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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1770296..1772281+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002131-T2 ID=KJC3_002131-T2|Name=KJC3_002131-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1986bp|location=Sequence derived from alignment at ch2:1770296..1772281+ (Aspergillus niger KJC3)
TGCTATAAGGCAGTTTCTTCCTGCATGTGCTGGAATCATCCGGAGTAAGG
TTGTTCTAATGCCGACGCAAATCCCGAGTCACACCGAACCTTATCGGAAG
TGGATGCGCTTCCGCGGTTCGTGCCTGAACCCTTGTTTTTAGACTGACAG
GCGCAGAGTACATATTGTGACGGCTATCATGAAGTTAAATAAGTGTTGAA
TCCATGGCTTAAAGTATGCGACCCGTCTTCATCCATGGTAATTAGTCACC
GAGATACTGGAACAGCAAACGTTATGGAAGACAGTATATCAGACTTAGAC
ACAGTGGACTATGATATGGAGCGGTATGTATCTATCCATTCATCTATATT
CTGCACCAACGACTGACTGAAAGAAAGAGAGACAGAGAGCTTCGATACTG
AGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACACGC
TTGGAGCAACATCCGTGGCCGATTGACGAGGTGAGCCCCTTACTTGTATT
GGAATGCTGCAGCTAACAAGTTGAAGTTAGAGAAAGACAGACTAGGTATG
GGTATCTGCTACGATATAATATCCCTAGCTAATAATGGAGTAGAGGAACA
ACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCTA
TACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTGG
GCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTGTTCTTTATCCG
GGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTCGACTGTAAGTC
TGAAGACATTATGCATCGATGCAAAGGAACTGACCAGTTAGGTTCGCGGC
ATCGATTTAGTAAACATGCAAGAGGAATGGTACGACTTCCTTGCGTGGCA
TGGCCCTAAATTCCAACTAATTGATATAGGGTACCACCAAACTGCGAGTT
TTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATACGCAAATA
TTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCA
CTTCTGCTCGAGGGATCATTTAGGTAATCACTCTCCTAGAAGGAATTTTC
ACCGCCAGACCAACTCATCATAAATCTAGTTGCTGCGCCCTAGGCGGGTG
GGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGACA
GTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGAT
GGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCA
TGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCACTG
CGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGA
CTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTT
CGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCA
AGATTGAGGGATATTTGCAAATGTCGGTGAGCTTCTTGCATGATTATGAC
ACGATTCTAACCCTTCACAGACAGGTTGTGTACGGACAGAAACCGGGTTA
GCTGAGTTGAATGACCGATGAAAACTTAGGTTCCCTGCATCATCAGGACA
ATAGACTATGTAGTATATATCTCGTAGCCGCGATGATCGCGCTAATCGAC
GGAAGACGTTAGGATGTATCGGGTCCAGCAAAGCTTTCTCATAACATTCC
ACGTCAAACATATACTATCTGATAATATAGCGTATGGCTGCTTTCCATAC
TCGGCATATCTTCCCTGATGTACCCCGGTCAACTTTTATGATCAACGTGT
GGAACACAACAAACCCTTTAATGCAGTTAGGGATGACTTTTTTTGGACTG
AACTTATTACCTGGCATATACTATTCCCATACAGCCCCAGTGTGTCCTGC
CACTTATCATTATCCAATGCCATGCAAACAATCCAG back to topCoding sequence (CDS) from alignment at ch2:1770296..1772281+ >KJC3_002131-T2 ID=KJC3_002131-T2|Name=KJC3_002131-T2|organism=Aspergillus niger KJC3|type=CDS|length=8064bp|location=Sequence derived from alignment at ch2:1770296..1772281+ (Aspergillus niger KJC3)
ATGGTAATTAGTCACCGAGATACTGGAACAGCAAACGTTATGGAAGACAG
TATATCAGACTTAGACACAGTGGACTATGATATGGAGCGAGAGACAGAGA
GCTTCGATACTGAGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTAT
TCCTTGACACGCTTGGAGCAACATCCGTGGCCGATTGACGAGTTAGAGAA
AGACAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATA
GATTATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGC
ACTGGCACTGGTTGCTGGGCTATGGAATGTGCAGAAAGATATCCTTCGTC
GACTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCAC
CAAACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACC
CAATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCG
CCAGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAG
GCGGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGT
GAAGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGC
CAGAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCA
GTCAGCATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTA
TGCACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGC
GGCAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAA
AGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTA
AAGGGCAAGATTGAGGGATATTTGCAAATGTCGGTGAGCTTCTTGCATGA
TTATGACACGATTCTAACCCTTCACAGACAGGTTGTGTACGGACAGAAAC
CGGGTTAGATGGTAATTAGTCACCGAGATACTGGAACAGCAAACGTTATG
GAAGACAGTATATCAGACTTAGACACAGTGGACTATGATATGGAGCGAGA
GACAGAGAGCTTCGATACTGAGCCCCATCCGAACCTGTACAGGCATGGTC
GACGCTATTCCTTGACACGCTTGGAGCAACATCCGTGGCCGATTGACGAG
TTAGAGAAAGACAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTT
CCAGGATAGATTATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTG
ACATTCGCACTGGCACTGGTTGCTGGGCTATGGAATGTGCAGAAAGATAT
CCTTCGTCGACTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATG
GGTACCACCAAACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCT
GGCATACCCAATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAG
GGTGATCGCCAGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTG
CGCCCTAGGCGGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATA
ACCCTGGTGAAGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACA
GCCCACGCCAGAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGC
GGAACTCAGTCAGCATGGATTTACCAACGTCACTCAACATACTTACGCTA
TACCTCTATGCACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAG
AACTGGGCGGCAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTA
CCTTGGAAAGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTC
GGGCACTAAAGGGCAAGATTGAGGGATATTTGCAAATGTCGGTGAGCTTC
TTGCATGATTATGACACGATTCTAACCCTTCACAGACAGGTTGTGTACGG
ACAGAAACCGGGTTAGATGGTAATTAGTCACCGAGATACTGGAACAGCAA
ACGTTATGGAAGACAGTATATCAGACTTAGACACAGTGGACTATGATATG
GAGCGAGAGACAGAGAGCTTCGATACTGAGCCCCATCCGAACCTGTACAG
GCATGGTCGACGCTATTCCTTGACACGCTTGGAGCAACATCCGTGGCCGA
TTGACGAGTTAGAGAAAGACAGACTAGAGGAACAACACGTTTTGCTTCGT
GAGCTGTTCCAGGATAGATTATACCTCGCCCCTATACAGAGTCCGCGAAG
CGTCCTTGACATTCGCACTGGCACTGGTTGCTGGGCTATGGAATGTGCAG
AAAGATATCCTTCGTCGACTGTTCGCGGCATCGATTTAGTAAACATGCAA
GAGGAATGGGTACCACCAAACTGCGAGTTTTGGGTCGACAACCTTTGTGA
ACCAGGCTGGCATACCCAATACGCAAATATTGACTTAGTCCATATTAATC
AGATCCAGGGTGATCGCCAGCTCTTGTCACTTCTGCTCGAGGGATCATTT
AGTTGCTGCGCCCTAGGCGGGTGGGTGGAGATATGTGATATGAGAGTTAA
ACTAGATAACCCTGGTGAAGACAGTCCATTCCACAGTTACATCCGGGAGA
TGACGACAGCCCACGCCAGAGATGGTCGCCAGTTGGATCTTCCTCTTCAT
TTCGGAGCGGAACTCAGTCAGCATGGATTTACCAACGTCACTCAACATAC
TTACGCTATACCTCTATGCACTGCGGGCCGCGACGAATTGACGAAAAAGA
TCATTCAGAACTGGGCGGCAGGACTGGAAGGGTACAGTTTCACACTACTG
GAAAAGTACCTTGGAAAGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTC
AGCGCGTCGGGCACTAAAGGGCAAGATTGAGGGATATTTGCAAATGTCGG
TGAGCTTCTTGCATGATTATGACACGATTCTAACCCTTCACAGACAGGTT
GTGTACGGACAGAAACCGGGTTAGATGGTAATTAGTCACCGAGATACTGG
AACAGCAAACGTTATGGAAGACAGTATATCAGACTTAGACACAGTGGACT
ATGATATGGAGCGAGAGACAGAGAGCTTCGATACTGAGCCCCATCCGAAC
CTGTACAGGCATGGTCGACGCTATTCCTTGACACGCTTGGAGCAACATCC
GTGGCCGATTGACGAGTTAGAGAAAGACAGACTAGAGGAACAACACGTTT
TGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCTATACAGAGT
CCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTGGGCTATGGA
ATGTGCAGAAAGATATCCTTCGTCGACTGTTCGCGGCATCGATTTAGTAA
ACATGCAAGAGGAATGGGTACCACCAAACTGCGAGTTTTGGGTCGACAAC
CTTTGTGAACCAGGCTGGCATACCCAATACGCAAATATTGACTTAGTCCA
TATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCACTTCTGCTCGAGG
GATCATTTAGTTGCTGCGCCCTAGGCGGGTGGGTGGAGATATGTGATATG
AGAGTTAAACTAGATAACCCTGGTGAAGACAGTCCATTCCACAGTTACAT
CCGGGAGATGACGACAGCCCACGCCAGAGATGGTCGCCAGTTGGATCTTC
CTCTTCATTTCGGAGCGGAACTCAGTCAGCATGGATTTACCAACGTCACT
CAACATACTTACGCTATACCTCTATGCACTGCGGGCCGCGACGAATTGAC
GAAAAAGATCATTCAGAACTGGGCGGCAGGACTGGAAGGGTACAGTTTCA
CACTACTGGAAAAGTACCTTGGAAAGAGCTTCGCGGAAACTGTGCTCATG
TGCGCTTCAGCGCGTCGGGCACTAAAGGGCAAGATTGAGGGATATTTGCA
AATGTCGGTGAGCTTCTTGCATGATTATGACACGATTCTAACCCTTCACA
GACAGGTTGTGTACGGACAGAAACCGGGTTAGATGGTAATTAGTCACCGA
GATACTGGAACAGCAAACGTTATGGAAGACAGTATATCAGACTTAGACAC
AGTGGACTATGATATGGAGCGAGAGACAGAGAGCTTCGATACTGAGCCCC
ATCCGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACACGCTTGGAG
CAACATCCGTGGCCGATTGACGAGTTAGAGAAAGACAGACTAGAGGAACA
ACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCTA
TACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTGG
GCTATGGAATGTGCAGAAAGATATCCTTCGTCGACTGTTCGCGGCATCGA
TTTAGTAAACATGCAAGAGGAATGGGTACCACCAAACTGCGAGTTTTGGG
TCGACAACCTTTGTGAACCAGGCTGGCATACCCAATACGCAAATATTGAC
TTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCACTTCT
GCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGGGTGGGTGGAGATAT
GTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGACAGTCCATTCCAC
AGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGATGGTCGCCAGTT
GGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCATGGATTTACCA
ACGTCACTCAACATACTTACGCTATACCTCTATGCACTGCGGGCCGCGAC
GAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGACTGGAAGGGTA
CAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTTCGCGGAAACTG
TGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCAAGATTGAGGGA
TATTTGCAAATGTCGGTGAGCTTCTTGCATGATTATGACACGATTCTAAC
CCTTCACAGACAGGTTGTGTACGGACAGAAACCGGGTTAGATGGTAATTA
GTCACCGAGATACTGGAACAGCAAACGTTATGGAAGACAGTATATCAGAC
TTAGACACAGTGGACTATGATATGGAGCGAGAGACAGAGAGCTTCGATAC
TGAGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACAC
GCTTGGAGCAACATCCGTGGCCGATTGACGAGTTAGAGAAAGACAGACTA
GAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCT
CGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTG
GTTGCTGGGCTATGGAATGTGCAGAAAGATATCCTTCGTCGACTGTTCGC
GGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCAAACTGCGA
GTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATACGCAA
ATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCTTG
TCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGGGTGGGT
GGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGACAGTC
CATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGATGGT
CGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCATGG
ATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCACTGCGG
GCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGACTG
GAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTTCGC
GGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCAAGA
TTGAGGGATATTTGCAAATGTCGGTGAGCTTCTTGCATGATTATGACACG
ATTCTAACCCTTCACAGACAGGTTGTGTACGGACAGAAACCGGGTTAGAT
GGTAATTAGTCACCGAGATACTGGAACAGCAAACGTTATGGAAGACAGTA
TATCAGACTTAGACACAGTGGACTATGATATGGAGCGAGAGACAGAGAGC
TTCGATACTGAGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTATTC
CTTGACACGCTTGGAGCAACATCCGTGGCCGATTGACGAGTTAGAGAAAG
ACAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGA
TTATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCAC
TGGCACTGGTTGCTGGGCTATGGAATGTGCAGAAAGATATCCTTCGTCGA
CTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCA
AACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCA
ATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCC
AGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGC
GGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGA
AGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCA
GAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGT
CAGCATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATG
CACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGG
CAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAG
AGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAA
GGGCAAGATTGAGGGATATTTGCAAATGTCGGTGAGCTTCTTGCATGATT
ATGACACGATTCTAACCCTTCACAGACAGGTTGTGTACGGACAGAAACCG
GGTTAGATGGTAATTAGTCACCGAGATACTGGAACAGCAAACGTTATGGA
AGACAGTATATCAGACTTAGACACAGTGGACTATGATATGGAGCGAGAGA
CAGAGAGCTTCGATACTGAGCCCCATCCGAACCTGTACAGGCATGGTCGA
CGCTATTCCTTGACACGCTTGGAGCAACATCCGTGGCCGATTGACGAGTT
AGAGAAAGACAGACTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCC
AGGATAGATTATACCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGAC
ATTCGCACTGGCACTGGTTGCTGGGCTATGGAATGTGCAGAAAGATATCC
TTCGTCGACTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGG
TACCACCAAACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGG
CATACCCAATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGG
TGATCGCCAGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCG
CCCTAGGCGGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAAC
CCTGGTGAAGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGC
CCACGCCAGAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGG
AACTCAGTCAGCATGGATTTACCAACGTCACTCAACATACTTACGCTATA
CCTCTATGCACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAA
CTGGGCGGCAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACC
TTGGAAAGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGG
GCACTAAAGGGCAAGATTGAGGGATATTTGCAAATGTCGGTGAGCTTCTT
GCATGATTATGACACGATTCTAACCCTTCACAGACAGGTTGTGTACGGAC
AGAAACCGGGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002131-T2.utr5p1 | KJC3_002131-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002131-T2.utr3p1 | KJC3_002131-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13489 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1770296..1772281 + |
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