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KJC3_002148-T1, KJC3_002148-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002148-T1
Unique NameKJC3_002148-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1809362..1810143+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002148-T1 ID=KJC3_002148-T1|Name=KJC3_002148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=782bp|location=Sequence derived from alignment at ch2:1809362..1810143+ (Aspergillus niger KJC3)
ATGGCTGTCAGGAACTCCAGTGCGTCGTCCTGTTCTGTCGATTTTTCTCG
AAGTCGCCAATCCAATCCATACTAATTTGACTTCGTGATGATTTCAGGTC
TCGCCTCTTCTCGCCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCC
AGCGAGCGCCGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGC
CAAGTACAATGTACGTTCGATCAGACCGATGTGATTCTTGTTTTTGCAGC
CCCTGGGATGTGTGTGTGTTTGGATATGGATTTGGCATGGTTTCTTTCTT
TCCGGTCGGGGACAGGCTGGATCAGGCCAGCGAGATTGGGATTTGGGAGG
AAGATACAAGAACCAGATCCAATCGACAAACATCCAATCCGAGATATCAG
GCACAACGAAACAATGCTGGGAGAAATGGTTCTAACGCAGTCGTTTTGAT
AGGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTGAGCCAAGGCTGA
TTCTAACCCGACATCTAACCCACTCGCTAAACTGTGAACAAGGTCATGGT
CGTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACC
GCCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAAC
GGCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAAGGTCGTCATCAAGAA
GCTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGG
GTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAA
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Coding sequence (CDS) from alignment at ch2:1809362..1810143+

>KJC3_002148-T1 ID=KJC3_002148-T1|Name=KJC3_002148-T1|organism=Aspergillus niger KJC3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch2:1809362..1810143+ (Aspergillus niger KJC3)
ATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCGCGCGC
CGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTCTGCTC
CTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGCCCATC
CGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGA
GGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGC
GCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCAC
CCCTCCAAGGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGC
CATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCG
CTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCAAGTCG
CGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTC
TGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTCCATGC
CCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACAAGGGC
CGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGT
CGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCC
TCCACCCCTCCAAGGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGT
GAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAA
GTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCGCCGCA
AGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATC
CTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTCCGCTC
CATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAGCAACA
AGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATC
CACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCAT
CCCCCTCCACCCCTCCAAGGTCGTCATCAAGAAGCTCCACCTCGACAAGG
ACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAG
GCCAAGTCCGCTTAAATGGCTGTCAGGAACTCCAGTCTCGCCTCTTCTCG
CCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCG
TTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATGTC
CGCTCCATGCCCATCCGCAAGGACGACGAGGTCATGGTCGTCCGTGGCAG
CAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGG
CCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTC
CCCATCCCCCTCCACCCCTCCAAGGTCGTCATCAAGAAGCTCCACCTCGA
CAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCG
TCAAGGCCAAGTCCGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL26AKJC3_002148Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002148-T1.exon1KJC3_002148-T1.exon1Aspergillus niger KJC3exon
KJC3_002148-T1.exon2KJC3_002148-T1.exon2Aspergillus niger KJC3exon
KJC3_002148-T1.exon3KJC3_002148-T1.exon3Aspergillus niger KJC3exon
KJC3_002148-T1.exon4KJC3_002148-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002148-T1.cdsKJC3_002148-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002148-T1KJC3_002148-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265DAV
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041988
DBxrefInterPro:IPR005825
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR005756
DBxrefInterPro:IPR005824
DBxrefPFAM:PF16906
DBxrefPFAM:PF00467
Product60S ribosomal protein L26A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1809362..1810143 +
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