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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1770296..1772281+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002131-T3 ID=KJC3_002131-T3|Name=KJC3_002131-T3|organism=Aspergillus niger KJC3|type=mRNA|length=1986bp|location=Sequence derived from alignment at ch2:1770296..1772281+ (Aspergillus niger KJC3)
TGCTATAAGGCAGTTTCTTCCTGCATGTGCTGGAATCATCCGGAGTAAGG
TTGTTCTAATGCCGACGCAAATCCCGAGTCACACCGAACCTTATCGGAAG
TGGATGCGCTTCCGCGGTTCGTGCCTGAACCCTTGTTTTTAGACTGACAG
GCGCAGAGTACATATTGTGACGGCTATCATGAAGTTAAATAAGTGTTGAA
TCCATGGCTTAAAGTATGCGACCCGTCTTCATCCATGGTAATTAGTCACC
GAGATACTGGAACAGCAAACGTTATGGAAGACAGTATATCAGACTTAGAC
ACAGTGGACTATGATATGGAGCGGTATGTATCTATCCATTCATCTATATT
CTGCACCAACGACTGACTGAAAGAAAGAGAGACAGAGAGCTTCGATACTG
AGCCCCATCCGAACCTGTACAGGCATGGTCGACGCTATTCCTTGACACGC
TTGGAGCAACATCCGTGGCCGATTGACGAGGTGAGCCCCTTACTTGTATT
GGAATGCTGCAGCTAACAAGTTGAAGTTAGAGAAAGACAGACTAGGTATG
GGTATCTGCTACGATATAATATCCCTAGCTAATAATGGAGTAGAGGAACA
ACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCCCTA
TACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGCTGG
GCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTGTTCTTTATCCG
GGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTCGACTGTAAGTC
TGAAGACATTATGCATCGATGCAAAGGAACTGACCAGTTAGGTTCGCGGC
ATCGATTTAGTAAACATGCAAGAGGAATGGTACGACTTCCTTGCGTGGCA
TGGCCCTAAATTCCAACTAATTGATATAGGGTACCACCAAACTGCGAGTT
TTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATACGCAAATA
TTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCTTGTCA
CTTCTGCTCGAGGGATCATTTAGGTAATCACTCTCCTAGAAGGAATTTTC
ACCGCCAGACCAACTCATCATAAATCTAGTTGCTGCGCCCTAGGCGGGTG
GGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGACA
GTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGAT
GGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCA
TGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCACTG
CGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGA
CTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTT
CGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCA
AGATTGAGGGATATTTGCAAATGTCGGTGAGCTTCTTGCATGATTATGAC
ACGATTCTAACCCTTCACAGACAGGTTGTGTACGGACAGAAACCGGGTTA
GCTGAGTTGAATGACCGATGAAAACTTAGGTTCCCTGCATCATCAGGACA
ATAGACTATGTAGTATATATCTCGTAGCCGCGATGATCGCGCTAATCGAC
GGAAGACGTTAGGATGTATCGGGTCCAGCAAAGCTTTCTCATAACATTCC
ACGTCAAACATATACTATCTGATAATATAGCGTATGGCTGCTTTCCATAC
TCGGCATATCTTCCCTGATGTACCCCGGTCAACTTTTATGATCAACGTGT
GGAACACAACAAACCCTTTAATGCAGTTAGGGATGACTTTTTTTGGACTG
AACTTATTACCTGGCATATACTATTCCCATACAGCCCCAGTGTGTCCTGC
CACTTATCATTATCCAATGCCATGCAAACAATCCAG back to topCoding sequence (CDS) from alignment at ch2:1770296..1772281+ >KJC3_002131-T3 ID=KJC3_002131-T3|Name=KJC3_002131-T3|organism=Aspergillus niger KJC3|type=CDS|length=4260bp|location=Sequence derived from alignment at ch2:1770296..1772281+ (Aspergillus niger KJC3)
ATGGGTATCTGCTACGATATAATATCCCTAGCTAATAATGGAGTAGAGGA
ACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGCCC
CTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTTGC
TGGGCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTGTTCTTTAT
CCGGGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTCGACTGTTC
GCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCAAACTGC
GAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATACGC
AAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCTCT
TGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGGGTGG
GTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGACAG
TCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGATG
GTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGCAT
GGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCACTGC
GGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGGAC
TGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCTTC
GCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGCAA
GATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAGAAACCGGGTT
AGATGGGTATCTGCTACGATATAATATCCCTAGCTAATAATGGAGTAGAG
GAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTCGC
CCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGGTT
GCTGGGCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTGTTCTTT
ATCCGGGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTCGACTGT
TCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCAAACT
GCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAATAC
GCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAGCT
CTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGGGT
GGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAGAC
AGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGAGA
TGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCAGC
ATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCACT
GCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCAGG
ACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAGCT
TCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGGGC
AAGATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAGAAACCGGG
TTAGATGGGTATCTGCTACGATATAATATCCCTAGCTAATAATGGAGTAG
AGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACCTC
GCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACTGG
TTGCTGGGCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTGTTCT
TTATCCGGGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTCGACT
GTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCAAA
CTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCAAT
ACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCCAG
CTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGCGG
GTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGAAG
ACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCAGA
GATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGTCA
GCATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATGCA
CTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGGCA
GGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAGAG
CTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAAGG
GCAAGATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAGAAACCG
GGTTAGATGGGTATCTGCTACGATATAATATCCCTAGCTAATAATGGAGT
AGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATACC
TCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCACT
GGTTGCTGGGCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTGTT
CTTTATCCGGGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTCGA
CTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCACCA
AACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACCCA
ATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCGCC
AGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAGGC
GGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGTGA
AGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGCCA
GAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCAGT
CAGCATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTATG
CACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGCGG
CAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAAAG
AGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTAAA
GGGCAAGATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAGAAAC
CGGGTTAGATGGGTATCTGCTACGATATAATATCCCTAGCTAATAATGGA
GTAGAGGAACAACACGTTTTGCTTCGTGAGCTGTTCCAGGATAGATTATA
CCTCGCCCCTATACAGAGTCCGCGAAGCGTCCTTGACATTCGCACTGGCA
CTGGTTGCTGGGCTATGGAATGTGGTATGTTCAAGCTGTATTTACGATTG
TTCTTTATCCGGGGATTAATATATTATGCAGCAGAAAGATATCCTTCGTC
GACTGTTCGCGGCATCGATTTAGTAAACATGCAAGAGGAATGGGTACCAC
CAAACTGCGAGTTTTGGGTCGACAACCTTTGTGAACCAGGCTGGCATACC
CAATACGCAAATATTGACTTAGTCCATATTAATCAGATCCAGGGTGATCG
CCAGCTCTTGTCACTTCTGCTCGAGGGATCATTTAGTTGCTGCGCCCTAG
GCGGGTGGGTGGAGATATGTGATATGAGAGTTAAACTAGATAACCCTGGT
GAAGACAGTCCATTCCACAGTTACATCCGGGAGATGACGACAGCCCACGC
CAGAGATGGTCGCCAGTTGGATCTTCCTCTTCATTTCGGAGCGGAACTCA
GTCAGCATGGATTTACCAACGTCACTCAACATACTTACGCTATACCTCTA
TGCACTGCGGGCCGCGACGAATTGACGAAAAAGATCATTCAGAACTGGGC
GGCAGGACTGGAAGGGTACAGTTTCACACTACTGGAAAAGTACCTTGGAA
AGAGCTTCGCGGAAACTGTGCTCATGTGCGCTTCAGCGCGTCGGGCACTA
AAGGGCAAGATTGAGGGATATTTGCAAATACAGGTTGTGTACGGACAGAA
ACCGGGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002131-T3.utr3p1 | KJC3_002131-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1770296..1772281 + |
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