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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1770296..1772281+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002131-T1 ID=KJC3_002131-T1|Name=KJC3_002131-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1986bp|location=Sequence derived from alignment at ch2:1770296..1772281+ (Aspergillus niger KJC3)
TGCTATAAGGCAGTTTCTTCCTGCATGTGCTGGAATCATCCGGAGTAAGG
TTGTTCTAATGCCGACGCAAATCCCGAGTCACACCGAACCTTATCGGAAG
TGGATGCGCTTCCGCGGTTCGTGCCTGAACCCTTGTTTTTAGACTGACAG
GCGCAGAGTACATATTGTGACGGCTATCATGAAGTTAAATAAGTGTTGAA
TCCATGGCTTAAAGTATGCGACCCGTCTTCATCCATGGTAATTAGTCACC
GAGATACTGGAACAGCAAACGTTATGGAAGACAGTATATCAGACTTAGAC
ACAGTGGACTATGATATGGAGCGGTATGTATCTATCCATTCATCTATATT
CTGCACCAACGACTGACTGAAAGAAAGAGAGACAGAGAGCTTCGATACTG
AGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACACGC
TTGGAGCAACATCCGTGGCCGATTGACGAGGTGAGCCCCTTACTTGTATT
GGAATGCTGCAGCTAACAAGTTGAAGTTAGAGAAAGACAGACTAGGTATG
GGTATCTGCTACGATATAATATCCCTAGCTAATAATGGAGTAGAGGAACA
ACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCTA
TACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTGG
GCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTGTTCTTTATCCG
GGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTCGACTGTAAGTC
TGAAGACATTATGCATCGATGCAAAGGAACTGACCAGTTAGGTTCGCGGC
ATCGATTTAGTAAACATGCAAGAGGAATGGTACGACTTCCTTGCGTGGCA
TGGCCCTAAATTCCAACTAATTGATATAGGGTACCACCAAACTGCGAGTT
TTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATACGCAAATA
TTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCA
CTTCTGCTCGAGGGATCATTTAGGTAATCACTCTCCTAGAAGGAATTTTC
ACCGCCAGACCAACTCATCATAAATCTAGTTGCTGCGCCCTAGGCGGGTG
GGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGACA
GTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGAT
GGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCA
TGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCACTG
CGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGA
CTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTT
CGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCA
AGATTGAGGGATATTTGCAAATGTCGGTGAGCTTCTTGCATGATTATGAC
ACGATTCTAACCCTTCACAGACAGGTTGTGTACGGACAGAAACCGGGTTA
GCTGAGTTGAATGACCGATGAAAACTTAGGTTCCCTGCATCATCAGGACA
ATAGACTATGTAGTATATATCTCGTAGCCGCGATGATCGCGCTAATCGAC
GGAAGACGTTAGGATGTATCGGGTCCAGCAAAGCTTTCTCATAACATTCC
ACGTCAAACATATACTATCTGATAATATAGCGTATGGCTGCTTTCCATAC
TCGGCATATCTTCCCTGATGTACCCCGGTCAACTTTTATGATCAACGTGT
GGAACACAACAAACCCTTTAATGCAGTTAGGGATGACTTTTTTTGGACTG
AACTTATTACCTGGCATATACTATTCCCATACAGCCCCAGTGTGTCCTGC
CACTTATCATTATCCAATGCCATGCAAACAATCCAG back to topCoding sequence (CDS) from alignment at ch2:1770296..1772281+ >KJC3_002131-T1 ID=KJC3_002131-T1|Name=KJC3_002131-T1|organism=Aspergillus niger KJC3|type=CDS|length=8262bp|location=Sequence derived from alignment at ch2:1770296..1772281+ (Aspergillus niger KJC3)
ATGGAAGACAGTATATCAGACTTAGACACAGTGGACTATGATATGGAGCG
AGAGACAGAGAGCTTCGATACTGAGCCCCATCCGAACCTGTACAGGCATG
GTCGACGCTATTCCTTGACACGCTTGGAGCAACATCCGTGGCCGATTGAC
GAGTTAGAGAAAGACAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCT
GTTCCAGGATAGATTATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCC
TTGACATTCGCACTGGCACTGGTTGCTGGGCTATGGAATGTGAAAGATAT
CCTTCGTCGACTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATG
GGTACCACCAAACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCT
GGCATACCCAATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAG
GGTGATCGCCAGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTG
CGCCCTAGGCGGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATA
ACCCTGGTGAAGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACA
GCCCACGCCAGAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGC
GGAACTCAGTCAGCATGGATTTACCAACGTCACTCAACATACTTACGCTA
TACCTCTATGCACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAG
AACTGGGCGGCAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTA
CCTTGGAAAGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTC
GGGCACTAAAGGGCAAGATTGAGGGATATTTGCAAATACAGGTTGTGTAC
GGACAGAAACCGGGTTAGATGGAAGACAGTATATCAGACTTAGACACAGT
GGACTATGATATGGAGCGAGAGACAGAGAGCTTCGATACTGAGCCCCATC
CGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACACGCTTGGAGCAA
CATCCGTGGCCGATTGACGAGTTAGAGAAAGACAGACTAGAGGAACAACA
CGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCTATAC
AGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTGGGCT
ATGGAATGTGAAAGATATCCTTCGTCGACTGTTCGCGGCATCGATTTAGT
AAACATGCAAGAGGAATGGGTACCACCAAACTGCGAGTTTTGGGTCGACA
ACCTTTGTGAACCAGGCTGGCATACCCAATACGCAAATATTGACTTAGTC
CATATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCACTTCTGCTCGA
GGGATCATTTAGTTGCTGCGCCCTAGGCGGGTGGGTGGAGATATGTGATA
TGAGAGTTAAACTAGATAACCCTGGTGAAGACAGTCCATTCCACAGTTAC
ATCCGGGAGATGACGACAGCCCACGCCAGAGATGGTCGCCAGTTGGATCT
TCCTCTTCATTTCGGAGCGGAACTCAGTCAGCATGGATTTACCAACGTCA
CTCAACATACTTACGCTATACCTCTATGCACTGCGGGCCGCGACGAATTG
ACGAAAAAGATCATTCAGAACTGGGCGGCAGGACTGGAAGGGTACAGTTT
CACACTACTGGAAAAGTACCTTGGAAAGAGCTTCGCGGAAACTGTGCTCA
TGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCAAGATTGAGGGATATTTG
CAAATACAGGTTGTGTACGGACAGAAACCGGGTTAGATGGAAGACAGTAT
ATCAGACTTAGACACAGTGGACTATGATATGGAGCGAGAGACAGAGAGCT
TCGATACTGAGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTATTCC
TTGACACGCTTGGAGCAACATCCGTGGCCGATTGACGAGTTAGAGAAAGA
CAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGAT
TATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACT
GGCACTGGTTGCTGGGCTATGGAATGTGAAAGATATCCTTCGTCGACTGT
TCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCAAACT
GCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATAC
GCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCT
CTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGGGT
GGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGAC
AGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGA
TGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGC
ATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCACT
GCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGG
ACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCT
TCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGC
AAGATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAGAAACCGGG
TTAGATGGAAGACAGTATATCAGACTTAGACACAGTGGACTATGATATGG
AGCGAGAGACAGAGAGCTTCGATACTGAGCCCCATCCGAACCTGTACAGG
CATGGTCGACGCTATTCCTTGACACGCTTGGAGCAACATCCGTGGCCGAT
TGACGAGTTAGAGAAAGACAGACTAGAGGAACAACACGTTTTGCTTCGTG
AGCTGTTCCAGGATAGATTATACCTCGCCCCTATACAGAGTCCGCGAAGC
GTCCTTGACATTCGCACTGGCACTGGTTGCTGGGCTATGGAATGTGAAAG
ATATCCTTCGTCGACTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGG
AATGGGTACCACCAAACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCA
GGCTGGCATACCCAATACGCAAATATTGACTTAGTCCATATTAATCAGAT
CCAGGGTGATCGCCAGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTT
GCTGCGCCCTAGGCGGGTGGGTGGAGATATGTGATATGAGAGTTAAACTA
GATAACCCTGGTGAAGACAGTCCATTCCACAGTTACATCCGGGAGATGAC
GACAGCCCACGCCAGAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCG
GAGCGGAACTCAGTCAGCATGGATTTACCAACGTCACTCAACATACTTAC
GCTATACCTCTATGCACTGCGGGCCGCGACGAATTGACGAAAAAGATCAT
TCAGAACTGGGCGGCAGGACTGGAAGGGTACAGTTTCACACTACTGGAAA
AGTACCTTGGAAAGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCG
CGTCGGGCACTAAAGGGCAAGATTGAGGGATATTTGCAAATACAGGTTGT
GTACGGACAGAAACCGGGTTAGATGGAAGACAGTATATCAGACTTAGACA
CAGTGGACTATGATATGGAGCGAGAGACAGAGAGCTTCGATACTGAGCCC
CATCCGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACACGCTTGGA
GCAACATCCGTGGCCGATTGACGAGTTAGAGAAAGACAGACTAGAGGAAC
AACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCT
ATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTG
GGCTATGGAATGTGAAAGATATCCTTCGTCGACTGTTCGCGGCATCGATT
TAGTAAACATGCAAGAGGAATGGGTACCACCAAACTGCGAGTTTTGGGTC
GACAACCTTTGTGAACCAGGCTGGCATACCCAATACGCAAATATTGACTT
AGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCACTTCTGC
TCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGGGTGGGTGGAGATATGT
GATATGAGAGTTAAACTAGATAACCCTGGTGAAGACAGTCCATTCCACAG
TTACATCCGGGAGATGACGACAGCCCACGCCAGAGATGGTCGCCAGTTGG
ATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCATGGATTTACCAAC
GTCACTCAACATACTTACGCTATACCTCTATGCACTGCGGGCCGCGACGA
ATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGACTGGAAGGGTACA
GTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTTCGCGGAAACTGTG
CTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCAAGATTGAGGGATA
TTTGCAAATACAGGTTGTGTACGGACAGAAACCGGGTTAGATGGAAGACA
GTATATCAGACTTAGACACAGTGGACTATGATATGGAGCGAGAGACAGAG
AGCTTCGATACTGAGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTA
TTCCTTGACACGCTTGGAGCAACATCCGTGGCCGATTGACGAGTTAGAGA
AAGACAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGAT
AGATTATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCG
CACTGGCACTGGTTGCTGGGCTATGGAATGTGAAAGATATCCTTCGTCGA
CTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCA
AACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCA
ATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCC
AGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGC
GGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGA
AGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCA
GAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGT
CAGCATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATG
CACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGG
CAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAG
AGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAA
GGGCAAGATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAGAAAC
CGGGTTAGATGGAAGACAGTATATCAGACTTAGACACAGTGGACTATGAT
ATGGAGCGAGAGACAGAGAGCTTCGATACTGAGCCCCATCCGAACCTGTA
CAGGCATGGTCGACGCTATTCCTTGACACGCTTGGAGCAACATCCGTGGC
CGATTGACGAGTTAGAGAAAGACAGACTAGAGGAACAACACGTTTTGCTT
CGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCTATACAGAGTCCGCG
AAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTGGGCTATGGAATGTG
AAAGATATCCTTCGTCGACTGTTCGCGGCATCGATTTAGTAAACATGCAA
GAGGAATGGGTACCACCAAACTGCGAGTTTTGGGTCGACAACCTTTGTGA
ACCAGGCTGGCATACCCAATACGCAAATATTGACTTAGTCCATATTAATC
AGATCCAGGGTGATCGCCAGCTCTTGTCACTTCTGCTCGAGGGATCATTT
AGTTGCTGCGCCCTAGGCGGGTGGGTGGAGATATGTGATATGAGAGTTAA
ACTAGATAACCCTGGTGAAGACAGTCCATTCCACAGTTACATCCGGGAGA
TGACGACAGCCCACGCCAGAGATGGTCGCCAGTTGGATCTTCCTCTTCAT
TTCGGAGCGGAACTCAGTCAGCATGGATTTACCAACGTCACTCAACATAC
TTACGCTATACCTCTATGCACTGCGGGCCGCGACGAATTGACGAAAAAGA
TCATTCAGAACTGGGCGGCAGGACTGGAAGGGTACAGTTTCACACTACTG
GAAAAGTACCTTGGAAAGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTC
AGCGCGTCGGGCACTAAAGGGCAAGATTGAGGGATATTTGCAAATACAGG
TTGTGTACGGACAGAAACCGGGTTAGATGGAAGACAGTATATCAGACTTA
GACACAGTGGACTATGATATGGAGCGAGAGACAGAGAGCTTCGATACTGA
GCCCCATCCGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACACGCT
TGGAGCAACATCCGTGGCCGATTGACGAGTTAGAGAAAGACAGACTAGAG
GAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGC
CCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTT
GCTGGGCTATGGAATGTGAAAGATATCCTTCGTCGACTGTTCGCGGCATC
GATTTAGTAAACATGCAAGAGGAATGGGTACCACCAAACTGCGAGTTTTG
GGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATACGCAAATATTG
ACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCACTT
CTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGGGTGGGTGGAGAT
ATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGACAGTCCATTCC
ACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGATGGTCGCCAG
TTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCATGGATTTAC
CAACGTCACTCAACATACTTACGCTATACCTCTATGCACTGCGGGCCGCG
ACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGACTGGAAGGG
TACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTTCGCGGAAAC
TGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCAAGATTGAGG
GATATTTGCAAATACAGGTTGTGTACGGACAGAAACCGGGTTAGATGGAA
GACAGTATATCAGACTTAGACACAGTGGACTATGATATGGAGCGAGAGAC
AGAGAGCTTCGATACTGAGCCCCATCCGAACCTGTACAGGCATGGTCGAC
GCTATTCCTTGACACGCTTGGAGCAACATCCGTGGCCGATTGACGAGTTA
GAGAAAGACAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCA
GGATAGATTATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACA
TTCGCACTGGCACTGGTTGCTGGGCTATGGAATGTGAAAGATATCCTTCG
TCGACTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACC
ACCAAACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATA
CCCAATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGAT
CGCCAGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCT
AGGCGGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTG
GTGAAGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCAC
GCCAGAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACT
CAGTCAGCATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTC
TATGCACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGG
GCGGCAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGG
AAAGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCAC
TAAAGGGCAAGATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAG
AAACCGGGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002131-T1.utr3p1 | KJC3_002131-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13489 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1770296..1772281 + |
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