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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1796697..1798433+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002142-T1 ID=KJC3_002142-T1|Name=KJC3_002142-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1737bp|location=Sequence derived from alignment at ch2:1796697..1798433+ (Aspergillus niger KJC3)
GAGCAAGACCCTGCGTCGATATTGACGGTCAATACACTGACCTCAGAGAA
CCGTCGATGTGCCTGATTTCGCTCCATCAAAATGACGTCTTCTACCTTGC
GCCTTGCCGTCGCGTTGGCTTTGTCAACTTGCAGCAGTGCCCTATCGAGC
CAGCGAGATGATTCACTTGTGGTTCCATTTCCTTTTGGCAATCTTGAGGA
TGTCCATATTGCCAAGCGGGATAGCTCCAAGACAGTAGAAGCTCCTCTAG
TGATATATGTCAGTCAGCTCTCCCACTCTCCATCTATGTCATCAACTCGA
CAACCCTAACAATCAACAGGGCGACAGCTACTGGATGAACGCCTCAATTG
GAACCCCTGCGCAGTCACTAAGTTTCCTACTAGATCTTACGCGCTCAAGG
GTCGAGCCCGCATACACCCTCGATGAGAATTACGAATGTTCTGACGATGA
ACTCTGCTCCGAATTCGGCTTCTACAAACCCACCGATTCATCCACTTATC
AGCATCTCACCTACACACAGAGACACGATGCAGGTGTCGACTACTCCTAC
CTTGATACCATAACTCTTGGAGATCACGCAACCGACAATGTCCCACTGGA
CATGTATCTTTTGTCCTACATTTCCTGTCAGTTCCCCCTCTCTCCCTTAC
CACCCTATTTATCCATCATCTGACCATTGTCTAACCACCACATAGACAGC
TCCCTCGGTCTCTCCTCCGTCAACACCAGCTTCCCCTACATCCTGGTCGA
TCGCGGCCTCACCACCTCCCCATCCTTCAGCCTAATCGGCGACAACGGAA
ACACCACCACCCCCAGCATCATCTTTGGAGGCATCAACACCTCCAAATTC
AACGGGCCCCTGCAAGCCTTCTCCTTCGCAGACCACAGCATCACCAACAA
TCCATTCGTCACCGTCGAAGCTGACTCCCTCCAACTAACCACCAACACCA
ACGATAATTCCACCTACCCTATTCCCTCCTCCACCCCCATGATGCTCAGA
ACCGAAGAACTAATCACCTACCTCCCCAACTCGACCGTCCAATCCCTCTA
CACCGACCTTAACATAACCATGGACGGCGTGATCTCCACTTCAAGATTCT
ACGGGGTCCTTCCCTGCGCCCGCCAGGAAACCGAATCTCACACAATCTCT
CTAGCCATCGGCAACATGACCTTCTCTGTGTCCTGGGATGAGCTCTTCGT
CCCGTGGACGCGTGACGGACTATGCAAGTTCGGCATTCAGGCCCAGGATT
CAGATTACAAATCTCGTGCGGAGCTGGGTGTTCCCTTTCTGAGACGGATG
TATGTCGCTGTGGATTATAATAATCAGTTTGTGGGCGTTGCGACGCTGAA
GGATGATGATGATCAAAATGAAGGTGAAGATGAGATTGTGGAAATTGGCA
CTGGGACAGCGTTGCCTCGTGCTGTCGGGGATTGGCCGGCTAGTGTTACG
GCGTATACGCCTGCTGCTTCTACAGGGACGGCGGCTGCGACGTTGACATT
CACGACGGCGACGTCTAGCGGGGGAGGTGTGGTGCCGACAGGTCTATCAG
AGATGGGTAGGGCGTTGTTGGTGCCGGGGGTGCTGGGGATGGCTGTTTTG
CAGGCTGTTTAGGTTAGAGATTGTGGTACGATTATTCTGTAGGTTAAAGA
TGTATATTGTCTGTTATTGTACTTGATAGCTTGATATGTATAATGAAAGT
AGTATAGTTTGAATTTTTGTTATACACCACGTGAACC back to topCoding sequence (CDS) from alignment at ch2:1796697..1798433+ >KJC3_002142-T1 ID=KJC3_002142-T1|Name=KJC3_002142-T1|organism=Aspergillus niger KJC3|type=CDS|length=4203bp|location=Sequence derived from alignment at ch2:1796697..1798433+ (Aspergillus niger KJC3)
ATGACGTCTTCTACCTTGCGCCTTGCCGTCGCGTTGGCTTTGTCAACTTG
CAGCAGTGCCCTATCGAGCCAGCGAGATGATTCACTTGTGGTTCCATTTC
CTTTTGGCAATCTTGAGGATGTCCATATTGCCAAGCGGGATAGCTCCAAG
ACAGTAGAAGCTCCTCTAGTGATATATGGCGACAGCTACTGGATGAACGC
CTCAATTGGAACCCCTGCGCAGTCACTAAGTTTCCTACTAGATCTTACGC
GCTCAAGGGTCGAGCCCGCATACACCCTCGATGAGAATTACGAATGTTCT
GACGATGAACTCTGCTCCGAATTCGGCTTCTACAAACCCACCGATTCATC
CACTTATCAGCATCTCACCTACACACAGAGACACGATGCAGGTGTCGACT
ACTCCTACCTTGATACCATAACTCTTGGAGATCACGCAACCGACAATGTC
CCACTGGACATGTATCTTTTGTCCTACATTTCCTACAGCTCCCTCGGTCT
CTCCTCCGTCAACACCAGCTTCCCCTACATCCTGGTCGATCGCGGCCTCA
CCACCTCCCCATCCTTCAGCCTAATCGGCGACAACGGAAACACCACCACC
CCCAGCATCATCTTTGGAGGCATCAACACCTCCAAATTCAACGGGCCCCT
GCAAGCCTTCTCCTTCGCAGACCACAGCATCACCAACAATCCATTCGTCA
CCGTCGAAGCTGACTCCCTCCAACTAACCACCAACACCAACGATAATTCC
ACCTACCCTATTCCCTCCTCCACCCCCATGATGCTCAGAACCGAAGAACT
AATCACCTACCTCCCCAACTCGACCGTCCAATCCCTCTACACCGACCTTA
ACATAACCATGGACGGCGTGATCTCCACTTCAAGATTCTACGGGGTCCTT
CCCTGCGCCCGCCAGGAAACCGAATCTCACACAATCTCTCTAGCCATCGG
CAACATGACCTTCTCTGTGTCCTGGGATGAGCTCTTCGTCCCGTGGACGC
GTGACGGACTATGCAAGTTCGGCATTCAGGCCCAGGATTCAGATTACAAA
TCTCGTGCGGAGCTGGGTGTTCCCTTTCTGAGACGGATGTATGTCGCTGT
GGATTATAATAATCAGTTTGTGGGCGTTGCGACGCTGAAGGATGATGATG
ATCAAAATGAAGGTGAAGATGAGATTGTGGAAATTGGCACTGGGACAGCG
TTGCCTCGTGCTGTCGGGGATTGGCCGGCTAGTGTTACGGCGTATACGCC
TGCTGCTTCTACAGGGACGGCGGCTGCGACGTTGACATTCACGACGGCGA
CGTCTAGCGGGGGAGGTGTGGTGCCGACAGGTCTATCAGAGATGGGTAGG
GCGTTGTTGGTGCCGGGGGTGCTGGGGATGGCTGTTTTGCAGGCTGTTTA
GATGACGTCTTCTACCTTGCGCCTTGCCGTCGCGTTGGCTTTGTCAACTT
GCAGCAGTGCCCTATCGAGCCAGCGAGATGATTCACTTGTGGTTCCATTT
CCTTTTGGCAATCTTGAGGATGTCCATATTGCCAAGCGGGATAGCTCCAA
GACAGTAGAAGCTCCTCTAGTGATATATGGCGACAGCTACTGGATGAACG
CCTCAATTGGAACCCCTGCGCAGTCACTAAGTTTCCTACTAGATCTTACG
CGCTCAAGGGTCGAGCCCGCATACACCCTCGATGAGAATTACGAATGTTC
TGACGATGAACTCTGCTCCGAATTCGGCTTCTACAAACCCACCGATTCAT
CCACTTATCAGCATCTCACCTACACACAGAGACACGATGCAGGTGTCGAC
TACTCCTACCTTGATACCATAACTCTTGGAGATCACGCAACCGACAATGT
CCCACTGGACATGTATCTTTTGTCCTACATTTCCTACAGCTCCCTCGGTC
TCTCCTCCGTCAACACCAGCTTCCCCTACATCCTGGTCGATCGCGGCCTC
ACCACCTCCCCATCCTTCAGCCTAATCGGCGACAACGGAAACACCACCAC
CCCCAGCATCATCTTTGGAGGCATCAACACCTCCAAATTCAACGGGCCCC
TGCAAGCCTTCTCCTTCGCAGACCACAGCATCACCAACAATCCATTCGTC
ACCGTCGAAGCTGACTCCCTCCAACTAACCACCAACACCAACGATAATTC
CACCTACCCTATTCCCTCCTCCACCCCCATGATGCTCAGAACCGAAGAAC
TAATCACCTACCTCCCCAACTCGACCGTCCAATCCCTCTACACCGACCTT
AACATAACCATGGACGGCGTGATCTCCACTTCAAGATTCTACGGGGTCCT
TCCCTGCGCCCGCCAGGAAACCGAATCTCACACAATCTCTCTAGCCATCG
GCAACATGACCTTCTCTGTGTCCTGGGATGAGCTCTTCGTCCCGTGGACG
CGTGACGGACTATGCAAGTTCGGCATTCAGGCCCAGGATTCAGATTACAA
ATCTCGTGCGGAGCTGGGTGTTCCCTTTCTGAGACGGATGTATGTCGCTG
TGGATTATAATAATCAGTTTGTGGGCGTTGCGACGCTGAAGGATGATGAT
GATCAAAATGAAGGTGAAGATGAGATTGTGGAAATTGGCACTGGGACAGC
GTTGCCTCGTGCTGTCGGGGATTGGCCGGCTAGTGTTACGGCGTATACGC
CTGCTGCTTCTACAGGGACGGCGGCTGCGACGTTGACATTCACGACGGCG
ACGTCTAGCGGGGGAGGTGTGGTGCCGACAGGTCTATCAGAGATGGGTAG
GGCGTTGTTGGTGCCGGGGGTGCTGGGGATGGCTGTTTTGCAGGCTGTTT
AGATGACGTCTTCTACCTTGCGCCTTGCCGTCGCGTTGGCTTTGTCAACT
TGCAGCAGTGCCCTATCGAGCCAGCGAGATGATTCACTTGTGGTTCCATT
TCCTTTTGGCAATCTTGAGGATGTCCATATTGCCAAGCGGGATAGCTCCA
AGACAGTAGAAGCTCCTCTAGTGATATATGGCGACAGCTACTGGATGAAC
GCCTCAATTGGAACCCCTGCGCAGTCACTAAGTTTCCTACTAGATCTTAC
GCGCTCAAGGGTCGAGCCCGCATACACCCTCGATGAGAATTACGAATGTT
CTGACGATGAACTCTGCTCCGAATTCGGCTTCTACAAACCCACCGATTCA
TCCACTTATCAGCATCTCACCTACACACAGAGACACGATGCAGGTGTCGA
CTACTCCTACCTTGATACCATAACTCTTGGAGATCACGCAACCGACAATG
TCCCACTGGACATGTATCTTTTGTCCTACATTTCCTACAGCTCCCTCGGT
CTCTCCTCCGTCAACACCAGCTTCCCCTACATCCTGGTCGATCGCGGCCT
CACCACCTCCCCATCCTTCAGCCTAATCGGCGACAACGGAAACACCACCA
CCCCCAGCATCATCTTTGGAGGCATCAACACCTCCAAATTCAACGGGCCC
CTGCAAGCCTTCTCCTTCGCAGACCACAGCATCACCAACAATCCATTCGT
CACCGTCGAAGCTGACTCCCTCCAACTAACCACCAACACCAACGATAATT
CCACCTACCCTATTCCCTCCTCCACCCCCATGATGCTCAGAACCGAAGAA
CTAATCACCTACCTCCCCAACTCGACCGTCCAATCCCTCTACACCGACCT
TAACATAACCATGGACGGCGTGATCTCCACTTCAAGATTCTACGGGGTCC
TTCCCTGCGCCCGCCAGGAAACCGAATCTCACACAATCTCTCTAGCCATC
GGCAACATGACCTTCTCTGTGTCCTGGGATGAGCTCTTCGTCCCGTGGAC
GCGTGACGGACTATGCAAGTTCGGCATTCAGGCCCAGGATTCAGATTACA
AATCTCGTGCGGAGCTGGGTGTTCCCTTTCTGAGACGGATGTATGTCGCT
GTGGATTATAATAATCAGTTTGTGGGCGTTGCGACGCTGAAGGATGATGA
TGATCAAAATGAAGGTGAAGATGAGATTGTGGAAATTGGCACTGGGACAG
CGTTGCCTCGTGCTGTCGGGGATTGGCCGGCTAGTGTTACGGCGTATACG
CCTGCTGCTTCTACAGGGACGGCGGCTGCGACGTTGACATTCACGACGGC
GACGTCTAGCGGGGGAGGTGTGGTGCCGACAGGTCTATCAGAGATGGGTA
GGGCGTTGTTGGTGCCGGGGGTGCTGGGGATGGCTGTTTTGCAGGCTGTT
TAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002142-T1.utr5p1 | KJC3_002142-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002142-T1.utr3p1 | KJC3_002142-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | MEROPS:MER0005350 |
| DBxref | InterPro:IPR033121 |
| DBxref | InterPro:IPR021109 |
| DBxref | PFAM:PF00026 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1796697..1798433 + |
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