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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1787972..1791415+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002138-T1 ID=KJC3_002138-T1|Name=KJC3_002138-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3444bp|location=Sequence derived from alignment at ch2:1787972..1791415+ (Aspergillus niger KJC3)
CAAAATTCTTAGCCTTCTCGGATCCCTCAAGGAGGTGTAATCTCTCAGTG
ATCTTCTGCAGTTTCTGGTATACAGCATTCAGTTTAGCATCCCACGAGGA
TGGTTTACAGCGGGAAGCCAAGCCTGGCCTGCGAACGCTGTCGCCCGCGG
CGCTTAAAGGTACCGGCGTGTCTCTGTTTCGTGGTTTTTCTCTTTTGTCG
TCTTCGTGATCAGCCGTCATGTACATTGGCAGACGGGGGGAGGGGCAGAC
CAGATGGTTAAAGAGTTAAACTAAGCTAAACAAAACTGGAATCCGTTAGT
GCGATTGGGGGAAACCGTCATGCTCCCAGTGCATTCGGGCCAAAGTCGAC
TGTCCCGGGTATCGATCTGCTTTGGAGTATAAATTTCGTGACCAGAGTCG
TGATGTTATTCGCAAGGCACAACTTAAAGCCGAAAGGGAATCCGAAGAAA
TCAGCAAGCGACAAAAGCGGACCGTCAAGGGTAACAGCAACCAAATGCTG
ACTTACTCGTCTTCACCTTCCTCAAACCTATCATATCCAACCGCAGAACT
GGCGAAGGGATATCTCTTTGTAAATTACATCGCCAAGGGGGATCGAGGGG
CGTACATGCCGTACCTTTCAACTTTGGCAAACCATCTAGAAAGCTCCGCT
GTGAACGATGCTCTTACGGCTGCCGGGCTGGCGGCCTTGTCCAACATCTA
TAGGTCTCGACAGCTTATGTATACAGCCCGTCAACATTATATGACCGCGT
TGTCTCAGACTAGTAGCTCCCTCAGTCACGCGCATTTGTCTACGAGGGAC
GAAACCTTGGCTACAGTCGTGCTCCTGAGCATGTTTGAAGTGAGAACGAC
CTAATCAGCAACCAGGTTTTAAGCTAACACAAGTTTCCTAAGGTATTGAC
CTGCAGCGACGGTCTTTTCATCAATCGATGGATTAAGCACTTAGATGGCG
CGGCAATTTTGATTGAGACTCGGGGTCCAGAGCAACTAACTCGACCGGAA
GGATTGGCGTTATTCAGTCAATTACGCACCCAAATAGTGAGTAAACTAGT
TAGATCCTCAGCTATATCTCTTGCAGTGGGACAGATATGAAGCCCATTCA
CAGAAGACGCTAATGAGAAACTATTTAGGTGCTCAGTCATATATATCGGC
AAAAGCATACCTCGGCAATGATTCGTCGCCTCAGTCAAGAAACAGCCAAG
TACAGACCGAATAAAGATGATGCGATTGTCGATCGACTCAGCAGCGTGAC
CATTCCACTTGGGGACCTCTGTGCAGCTATCAAGGAGGGCACAATAAGCT
GCCCATCGGAGATCGTGCGTTATGCCTTGAATCTAGATGCACAAATCCAA
TCAATAATGTCCGATATACCTGCTTCAATGGGTTACAAGACTGTCAACGT
TGCCCTGGCTCAGGGAGTACCTACGGTCGACACTGTTTGGGGCGCTCAAT
ATCATACCTATAGAGACATCACCGTGAGTAGCTTCTGGAATAACTATCGA
TCTGCTAGGCTGGTACTCCTGGAGTTGATTGTCGAAGCGATCGGTGCCAT
GAACATCCACTTTCCGGGCAATACGAAAGAAGAGCATCAACATTTATTGC
GAGAATGTCAGCAAATTTCCCGCCGGCTCGTTGAGGATATTTGCGCAAGT
GTGCCATTTCATCTTGGCTCTGTGGTGGATGACAGCCACGTCGACAAATT
CTCCGGTTCCACGACTTTCAAAAGCTCAGACGCAAATAAGCATCGTGCAT
CGAAGCCTCCTCACTTGTCATCTGAATCTCCATTTGGAGCTCCAGCAGCC
GGTGGTTTTGCCTTAATGTGGCCTTTGTTGATTGCTGCAGACTCTGGTTA
TGCGCCCAGGGAACTTCGAAGTTGGATCATCCATTGTCTAGATAAGATCG
GCCATTCTATGGGTATCAACCAGGCATTAGCAATGGCACAATTGGTGAGA
GAGGGCGAGAGCACGCGGGCCTGGCTATCCCCGGAATATTCTTCGCCTAA
ACGAGACGGCCAGGAGGGGGGATCATGGAACGAAGCTGAAGCTCTATAAA
CAGATTAACCTTCAGCTTCTCTACAATGGCATGATTCACCAAAAATCAGA
GAGTATTTCGACCTTTGAAACAACATGTGCATTCAATCAAAGCATGACAT
AAGAATCAACATTAATAACTTTCAACGCCAATGATTTTGTTTTATGATTT
TTAATCACGTGGTAGACGCTATCACCGGAAGCTGGCGGCTAAACAGGCTC
ATACTGTCCATTATTATGAGCATTGCGAGGATCAAGAGGCGAAGTATGAA
ATCGCGGGTTCTTGGCTTGAGATGGCCATTTTTGAGGATTTGAGACTGTG
CTGTTCACTGCGACTTCTGACCGAGGAGTAAACACACCAAGCACAGTGTA
CATCAACACCACAAGGAATTCCTCTATGATGGCCATGCACAGCCGGATTG
TCACATTTCCATCGACCAATGAAAATCGACGGTCATGGCTAAAATCGGCG
ACAAGACTGTACAACAGACGGCAAGCGATCAATGGCAATGCTATCAGAAC
CACGCCGACGATACGCTTCTGGCTTGGCGCCATCCGAGGGAGGTCTTTGA
CGGTTGTTGACCACAGGATGCAAAGCACGATGTAGATTGCGAGGAATAGA
ATGATTCCAACACGGGTTTCGGTCTTTCCCCCGGAGTGCTCAGAGGTATC
CGATGAGTATTGGTCCAAACCGCCGATGATCGAAAGAATCAACGCTATGA
GGGCTGGGATATGGAGCAACTGAACGACTTTGCTGCGACCGGATATGGCG
GTTTCTTTCTTGTTATAAAACCCCTTTCTGGATGCAACTGTCAGCGTCTC
AGCTACCCCGATTGAGTTTCGGTACTTACAGCTTCGCTGCGACACTGCTG
AATGAACTCAGTTTCTGCAACACCATAGTGACCCGGGAGCCTTGGGTTGA
TGGCGCATGGTCGCAGATCTCATCAGAACTATCAAATGTGAGTTCTTCGA
TGGGGTTAAAGCAACAAGCACATCTGATGACTTAACGTACACTCTTTTCA
GCAGGCCAAGGCTAGATAACAACAGTGGAGAGAGCCCCACTGACTGTAAT
ATTATAGCCCACTCCAGGTCTGTCGTATTGTCTGGATGTGTCTCACTGAG
GATCTCCATCACAGCACCTGCGATTCTGACTCCGCTGAATATGAAGAGGT
AGATCCACCCGAGCTGTCTGTGAAAGCCATGGCGGAGGACGACGAAGAGA
GTAACAAGGGATATAGGTATATAGACGATCAACTCAGCAATTGCAACACC
TTGTGCTGTCACGACAGACATTTTGGGGTATCAATCTACAGGACCTGGTC
AGACGACAGAAAAAATTGCTCTCTATTCAGAGACTTGAATCATTGAAAAG
ATAGTATATCATTATCAATATGAGTTCCAGCATGGTCGCATGCG back to topCoding sequence (CDS) from alignment at ch2:1787972..1791415+ >KJC3_002138-T1 ID=KJC3_002138-T1|Name=KJC3_002138-T1|organism=Aspergillus niger KJC3|type=CDS|length=6660bp|location=Sequence derived from alignment at ch2:1787972..1791415+ (Aspergillus niger KJC3)
ATGGTTTACAGCGGGAAGCCAAGCCTGGCCTGCGAACGCTGTCGCCCGCG
GCGCTTAAAGTGCGATTGGGGGAAACCGTCATGCTCCCAGTGCATTCGGG
CCAAAGTCGACTGTCCCGGGTATCGATCTGCTTTGGAGTATAAATTTCGT
GACCAGAGTCGTGATGTTATTCGCAAGGCACAACTTAAAGCCGAAAGGGA
ATCCGAAGAAATCAGCAAGCGACAAAAGCGGACCGTCAAGGGTAACAGCA
ACCAAATGCTGACTTACTCGTCTTCACCTTCCTCAAACCTATCATATCCA
ACCGCAGAACTGGCGAAGGGATATCTCTTTGTAAATTACATCGCCAAGGG
GGATCGAGGGGCGTACATGCCGTACCTTTCAACTTTGGCAAACCATCTAG
AAAGCTCCGCTGTGAACGATGCTCTTACGGCTGCCGGGCTGGCGGCCTTG
TCCAACATCTATAGGTCTCGACAGCTTATGTATACAGCCCGTCAACATTA
TATGACCGCGTTGTCTCAGACTAGTAGCTCCCTCAGTCACGCGCATTTGT
CTACGAGGGACGAAACCTTGGCTACAGTCGTGCTCCTGAGCATGTTTGAA
GTATTGACCTGCAGCGACGGTCTTTTCATCAATCGATGGATTAAGCACTT
AGATGGCGCGGCAATTTTGATTGAGACTCGGGGTCCAGAGCAACTAACTC
GACCGGAAGGATTGGCGTTATTCAGTCAATTACGCACCCAAATAGTGCTC
AGTCATATATATCGGCAAAAGCATACCTCGGCAATGATTCGTCGCCTCAG
TCAAGAAACAGCCAAGTACAGACCGAATAAAGATGATGCGATTGTCGATC
GACTCAGCAGCGTGACCATTCCACTTGGGGACCTCTGTGCAGCTATCAAG
GAGGGCACAATAAGCTGCCCATCGGAGATCGTGCGTTATGCCTTGAATCT
AGATGCACAAATCCAATCAATAATGTCCGATATACCTGCTTCAATGGGTT
ACAAGACTGTCAACGTTGCCCTGGCTCAGGGAGTACCTACGGTCGACACT
GTTTGGGGCGCTCAATATCATACCTATAGAGACATCACCGTGAGTAGCTT
CTGGAATAACTATCGATCTGCTAGGCTGGTACTCCTGGAGTTGATTGTCG
AAGCGATCGGTGCCATGAACATCCACTTTCCGGGCAATACGAAAGAAGAG
CATCAACATTTATTGCGAGAATGTCAGCAAATTTCCCGCCGGCTCGTTGA
GGATATTTGCGCAAGTGTGCCATTTCATCTTGGCTCTGTGGTGGATGACA
GCCACGTCGACAAATTCTCCGGTTCCACGACTTTCAAAAGCTCAGACGCA
AATAAGCATCGTGCATCGAAGCCTCCTCACTTGTCATCTGAATCTCCATT
TGGAGCTCCAGCAGCCGGTGGTTTTGCCTTAATGTGGCCTTTGTTGATTG
CTGCAGACTCTGGTTATGCGCCCAGGGAACTTCGAAGTTGGATCATCCAT
TGTCTAGATAAGATCGGCCATTCTATGGGTATCAACCAGGCATTAGCAAT
GGCACAATTGGTGAGAGAGGGCGAGAGCACGCGGGCCTGGCTATCCCCGG
AATATTCTTCGCCTAAACGAGACGGCCAGGAGGGGGGATCATGGAACGAA
GCTGAAGCTCTATAAATGGTTTACAGCGGGAAGCCAAGCCTGGCCTGCGA
ACGCTGTCGCCCGCGGCGCTTAAAGTGCGATTGGGGGAAACCGTCATGCT
CCCAGTGCATTCGGGCCAAAGTCGACTGTCCCGGGTATCGATCTGCTTTG
GAGTATAAATTTCGTGACCAGAGTCGTGATGTTATTCGCAAGGCACAACT
TAAAGCCGAAAGGGAATCCGAAGAAATCAGCAAGCGACAAAAGCGGACCG
TCAAGGGTAACAGCAACCAAATGCTGACTTACTCGTCTTCACCTTCCTCA
AACCTATCATATCCAACCGCAGAACTGGCGAAGGGATATCTCTTTGTAAA
TTACATCGCCAAGGGGGATCGAGGGGCGTACATGCCGTACCTTTCAACTT
TGGCAAACCATCTAGAAAGCTCCGCTGTGAACGATGCTCTTACGGCTGCC
GGGCTGGCGGCCTTGTCCAACATCTATAGGTCTCGACAGCTTATGTATAC
AGCCCGTCAACATTATATGACCGCGTTGTCTCAGACTAGTAGCTCCCTCA
GTCACGCGCATTTGTCTACGAGGGACGAAACCTTGGCTACAGTCGTGCTC
CTGAGCATGTTTGAAGTATTGACCTGCAGCGACGGTCTTTTCATCAATCG
ATGGATTAAGCACTTAGATGGCGCGGCAATTTTGATTGAGACTCGGGGTC
CAGAGCAACTAACTCGACCGGAAGGATTGGCGTTATTCAGTCAATTACGC
ACCCAAATAGTGCTCAGTCATATATATCGGCAAAAGCATACCTCGGCAAT
GATTCGTCGCCTCAGTCAAGAAACAGCCAAGTACAGACCGAATAAAGATG
ATGCGATTGTCGATCGACTCAGCAGCGTGACCATTCCACTTGGGGACCTC
TGTGCAGCTATCAAGGAGGGCACAATAAGCTGCCCATCGGAGATCGTGCG
TTATGCCTTGAATCTAGATGCACAAATCCAATCAATAATGTCCGATATAC
CTGCTTCAATGGGTTACAAGACTGTCAACGTTGCCCTGGCTCAGGGAGTA
CCTACGGTCGACACTGTTTGGGGCGCTCAATATCATACCTATAGAGACAT
CACCGTGAGTAGCTTCTGGAATAACTATCGATCTGCTAGGCTGGTACTCC
TGGAGTTGATTGTCGAAGCGATCGGTGCCATGAACATCCACTTTCCGGGC
AATACGAAAGAAGAGCATCAACATTTATTGCGAGAATGTCAGCAAATTTC
CCGCCGGCTCGTTGAGGATATTTGCGCAAGTGTGCCATTTCATCTTGGCT
CTGTGGTGGATGACAGCCACGTCGACAAATTCTCCGGTTCCACGACTTTC
AAAAGCTCAGACGCAAATAAGCATCGTGCATCGAAGCCTCCTCACTTGTC
ATCTGAATCTCCATTTGGAGCTCCAGCAGCCGGTGGTTTTGCCTTAATGT
GGCCTTTGTTGATTGCTGCAGACTCTGGTTATGCGCCCAGGGAACTTCGA
AGTTGGATCATCCATTGTCTAGATAAGATCGGCCATTCTATGGGTATCAA
CCAGGCATTAGCAATGGCACAATTGGTGAGAGAGGGCGAGAGCACGCGGG
CCTGGCTATCCCCGGAATATTCTTCGCCTAAACGAGACGGCCAGGAGGGG
GGATCATGGAACGAAGCTGAAGCTCTATAAATGGTTTACAGCGGGAAGCC
AAGCCTGGCCTGCGAACGCTGTCGCCCGCGGCGCTTAAAGTGCGATTGGG
GGAAACCGTCATGCTCCCAGTGCATTCGGGCCAAAGTCGACTGTCCCGGG
TATCGATCTGCTTTGGAGTATAAATTTCGTGACCAGAGTCGTGATGTTAT
TCGCAAGGCACAACTTAAAGCCGAAAGGGAATCCGAAGAAATCAGCAAGC
GACAAAAGCGGACCGTCAAGGGTAACAGCAACCAAATGCTGACTTACTCG
TCTTCACCTTCCTCAAACCTATCATATCCAACCGCAGAACTGGCGAAGGG
ATATCTCTTTGTAAATTACATCGCCAAGGGGGATCGAGGGGCGTACATGC
CGTACCTTTCAACTTTGGCAAACCATCTAGAAAGCTCCGCTGTGAACGAT
GCTCTTACGGCTGCCGGGCTGGCGGCCTTGTCCAACATCTATAGGTCTCG
ACAGCTTATGTATACAGCCCGTCAACATTATATGACCGCGTTGTCTCAGA
CTAGTAGCTCCCTCAGTCACGCGCATTTGTCTACGAGGGACGAAACCTTG
GCTACAGTCGTGCTCCTGAGCATGTTTGAAGTATTGACCTGCAGCGACGG
TCTTTTCATCAATCGATGGATTAAGCACTTAGATGGCGCGGCAATTTTGA
TTGAGACTCGGGGTCCAGAGCAACTAACTCGACCGGAAGGATTGGCGTTA
TTCAGTCAATTACGCACCCAAATAGTGCTCAGTCATATATATCGGCAAAA
GCATACCTCGGCAATGATTCGTCGCCTCAGTCAAGAAACAGCCAAGTACA
GACCGAATAAAGATGATGCGATTGTCGATCGACTCAGCAGCGTGACCATT
CCACTTGGGGACCTCTGTGCAGCTATCAAGGAGGGCACAATAAGCTGCCC
ATCGGAGATCGTGCGTTATGCCTTGAATCTAGATGCACAAATCCAATCAA
TAATGTCCGATATACCTGCTTCAATGGGTTACAAGACTGTCAACGTTGCC
CTGGCTCAGGGAGTACCTACGGTCGACACTGTTTGGGGCGCTCAATATCA
TACCTATAGAGACATCACCGTGAGTAGCTTCTGGAATAACTATCGATCTG
CTAGGCTGGTACTCCTGGAGTTGATTGTCGAAGCGATCGGTGCCATGAAC
ATCCACTTTCCGGGCAATACGAAAGAAGAGCATCAACATTTATTGCGAGA
ATGTCAGCAAATTTCCCGCCGGCTCGTTGAGGATATTTGCGCAAGTGTGC
CATTTCATCTTGGCTCTGTGGTGGATGACAGCCACGTCGACAAATTCTCC
GGTTCCACGACTTTCAAAAGCTCAGACGCAAATAAGCATCGTGCATCGAA
GCCTCCTCACTTGTCATCTGAATCTCCATTTGGAGCTCCAGCAGCCGGTG
GTTTTGCCTTAATGTGGCCTTTGTTGATTGCTGCAGACTCTGGTTATGCG
CCCAGGGAACTTCGAAGTTGGATCATCCATTGTCTAGATAAGATCGGCCA
TTCTATGGGTATCAACCAGGCATTAGCAATGGCACAATTGGTGAGAGAGG
GCGAGAGCACGCGGGCCTGGCTATCCCCGGAATATTCTTCGCCTAAACGA
GACGGCCAGGAGGGGGGATCATGGAACGAAGCTGAAGCTCTATAAATGGT
TTACAGCGGGAAGCCAAGCCTGGCCTGCGAACGCTGTCGCCCGCGGCGCT
TAAAGTGCGATTGGGGGAAACCGTCATGCTCCCAGTGCATTCGGGCCAAA
GTCGACTGTCCCGGGTATCGATCTGCTTTGGAGTATAAATTTCGTGACCA
GAGTCGTGATGTTATTCGCAAGGCACAACTTAAAGCCGAAAGGGAATCCG
AAGAAATCAGCAAGCGACAAAAGCGGACCGTCAAGGGTAACAGCAACCAA
ATGCTGACTTACTCGTCTTCACCTTCCTCAAACCTATCATATCCAACCGC
AGAACTGGCGAAGGGATATCTCTTTGTAAATTACATCGCCAAGGGGGATC
GAGGGGCGTACATGCCGTACCTTTCAACTTTGGCAAACCATCTAGAAAGC
TCCGCTGTGAACGATGCTCTTACGGCTGCCGGGCTGGCGGCCTTGTCCAA
CATCTATAGGTCTCGACAGCTTATGTATACAGCCCGTCAACATTATATGA
CCGCGTTGTCTCAGACTAGTAGCTCCCTCAGTCACGCGCATTTGTCTACG
AGGGACGAAACCTTGGCTACAGTCGTGCTCCTGAGCATGTTTGAAGTATT
GACCTGCAGCGACGGTCTTTTCATCAATCGATGGATTAAGCACTTAGATG
GCGCGGCAATTTTGATTGAGACTCGGGGTCCAGAGCAACTAACTCGACCG
GAAGGATTGGCGTTATTCAGTCAATTACGCACCCAAATAGTGCTCAGTCA
TATATATCGGCAAAAGCATACCTCGGCAATGATTCGTCGCCTCAGTCAAG
AAACAGCCAAGTACAGACCGAATAAAGATGATGCGATTGTCGATCGACTC
AGCAGCGTGACCATTCCACTTGGGGACCTCTGTGCAGCTATCAAGGAGGG
CACAATAAGCTGCCCATCGGAGATCGTGCGTTATGCCTTGAATCTAGATG
CACAAATCCAATCAATAATGTCCGATATACCTGCTTCAATGGGTTACAAG
ACTGTCAACGTTGCCCTGGCTCAGGGAGTACCTACGGTCGACACTGTTTG
GGGCGCTCAATATCATACCTATAGAGACATCACCGTGAGTAGCTTCTGGA
ATAACTATCGATCTGCTAGGCTGGTACTCCTGGAGTTGATTGTCGAAGCG
ATCGGTGCCATGAACATCCACTTTCCGGGCAATACGAAAGAAGAGCATCA
ACATTTATTGCGAGAATGTCAGCAAATTTCCCGCCGGCTCGTTGAGGATA
TTTGCGCAAGTGTGCCATTTCATCTTGGCTCTGTGGTGGATGACAGCCAC
GTCGACAAATTCTCCGGTTCCACGACTTTCAAAAGCTCAGACGCAAATAA
GCATCGTGCATCGAAGCCTCCTCACTTGTCATCTGAATCTCCATTTGGAG
CTCCAGCAGCCGGTGGTTTTGCCTTAATGTGGCCTTTGTTGATTGCTGCA
GACTCTGGTTATGCGCCCAGGGAACTTCGAAGTTGGATCATCCATTGTCT
AGATAAGATCGGCCATTCTATGGGTATCAACCAGGCATTAGCAATGGCAC
AATTGGTGAGAGAGGGCGAGAGCACGCGGGCCTGGCTATCCCCGGAATAT
TCTTCGCCTAAACGAGACGGCCAGGAGGGGGGATCATGGAACGAAGCTGA
AGCTCTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002138-T1.utr5p1 | KJC3_002138-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1787972..1791415 + |
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