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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1820364..1822239+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002154-T1 ID=KJC3_002154-T1|Name=KJC3_002154-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1876bp|location=Sequence derived from alignment at ch2:1820364..1822239+ (Aspergillus niger KJC3)
TATAGTTCTTCTTATCTTTGCCTGTTCCTGTGTGATAGTATCATTCAATG
ACATCACACTATGTATCCCCACGAACAGCAACCCCAGTCCCAGTCATCTC
GAAGTTCCTTTTCCGATAAGGGGATAGACAGCCAGGATAGCGGGGATGAT
ATGGTCCCCGCATTTGGGCTCACTGGAGCCGAGAGCAAGGCGGGATCCAT
ACGCTCAGACGGTAAACGCGAGTTGAAGGAGAACGACTGCTACGATAAGC
TGGCCTACTGCTGGCCGAGATGGAAGAAATGGTCGTATCTTGCGGCCATA
GCGTGCGTTCAAGTATCCATGAACTTTAACACCTCTGTTTTTCCCAATGC
CGTGAAGCCGTTGTCAGAGGCATTTAATATCGGGGAGCAGGAGGCCCGAA
CGGGGCAGATGATTTACCTCATCACCTATTCCATTGGGTGTGAGTTATGG
GCGCCTTGGAGTGAAGAATTTGGTCGCTGGCCTATCCTCCAGTTATCCAT
GTTCCTTATCAATATATGGCAAATTCCAGCTGCCTTGGCGCCAAATTGGG
GCACCATTGTTGTTGCTCGTGGATTGGTCAGTTCCCTGCGCCTGGAATGT
GCACTATGTCATGCTAACATAGTCTGTAGGGTGGAATCTCGACCGCTGGC
GGTAGTGTCACCCTGGGTCTTATTGCAGATCTCTACGAAGCCGAAGACCA
ACAGTTTCCTTTGGCATTTATTGTCTTATCATCTTGCATCGGCACAAGTA
TTGGAGGAGTGATAGGTGGACCAATCGAGCGCTGTACGTACCTTCTTCTT
CCCAAAGATTCACCATTAATAATTCGCAAACCACTAACTATGCATCCAAC
AGACCTCGACTGGCAATGGTTCTTCTGGATCATGCTCATCTTCGGCTTCA
CTGTCGAGGTAATCCTTCTCTTCGTTCCCGAAAGCCGCTCGACAATCATC
ATGGACCGCGAAGCCAAGCGCCGCCGCGAATCCGGCGAAGACCCCAACAT
CTACGGACCCAACGAGCTCAAAAATCCTCGCATTTCCCTCAAAGAAGCCG
GAAAGATCTGGATCCGTCCCTTCTACATGTTCCTCCGCGAACCCATCGTC
CTATGCCTCTCCCTCCTTTCCGGATTCTCCGACTCCCTCATCTTCACCTT
CCTGGAGAGTTTCTCCATCGTGTACGAGAAAGGTTGGGGCTTCGGTATTC
TCGGCCAAGCGTGGGCCGTTATTCCGATCAACATCGGCTATGTGATCGCC
TATTTCTCATACTTCCCTTGGTTCTGGCGGGACCAGAAAATCCGCGACGC
GAAGGGTGATGATGCACTACCTGCTGAACGGAGACTCAAGTGGCTTCTTT
ATCTAGCCTTGCTTGAACCGATAGGGCTGTTCGGCTTCGCGTGGACATCG
CTAGGCCAAGAGTATGGTGTGCCGTGGATCGCATCCATGATCTTCTCTAC
CCTTGTCGGCATCGCCAACTACGCTATCTATCTTTCCTCGGTTGATTACA
TGGTCGCTGCGTACGGTGTATACTCTGCTTCTGCGACGGGCGGAAATGCG
TTCTGTCGTGATCTGCTGGCGGGTATTGCGGCTATGTATACCACCCCGAT
GTATGAGAATATCGGAGATAAGTGGCACGTTGAGTATGCCACCACTATCC
TCGCTTGCCTTTCTTGCTTGGTGGTGCTGCCGATTTACATCTTCTACTGG
AAGGGGCCGCAGATTCGCGAGCGGAGCAAGTTTGCCCAGACGCTGGCGTC
GGATCGGAAGGCTAACCAGGGTCATCGGGTTAGTAAGGAGGATGCTGCAC
CCTGAGGAGAAGATAGGATTTGCAGTTAGGTTTGATGTCTGAGGCTGGAT
GCCCTGACTTGTACATTATGCTGGCG back to topCoding sequence (CDS) from alignment at ch2:1820364..1822239+ >KJC3_002154-T1 ID=KJC3_002154-T1|Name=KJC3_002154-T1|organism=Aspergillus niger KJC3|type=CDS|length=4869bp|location=Sequence derived from alignment at ch2:1820364..1822239+ (Aspergillus niger KJC3)
ATGTATCCCCACGAACAGCAACCCCAGTCCCAGTCATCTCGAAGTTCCTT
TTCCGATAAGGGGATAGACAGCCAGGATAGCGGGGATGATATGGTCCCCG
CATTTGGGCTCACTGGAGCCGAGAGCAAGGCGGGATCCATACGCTCAGAC
GGTAAACGCGAGTTGAAGGAGAACGACTGCTACGATAAGCTGGCCTACTG
CTGGCCGAGATGGAAGAAATGGTCGTATCTTGCGGCCATAGCGTGCGTTC
AAGTATCCATGAACTTTAACACCTCTGTTTTTCCCAATGCCGTGAAGCCG
TTGTCAGAGGCATTTAATATCGGGGAGCAGGAGGCCCGAACGGGGCAGAT
GATTTACCTCATCACCTATTCCATTGGGTGTGAGTTATGGGCGCCTTGGA
GTGAAGAATTTGGTCGCTGGCCTATCCTCCAGTTATCCATGTTCCTTATC
AATATATGGCAAATTCCAGCTGCCTTGGCGCCAAATTGGGGCACCATTGT
TGTTGCTCGTGGATTGGGTGGAATCTCGACCGCTGGCGGTAGTGTCACCC
TGGGTCTTATTGCAGATCTCTACGAAGCCGAAGACCAACAGTTTCCTTTG
GCATTTATTGTCTTATCATCTTGCATCGGCACAAGTATTGGAGGAGTGAT
AGGTGGACCAATCGAGCGCTACCTCGACTGGCAATGGTTCTTCTGGATCA
TGCTCATCTTCGGCTTCACTGTCGAGGTAATCCTTCTCTTCGTTCCCGAA
AGCCGCTCGACAATCATCATGGACCGCGAAGCCAAGCGCCGCCGCGAATC
CGGCGAAGACCCCAACATCTACGGACCCAACGAGCTCAAAAATCCTCGCA
TTTCCCTCAAAGAAGCCGGAAAGATCTGGATCCGTCCCTTCTACATGTTC
CTCCGCGAACCCATCGTCCTATGCCTCTCCCTCCTTTCCGGATTCTCCGA
CTCCCTCATCTTCACCTTCCTGGAGAGTTTCTCCATCGTGTACGAGAAAG
GTTGGGGCTTCGGTATTCTCGGCCAAGCGTGGGCCGTTATTCCGATCAAC
ATCGGCTATGTGATCGCCTATTTCTCATACTTCCCTTGGTTCTGGCGGGA
CCAGAAAATCCGCGACGCGAAGGGTGATGATGCACTACCTGCTGAACGGA
GACTCAAGTGGCTTCTTTATCTAGCCTTGCTTGAACCGATAGGGCTGTTC
GGCTTCGCGTGGACATCGCTAGGCCAAGAGTATGGTGTGCCGTGGATCGC
ATCCATGATCTTCTCTACCCTTGTCGGCATCGCCAACTACGCTATCTATC
TTTCCTCGGTTGATTACATGGTCGCTGCGTACGGTGTATACTCTGCTTCT
GCGACGGGCGGAAATGCGTTCTGTCGTGATCTGCTGGCGGGTATTGCGGC
TATGTATACCACCCCGATGTATGAGAATATCGGAGATAAGTGGCACGTTG
AGTATGCCACCACTATCCTCGCTTGCCTTTCTTGCTTGGTGGTGCTGCCG
ATTTACATCTTCTACTGGAAGGGGCCGCAGATTCGCGAGCGGAGCAAGTT
TGCCCAGACGCTGGCGTCGGATCGGAAGGCTAACCAGGGTCATCGGGTTA
GTAAGGAGGATGCTGCACCCTGAATGTATCCCCACGAACAGCAACCCCAG
TCCCAGTCATCTCGAAGTTCCTTTTCCGATAAGGGGATAGACAGCCAGGA
TAGCGGGGATGATATGGTCCCCGCATTTGGGCTCACTGGAGCCGAGAGCA
AGGCGGGATCCATACGCTCAGACGGTAAACGCGAGTTGAAGGAGAACGAC
TGCTACGATAAGCTGGCCTACTGCTGGCCGAGATGGAAGAAATGGTCGTA
TCTTGCGGCCATAGCGTGCGTTCAAGTATCCATGAACTTTAACACCTCTG
TTTTTCCCAATGCCGTGAAGCCGTTGTCAGAGGCATTTAATATCGGGGAG
CAGGAGGCCCGAACGGGGCAGATGATTTACCTCATCACCTATTCCATTGG
GTGTGAGTTATGGGCGCCTTGGAGTGAAGAATTTGGTCGCTGGCCTATCC
TCCAGTTATCCATGTTCCTTATCAATATATGGCAAATTCCAGCTGCCTTG
GCGCCAAATTGGGGCACCATTGTTGTTGCTCGTGGATTGGGTGGAATCTC
GACCGCTGGCGGTAGTGTCACCCTGGGTCTTATTGCAGATCTCTACGAAG
CCGAAGACCAACAGTTTCCTTTGGCATTTATTGTCTTATCATCTTGCATC
GGCACAAGTATTGGAGGAGTGATAGGTGGACCAATCGAGCGCTACCTCGA
CTGGCAATGGTTCTTCTGGATCATGCTCATCTTCGGCTTCACTGTCGAGG
TAATCCTTCTCTTCGTTCCCGAAAGCCGCTCGACAATCATCATGGACCGC
GAAGCCAAGCGCCGCCGCGAATCCGGCGAAGACCCCAACATCTACGGACC
CAACGAGCTCAAAAATCCTCGCATTTCCCTCAAAGAAGCCGGAAAGATCT
GGATCCGTCCCTTCTACATGTTCCTCCGCGAACCCATCGTCCTATGCCTC
TCCCTCCTTTCCGGATTCTCCGACTCCCTCATCTTCACCTTCCTGGAGAG
TTTCTCCATCGTGTACGAGAAAGGTTGGGGCTTCGGTATTCTCGGCCAAG
CGTGGGCCGTTATTCCGATCAACATCGGCTATGTGATCGCCTATTTCTCA
TACTTCCCTTGGTTCTGGCGGGACCAGAAAATCCGCGACGCGAAGGGTGA
TGATGCACTACCTGCTGAACGGAGACTCAAGTGGCTTCTTTATCTAGCCT
TGCTTGAACCGATAGGGCTGTTCGGCTTCGCGTGGACATCGCTAGGCCAA
GAGTATGGTGTGCCGTGGATCGCATCCATGATCTTCTCTACCCTTGTCGG
CATCGCCAACTACGCTATCTATCTTTCCTCGGTTGATTACATGGTCGCTG
CGTACGGTGTATACTCTGCTTCTGCGACGGGCGGAAATGCGTTCTGTCGT
GATCTGCTGGCGGGTATTGCGGCTATGTATACCACCCCGATGTATGAGAA
TATCGGAGATAAGTGGCACGTTGAGTATGCCACCACTATCCTCGCTTGCC
TTTCTTGCTTGGTGGTGCTGCCGATTTACATCTTCTACTGGAAGGGGCCG
CAGATTCGCGAGCGGAGCAAGTTTGCCCAGACGCTGGCGTCGGATCGGAA
GGCTAACCAGGGTCATCGGGTTAGTAAGGAGGATGCTGCACCCTGAATGT
ATCCCCACGAACAGCAACCCCAGTCCCAGTCATCTCGAAGTTCCTTTTCC
GATAAGGGGATAGACAGCCAGGATAGCGGGGATGATATGGTCCCCGCATT
TGGGCTCACTGGAGCCGAGAGCAAGGCGGGATCCATACGCTCAGACGGTA
AACGCGAGTTGAAGGAGAACGACTGCTACGATAAGCTGGCCTACTGCTGG
CCGAGATGGAAGAAATGGTCGTATCTTGCGGCCATAGCGTGCGTTCAAGT
ATCCATGAACTTTAACACCTCTGTTTTTCCCAATGCCGTGAAGCCGTTGT
CAGAGGCATTTAATATCGGGGAGCAGGAGGCCCGAACGGGGCAGATGATT
TACCTCATCACCTATTCCATTGGGTGTGAGTTATGGGCGCCTTGGAGTGA
AGAATTTGGTCGCTGGCCTATCCTCCAGTTATCCATGTTCCTTATCAATA
TATGGCAAATTCCAGCTGCCTTGGCGCCAAATTGGGGCACCATTGTTGTT
GCTCGTGGATTGGGTGGAATCTCGACCGCTGGCGGTAGTGTCACCCTGGG
TCTTATTGCAGATCTCTACGAAGCCGAAGACCAACAGTTTCCTTTGGCAT
TTATTGTCTTATCATCTTGCATCGGCACAAGTATTGGAGGAGTGATAGGT
GGACCAATCGAGCGCTACCTCGACTGGCAATGGTTCTTCTGGATCATGCT
CATCTTCGGCTTCACTGTCGAGGTAATCCTTCTCTTCGTTCCCGAAAGCC
GCTCGACAATCATCATGGACCGCGAAGCCAAGCGCCGCCGCGAATCCGGC
GAAGACCCCAACATCTACGGACCCAACGAGCTCAAAAATCCTCGCATTTC
CCTCAAAGAAGCCGGAAAGATCTGGATCCGTCCCTTCTACATGTTCCTCC
GCGAACCCATCGTCCTATGCCTCTCCCTCCTTTCCGGATTCTCCGACTCC
CTCATCTTCACCTTCCTGGAGAGTTTCTCCATCGTGTACGAGAAAGGTTG
GGGCTTCGGTATTCTCGGCCAAGCGTGGGCCGTTATTCCGATCAACATCG
GCTATGTGATCGCCTATTTCTCATACTTCCCTTGGTTCTGGCGGGACCAG
AAAATCCGCGACGCGAAGGGTGATGATGCACTACCTGCTGAACGGAGACT
CAAGTGGCTTCTTTATCTAGCCTTGCTTGAACCGATAGGGCTGTTCGGCT
TCGCGTGGACATCGCTAGGCCAAGAGTATGGTGTGCCGTGGATCGCATCC
ATGATCTTCTCTACCCTTGTCGGCATCGCCAACTACGCTATCTATCTTTC
CTCGGTTGATTACATGGTCGCTGCGTACGGTGTATACTCTGCTTCTGCGA
CGGGCGGAAATGCGTTCTGTCGTGATCTGCTGGCGGGTATTGCGGCTATG
TATACCACCCCGATGTATGAGAATATCGGAGATAAGTGGCACGTTGAGTA
TGCCACCACTATCCTCGCTTGCCTTTCTTGCTTGGTGGTGCTGCCGATTT
ACATCTTCTACTGGAAGGGGCCGCAGATTCGCGAGCGGAGCAAGTTTGCC
CAGACGCTGGCGTCGGATCGGAAGGCTAACCAGGGTCATCGGGTTAGTAA
GGAGGATGCTGCACCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002154-T1.utr5p1 | KJC3_002154-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002154-T1.utr3p1 | KJC3_002154-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1820364..1822239 + |
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