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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1781125..1783225+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002135-T1 ID=KJC3_002135-T1|Name=KJC3_002135-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2101bp|location=Sequence derived from alignment at ch2:1781125..1783225+ (Aspergillus niger KJC3)
AAAGCCCCCAACGTTGCGCTTTCTGACCACCTGAAATCTGACAATCAGCA
ATCCTTCAGCTCTTCTCAGCATCTCTTGGGGCCGATCCCCATCGGATGGA
CACACCTCATCCCTCATTAGGCATGGCTGAGCTGCATGTCAGCGGAGTCC
CAACACCCAAACCAATCCTTTAGCGCGCACCGGGCCTGCGAAGCCATCAC
CATCGCCCGCCTTGCAGCAATGTGCCCCCCGGTCGCATTCCTTTCGTTTC
ATAATCTCACCTCCGGCCAGCCCATATCCTTCATCTCGCAGCTTTTCCCT
ACTCCTTCTTTTCTTTTGCTTTCTTCCCCCATCGCAGGCTGTTTGAATGC
CTGCTGAAGTATCCATGGTATGATGCGACCGATACTTCTCCCCCTATTGG
GGGTATTTCTGCAGACCTCCTCGGCATCCAATCCCTATGTAATGAGCTGG
TCTTCCCAAGCCTACGGTCCAGATGGCCCGTGGCAGGCCGTATCCATCGA
CGTGGGCAGCAACCAGCAGACGGTCGATCTTTACCCCGGAGCCAACTATG
CTAGCACGATCCTGATGAGCACTCTCTGCACGAACAAAACCCTGTCATCC
ACCTGCTACGCTGCCGAAGCAGGCACGTTCAACCAAAACACCTCCACCAC
TGCCTACACCACCGCCAGCTCGTGGGAAACAACTTACTGGGCCGTGGAGG
GTGGAAGCCAAGAAGCTGTGCTCGGCGATGAGGTCGCCTTAGGGTCGTTT
GTCGTCCCCAATGTGAGCTTCGAAGCCATCTACCAGACCTACCAGACCTA
TCCCAATGGCATCGCCTATCCTGTCTCGGTCGGCAGTCTGGCCCTGGGGG
GTCCGTACTTGTCGGATACCGTCTCCAATTCGACGGTTCTGAACATGATC
GCAGGATGGCTTTACTCGTCCAACGACATTCCGTCCTACTCGTACGGCAT
GCATATCGGGTCGGTAGACCCCGAAATCCCAGGCTCCCTGATCTTGGGGG
GCTACGATAAGAGCCGAGTGATCGGAGACGTGAGTGCGCAGGGAGTAGTG
TCTTCGAGTGGCCTTTTGGAACTTGAATTAAAGGATATTGGGCTGGGTGT
TGCGGCGGGTTCCTCTCCCTTCAGCTTCAACAACGAAAGTGGCTTGTTTC
TCCAAGGCAGTGGTTCGGTTCAGGCCAAGACCGTCCAGATCGATCCAACC
AAGCCCTATATGTACCTTCCCCAGGCGACATGCGATGCCATCACCTCCAC
CATGCCGATCTCCTTCAATTCCAGCTTGGGGCTATACTTCTGGGACACCA
CGAGCGATGATTATCTGAATATCACGTCTTCCGCCGCATACCTCTCCTTT
GTGTTCAACATGAATGGGGTCAACAACAAGAACATTACCATCAAGATTCC
CTTTTCCCAGCTCAATCTTACGCTGCAAGAACCGCTGGTCGATCAAAACG
TCACCTACTTCCCGTGCTTCCTCACTACCTCCACCCCGGTGCTCGGTCGA
GCCTTTCTCCAGTCCGCATTCGTTGGGGTGAACTGGTTCAACGGGAACAA
CTCGGGCACATGGTTTCTGGCACAGGCCCCCGGCCCGGGTTACGCCAGTG
AAGACATCACCCGGATCGCAGTGAGTGACACGTCGCTTTCTGCCTCTAAC
GGTACCTGGGAAGAGACCTGGGCTACGTACTGGGGCATCAAAACATCCGA
CAACTCGAGCAGCTCCAAGAGTGGCCTGTCTTCCGGTGCCAAAATTGGAA
TTGGCGTCGGGGTGGGTGTCGGTGGAGCAGTGTTGATCGCAGCAGGTATA
GCCATTGCATTCTGTCTTCGCCGTCGCCGCGGGGCGAGTCAAGAGGCGGC
CGGAGAGCAACGGAGGTCGATGTTTAGGGGCTTTGCGGAGCTACCGGGAG
GTGCTCACAGTGAACCGGCGAAGGAGTTGGATACGAAGATGCATAAGCCG
CCGCAGGAAATGATGGCTTCGCAGGAGGTAGAGCGATACGAGCTGGGGTG
ATGGCTAATTCTAAATTTTAATATGCGAAGAGATCCCTACAGGATACTAC
AGGATACCATATACGTGCGAATATAATAGCTAGTTGTTCCAATATTATGT
A back to topCoding sequence (CDS) from alignment at ch2:1781125..1783225+ >KJC3_002135-T1 ID=KJC3_002135-T1|Name=KJC3_002135-T1|organism=Aspergillus niger KJC3|type=CDS|length=1632bp|location=Sequence derived from alignment at ch2:1781125..1783225+ (Aspergillus niger KJC3)
ATGATGCGACCGATACTTCTCCCCCTATTGGGGGTATTTCTGCAGACCTC
CTCGGCATCCAATCCCTATGTAATGAGCTGGTCTTCCCAAGCCTACGGTC
CAGATGGCCCGTGGCAGGCCGTATCCATCGACGTGGGCAGCAACCAGCAG
ACGGTCGATCTTTACCCCGGAGCCAACTATGCTAGCACGATCCTGATGAG
CACTCTCTGCACGAACAAAACCCTGTCATCCACCTGCTACGCTGCCGAAG
CAGGCACGTTCAACCAAAACACCTCCACCACTGCCTACACCACCGCCAGC
TCGTGGGAAACAACTTACTGGGCCGTGGAGGGTGGAAGCCAAGAAGCTGT
GCTCGGCGATGAGGTCGCCTTAGGGTCGTTTGTCGTCCCCAATGTGAGCT
TCGAAGCCATCTACCAGACCTACCAGACCTATCCCAATGGCATCGCCTAT
CCTGTCTCGGTCGGCAGTCTGGCCCTGGGGGGTCCGTACTTGTCGGATAC
CGTCTCCAATTCGACGGTTCTGAACATGATCGCAGGATGGCTTTACTCGT
CCAACGACATTCCGTCCTACTCGTACGGCATGCATATCGGGTCGGTAGAC
CCCGAAATCCCAGGCTCCCTGATCTTGGGGGGCTACGATAAGAGCCGAGT
GATCGGAGACGTGAGTGCGCAGGGAGTAGTGTCTTCGAGTGGCCTTTTGG
AACTTGAATTAAAGGATATTGGGCTGGGTGTTGCGGCGGGTTCCTCTCCC
TTCAGCTTCAACAACGAAAGTGGCTTGTTTCTCCAAGGCAGTGGTTCGGT
TCAGGCCAAGACCGTCCAGATCGATCCAACCAAGCCCTATATGTACCTTC
CCCAGGCGACATGCGATGCCATCACCTCCACCATGCCGATCTCCTTCAAT
TCCAGCTTGGGGCTATACTTCTGGGACACCACGAGCGATGATTATCTGAA
TATCACGTCTTCCGCCGCATACCTCTCCTTTGTGTTCAACATGAATGGGG
TCAACAACAAGAACATTACCATCAAGATTCCCTTTTCCCAGCTCAATCTT
ACGCTGCAAGAACCGCTGGTCGATCAAAACGTCACCTACTTCCCGTGCTT
CCTCACTACCTCCACCCCGGTGCTCGGTCGAGCCTTTCTCCAGTCCGCAT
TCGTTGGGGTGAACTGGTTCAACGGGAACAACTCGGGCACATGGTTTCTG
GCACAGGCCCCCGGCCCGGGTTACGCCAGTGAAGACATCACCCGGATCGC
AGTGAGTGACACGTCGCTTTCTGCCTCTAACGGTACCTGGGAAGAGACCT
GGGCTACGTACTGGGGCATCAAAACATCCGACAACTCGAGCAGCTCCAAG
AGTGGCCTGTCTTCCGGTGCCAAAATTGGAATTGGCGTCGGGGTGGGTGT
CGGTGGAGCAGTGTTGATCGCAGCAGGTATAGCCATTGCATTCTGTCTTC
GCCGTCGCCGCGGGGCGAGTCAAGAGGCGGCCGGAGAGCAACGGAGGTCG
ATGTTTAGGGGCTTTGCGGAGCTACCGGGAGGTGCTCACAGTGAACCGGC
GAAGGAGTTGGATACGAAGATGCATAAGCCGCCGCAGGAAATGATGGCTT
CGCAGGAGGTAGAGCGATACGAGCTGGGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002135-T1.utr5p1 | KJC3_002135-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002135-T1.utr3p1 | KJC3_002135-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR033121 |
| DBxref | InterPro:IPR021109 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1781125..1783225 + |
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