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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1729506..1733944+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002121-T1 ID=KJC3_002121-T1|Name=KJC3_002121-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4439bp|location=Sequence derived from alignment at ch2:1729506..1733944+ (Aspergillus niger KJC3)
CTCCCTCTCCTCCCTCCCTCTTCCTTTCCCCTTCCCCTCCGGCCAATTCA
TTGAACCCCCCCGGGCCCTGCCAATTCATTCCCACTTGTTTGCGTCTCCC
TCCGCAGTGGGAAACTCGATTTAATTGCATCTGGATCGATTGGCTTCGAT
CCCATCCCCAGTCACTTGATTCTTTCCGGCCCAATTGCGGCTGACTAACC
CCCTTCTGGACACGGGCAGTCACTATTACCACTAGTTCACTTCTACTACT
TCCTTTTACAACTACTTACTTTACTTCACTTACTACTCCTATTGCTGTCT
ATCCCTCTGCAAGTGGGCGTGTCTGGCCTCCACCGTGAAAGAAGGCGCCC
TCCCCCGATCATCACTTCTGGATGGCTTGATCATGGTTAACATTCGGCGG
GATTGAACGATGGGTGCTGCAGCTCAGTCTAGTATATCTGTCTGAGTGTT
GTTTTCTTGCCTTGATTTCCTAGCTTAATCATTTACTGTTTGCTTTTTTG
TCTCGAGTGCTCAGGCTTACCTTGTTCCGAATTGCCAACATGCTGGGTCG
ACTGTTGAGCACTGCCGCGGCTACTCTCAATCCGGCGACCTACAACGCCA
AAAACGCTCATCAACTAGAGTCCGTCACGGAGGAGGAACATACATCCGGC
TTACTATTCCCCGATGCTAGTCTTCTCCGACATTCCCATACGCACGCATA
TCCGCTGCATACTGCCTACAATTCACCGAACGCTTCTACGGCTGGTGCCT
ATGATGATCGCGGCGGTGTCGAGTTGGACCCGTTGAAGGATTTCCGGGTG
ATAATAGCACAAAATGCGCTGGGAGATCGGGACGCTTGTGTCCTGTTGGA
CACACGCGCCAGTTCGCAGGATCAGACTTCCATGGGACTTGGGTTGGAAC
CTCAGGTGTTTGACAATACCACCGGTGCGAGACATGCCCGTACGGTTTCA
AATCTTACCCGTGGAACACGGCGGGGCTATTTGTCTCAGTCGTCGGCTGC
AGAGCCAAGCCCACTCTCTGTCGCTGCGGAGGCACGGAGGTCACCTCCCA
TGTCGTCTGGCGCTTTCATGAGGGCTCGTGGTCGTAGTTCCACCTTATCG
CCGGCGGGAAGCTATAATGAACCTGGCCACCCTCGCTATGCTGCGGACTC
GAATGACACGGGTCTGTTGAATTGCATTTTCGGCAGCAGTGCGTTTAGCT
ATAGGGGATCGTCGACGAAGATGCATATCATCTCTGCCGATGATGAACCG
GGCAAAACTGCACCTACATCTCCTGCAACCCGCAACTCGCTGTCACGGGC
GTACACAACTGGAAGTCAATCGGCCTTTACAAGCACCAATCGCGGGAATG
AGTCCAGACCTCCAGCAAAGGTCACGATACTTCTGACTAGAATGTTCAGC
GTGCATCTGCCCGAAGGTGGCGAGACGTCTCCGGATGGCATGAACCCGGC
TGGTTCTGTAAACCAGGAGTCTCTTCCGAACAGCGGTTTCCCTTTTCCAG
ACGTCACGAAGCGTCGGAAGATCAAGGAGAAAAAGACACCGATGTATGCT
GTGGCGATTACTATTCAAATTCCGCTCCTCTCTCGAAACGCAGGGCGGCC
AGTTTCTCGGTTTAATGCCCAGGGTCCGGACTCTCCCAAACCGGGAATGT
CGTGCTCCCTGGATTCCGACTATCGTTTCCGTGGAGGATTCCTCGATGAC
AGTTTGTCACTTGCAAGCCCGCCTGCGAGCCTGGATGAGCGCATTGACCT
TCTGGTTGATCATTGGGATGTCATCAACCGCGCCCTCTCACACTTAGAGA
GACTGTCACGAAGAGAAATTCTCTTTCTGCTTAAGAAGGTAGATTCTTCT
TCGGCCATGCATCCAAAGCCAGCTAAGCCTCCAAATATGCAACGAACAAA
TCAAACATTTGTCCACCTGCCTGCGAATATCTTGGCCGTAAATTCCAGGC
TACGAGACGAAGCAATCCGCAGCAGCCGTCGCATTAGCACGGCGCTGCAG
ATGCCATTCGTCGTAACCGGCCAGAATCGATGGGGCGTGTGGCGTGAGGA
GGGCCGCTCCATCATTCGCAGCATTGGGGATAAGGATCACAGCTTTTTCT
TCCTTGTTCTCATTACAGCATTCCTGGGTAACCATACTGAGTGGCTCAAT
TCTCTCGGCCCCGAATGGTACCGACGGAGGCATTATTTACAACAGAAGGC
GCAGCAGGATTCTGACCCGCTTCTTGCTCACCGCACTGTCATTATATCGT
CTGACAAGATGACGGCGCGGAGACTTATTTTCTTGCTGGCTGTATTCCTT
CCACCGAAACAGCGTTTCGAGCCTCTGCCTTCCCCTATCAGGCCGGGTAC
CGCAGCGTCGACGAGAGCCATTTCTCAGAGCCCGCCAAATGTCCCGGTTC
TGCGGCAGGAGTCCCTGCGGAGAGTGATGGAACGTCGATCCCGCGCACAG
CGCCTCACTCTCAGTGATAGAGAACAGCACCAGCGGTCCGTGAGCGTTTC
GTCGTGCGAGACGGCGCATCGCTCCACGGACGATGCCGAGCCGTCGGTGA
CACCAGAGTTCAGTACCATGCGCCGGGGGTCCGACGCTCGCTCCATTCGA
GCATTAGGCGTGCCCGTCCACGCCAAGGATATGCGTGCGAGGAATACAAG
TGCGGCGACAACATCGACCACCACCCCTGGTAGTACTGTCCCGGTCCCCC
ACTTTGCTTCTCAAGGCCGCTCCGAGCGTGCAGGGTCGGACCAGGCAGTG
GCCGATGGGCCTGACAGCCTCGCGTCGGAAACGTTGCTCAGGAGCCTCCA
GCGAAGCGAAAGCACAAACACTAGTGCGAATGGCAGTGTGCCATCTGCTA
ATGGTCGATGGGGCAACATATTCTCCGGTCTGTGGAGCGCCCGTCAGGAA
TCGTCTACTGGTGACAGCGAATCTGTGGCACCAACCGACACCCGCAAACG
GTCCGTGTCAGCGTACACAAACCCTCCGAGGCGCCCTCCTCCCACCTTGA
GTCAGATGGTCAAAGAGGCCTCGCTCGGACCTACCGAACTCTCTCCGAAA
AGCGCGACGAGCAATCATATCTCCATCCCGCAGCCTTCAAATGCTCACAA
GGGATATGAGGACGACGATGCTCCAGATGAGGCTGCGGCTACGGACCAAG
CGAGAGAGTCGTCGCTGAAGTTGTCGGTCCGAGGCGATGATGGGATTGTT
GATGTTGATCTTCCTCTGCCCGGGTTCGTTTCGCTTTCTTCATCAGGTGA
TTCCACGATGGCATCCCCGAAGAAGACGCGAACGTCAGTCACTAGTGTTG
ATGCCGTGGCGTCTACGCACAGCAGCACATCTGGCTTCCCTTCTACCTTG
AAAGACAGTGATGGACCTAACATCAACGTTGCTGGCTGGTTGAAGAGCTT
CCATGATGACTTCTTGCTTCAAGCGGTTCGACCCTACAATGGGCTCGAGG
CAGACATCAAGCGCGCCATGCAAGCAGAACCGATGTCAAGCCAAGCCGCG
TGCCTTGATGCGGACGGATCCGGACGATGGGTTGATGTTGCGACCACTCT
CATTGCTGATGTGCGAACCTTCACGGTGAAGCGGCTGCGGCTACGTCGTA
AAGTCGGTAGTGCGTCTTGGCGCAACACATCGCCTTCATTCTCTCCCCAA
CCGGGCACACCTCGTCATGTCTCTGGCGGCTCGGCGTCTGCGTCTCAGCT
GACCAGCTTCTTCTCCCAAGCTACCGCTTCTAGCAAATCGTCTGCCAGTT
CTACATCTGATGGGTTCGGCTCAAGTGATGTGGAAGAACGCTTCGTGGAG
GAGCACGTGATGGATTTAGATGGCACGCTCGTTGACGCTCTTGAGCGAGT
CCTCGCTCAGAGCGGACCTTCCTCAATGGTACACTCCCGGGCTCCGTCGC
CCACACGCACTCGGCGTGCTGAGGACAAGCATATGTCAGATGTTCTGAGC
CGGGATGAAATGCGTCCGGCGGAGGTTCCTCGGACCGAGTGTCGCAAACT
TGTCCTAAGCGCGCTCGATGAGGTCGTTCGCAGTGTAACGGCGGAACACT
GCCGTGAAGATGATAGCGAGCTGGGGCCCACAGACCGGGACCGCCGGCGA
GTCCAGACCGGAGGTGATAATACCTTACGGGAGGGCATTCGTAAATGGCT
CCTTGATGTTGAAGAGGCGTGGTAGGCCTGTTGTGTAGTTGGGGCGGTCA
ATGTTTGGGATTTATACATTATTTTCCTATCACCAGGGCGTGCCCTTGTA
CGGTTTTGTCTTCTTTTGCGCTTTGATATCATCATGATACCCATGTGTTG
ATTATAGTTCTCATTCGCCCAAGCATACATATGACCGCACCCAGGCCTGC
CCCCCTTACCTTGTATCTGTTGATAAGGCAAACTATACCAGTTACAAACA
ATTATTGAACATAGCATAACAATACAATACTTAAGTCAC back to topCoding sequence (CDS) from alignment at ch2:1729506..1733944+ >KJC3_002121-T1 ID=KJC3_002121-T1|Name=KJC3_002121-T1|organism=Aspergillus niger KJC3|type=CDS|length=3636bp|location=Sequence derived from alignment at ch2:1729506..1733944+ (Aspergillus niger KJC3)
ATGCTGGGTCGACTGTTGAGCACTGCCGCGGCTACTCTCAATCCGGCGAC
CTACAACGCCAAAAACGCTCATCAACTAGAGTCCGTCACGGAGGAGGAAC
ATACATCCGGCTTACTATTCCCCGATGCTAGTCTTCTCCGACATTCCCAT
ACGCACGCATATCCGCTGCATACTGCCTACAATTCACCGAACGCTTCTAC
GGCTGGTGCCTATGATGATCGCGGCGGTGTCGAGTTGGACCCGTTGAAGG
ATTTCCGGGTGATAATAGCACAAAATGCGCTGGGAGATCGGGACGCTTGT
GTCCTGTTGGACACACGCGCCAGTTCGCAGGATCAGACTTCCATGGGACT
TGGGTTGGAACCTCAGGTGTTTGACAATACCACCGGTGCGAGACATGCCC
GTACGGTTTCAAATCTTACCCGTGGAACACGGCGGGGCTATTTGTCTCAG
TCGTCGGCTGCAGAGCCAAGCCCACTCTCTGTCGCTGCGGAGGCACGGAG
GTCACCTCCCATGTCGTCTGGCGCTTTCATGAGGGCTCGTGGTCGTAGTT
CCACCTTATCGCCGGCGGGAAGCTATAATGAACCTGGCCACCCTCGCTAT
GCTGCGGACTCGAATGACACGGGTCTGTTGAATTGCATTTTCGGCAGCAG
TGCGTTTAGCTATAGGGGATCGTCGACGAAGATGCATATCATCTCTGCCG
ATGATGAACCGGGCAAAACTGCACCTACATCTCCTGCAACCCGCAACTCG
CTGTCACGGGCGTACACAACTGGAAGTCAATCGGCCTTTACAAGCACCAA
TCGCGGGAATGAGTCCAGACCTCCAGCAAAGGTCACGATACTTCTGACTA
GAATGTTCAGCGTGCATCTGCCCGAAGGTGGCGAGACGTCTCCGGATGGC
ATGAACCCGGCTGGTTCTGTAAACCAGGAGTCTCTTCCGAACAGCGGTTT
CCCTTTTCCAGACGTCACGAAGCGTCGGAAGATCAAGGAGAAAAAGACAC
CGATGTATGCTGTGGCGATTACTATTCAAATTCCGCTCCTCTCTCGAAAC
GCAGGGCGGCCAGTTTCTCGGTTTAATGCCCAGGGTCCGGACTCTCCCAA
ACCGGGAATGTCGTGCTCCCTGGATTCCGACTATCGTTTCCGTGGAGGAT
TCCTCGATGACAGTTTGTCACTTGCAAGCCCGCCTGCGAGCCTGGATGAG
CGCATTGACCTTCTGGTTGATCATTGGGATGTCATCAACCGCGCCCTCTC
ACACTTAGAGAGACTGTCACGAAGAGAAATTCTCTTTCTGCTTAAGAAGG
TAGATTCTTCTTCGGCCATGCATCCAAAGCCAGCTAAGCCTCCAAATATG
CAACGAACAAATCAAACATTTGTCCACCTGCCTGCGAATATCTTGGCCGT
AAATTCCAGGCTACGAGACGAAGCAATCCGCAGCAGCCGTCGCATTAGCA
CGGCGCTGCAGATGCCATTCGTCGTAACCGGCCAGAATCGATGGGGCGTG
TGGCGTGAGGAGGGCCGCTCCATCATTCGCAGCATTGGGGATAAGGATCA
CAGCTTTTTCTTCCTTGTTCTCATTACAGCATTCCTGGGTAACCATACTG
AGTGGCTCAATTCTCTCGGCCCCGAATGGTACCGACGGAGGCATTATTTA
CAACAGAAGGCGCAGCAGGATTCTGACCCGCTTCTTGCTCACCGCACTGT
CATTATATCGTCTGACAAGATGACGGCGCGGAGACTTATTTTCTTGCTGG
CTGTATTCCTTCCACCGAAACAGCGTTTCGAGCCTCTGCCTTCCCCTATC
AGGCCGGGTACCGCAGCGTCGACGAGAGCCATTTCTCAGAGCCCGCCAAA
TGTCCCGGTTCTGCGGCAGGAGTCCCTGCGGAGAGTGATGGAACGTCGAT
CCCGCGCACAGCGCCTCACTCTCAGTGATAGAGAACAGCACCAGCGGTCC
GTGAGCGTTTCGTCGTGCGAGACGGCGCATCGCTCCACGGACGATGCCGA
GCCGTCGGTGACACCAGAGTTCAGTACCATGCGCCGGGGGTCCGACGCTC
GCTCCATTCGAGCATTAGGCGTGCCCGTCCACGCCAAGGATATGCGTGCG
AGGAATACAAGTGCGGCGACAACATCGACCACCACCCCTGGTAGTACTGT
CCCGGTCCCCCACTTTGCTTCTCAAGGCCGCTCCGAGCGTGCAGGGTCGG
ACCAGGCAGTGGCCGATGGGCCTGACAGCCTCGCGTCGGAAACGTTGCTC
AGGAGCCTCCAGCGAAGCGAAAGCACAAACACTAGTGCGAATGGCAGTGT
GCCATCTGCTAATGGTCGATGGGGCAACATATTCTCCGGTCTGTGGAGCG
CCCGTCAGGAATCGTCTACTGGTGACAGCGAATCTGTGGCACCAACCGAC
ACCCGCAAACGGTCCGTGTCAGCGTACACAAACCCTCCGAGGCGCCCTCC
TCCCACCTTGAGTCAGATGGTCAAAGAGGCCTCGCTCGGACCTACCGAAC
TCTCTCCGAAAAGCGCGACGAGCAATCATATCTCCATCCCGCAGCCTTCA
AATGCTCACAAGGGATATGAGGACGACGATGCTCCAGATGAGGCTGCGGC
TACGGACCAAGCGAGAGAGTCGTCGCTGAAGTTGTCGGTCCGAGGCGATG
ATGGGATTGTTGATGTTGATCTTCCTCTGCCCGGGTTCGTTTCGCTTTCT
TCATCAGGTGATTCCACGATGGCATCCCCGAAGAAGACGCGAACGTCAGT
CACTAGTGTTGATGCCGTGGCGTCTACGCACAGCAGCACATCTGGCTTCC
CTTCTACCTTGAAAGACAGTGATGGACCTAACATCAACGTTGCTGGCTGG
TTGAAGAGCTTCCATGATGACTTCTTGCTTCAAGCGGTTCGACCCTACAA
TGGGCTCGAGGCAGACATCAAGCGCGCCATGCAAGCAGAACCGATGTCAA
GCCAAGCCGCGTGCCTTGATGCGGACGGATCCGGACGATGGGTTGATGTT
GCGACCACTCTCATTGCTGATGTGCGAACCTTCACGGTGAAGCGGCTGCG
GCTACGTCGTAAAGTCGGTAGTGCGTCTTGGCGCAACACATCGCCTTCAT
TCTCTCCCCAACCGGGCACACCTCGTCATGTCTCTGGCGGCTCGGCGTCT
GCGTCTCAGCTGACCAGCTTCTTCTCCCAAGCTACCGCTTCTAGCAAATC
GTCTGCCAGTTCTACATCTGATGGGTTCGGCTCAAGTGATGTGGAAGAAC
GCTTCGTGGAGGAGCACGTGATGGATTTAGATGGCACGCTCGTTGACGCT
CTTGAGCGAGTCCTCGCTCAGAGCGGACCTTCCTCAATGGTACACTCCCG
GGCTCCGTCGCCCACACGCACTCGGCGTGCTGAGGACAAGCATATGTCAG
ATGTTCTGAGCCGGGATGAAATGCGTCCGGCGGAGGTTCCTCGGACCGAG
TGTCGCAAACTTGTCCTAAGCGCGCTCGATGAGGTCGTTCGCAGTGTAAC
GGCGGAACACTGCCGTGAAGATGATAGCGAGCTGGGGCCCACAGACCGGG
ACCGCCGGCGAGTCCAGACCGGAGGTGATAATACCTTACGGGAGGGCATT
CGTAAATGGCTCCTTGATGTTGAAGAGGCGTGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002121-T1.utr5p1 | KJC3_002121-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002121-T1.utr3p1 | KJC3_002121-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028084 |
| DBxref | PFAM:PF14636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1729506..1733944 + |
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