCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAAC
CCCCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATGTTCCC
GGCGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTC
GTAAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGC
GCTCGTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGGC
TGAACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACC
TTGGACTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGT
TCGACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAA
TGGGGATATCGACCCCATGATCTCATAATGATATCAATTATCTAGTCATG
GATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTCTCAGT
AGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGAAAGAG
TTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCATTGAG
AAGATCAATGAGCTCAACCCACAGATGTCTCCCTCTTCCTCGACGACGCC
AACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAAA
CATCCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGC
TGGTGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGC
CCTGCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAA
CCCCCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATGTTCC
CGGCGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTT
CGTAAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGG
CGCTCGTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGG
CTGAACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGAC
CTTGGACTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAG
TTCGACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATA
ATGGGGATATCGACCCCATGATCTCATAATGATATCAATTATCTAGTCAT
GGATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTCTCAG
TAGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGAAAGA
GTTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCATTGA
GAAGATCAATGAGCTCAACCCACAGATGTCTCCCTCTTCCTCGACGACGC
CAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAA
ACATCCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAG
CTGGTGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAG
CCCTGCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCA
ACCCCCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATGTTC
CCGGCGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCT
TCGTAAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAG
GCGCTCGTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGG
GCTGAACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGA
CCTTGGACTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCA
GTTCGACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAAT
AATGGGGATATCGACCCCATGATCTCATAATGATATCAATTATCTAGTCA
TGGATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTCTCA
GTAGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGAAAG
AGTTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCATTG
AGAAGATCAATGAGCTCAACCCACAGATGTCTCCCTCTTCCTCGACGACG
CCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAA
AAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002118KJC3_002118Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002118-T2KJC3_002118-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002118-T2.cdsKJC3_002118-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002118-T2.utr3p1KJC3_002118-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002118-T2.exon3KJC3_002118-T2.exon3Aspergillus niger KJC3exon
KJC3_002118-T2.exon2KJC3_002118-T2.exon2Aspergillus niger KJC3exon
KJC3_002118-T2.exon1KJC3_002118-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002118-T2.utr5p1KJC3_002118-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264JK1
DBxrefInterPro:IPR024964
DBxrefInterPro:IPR013144
DBxrefInterPro:IPR006595
DBxrefInterPro:IPR006594
DBxrefPFAM:PF08513
DBxrefPFAM:PF10607
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1722310..1724083 -
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