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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1856706..1857961- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002168-T1 ID=KJC3_002168-T1|Name=KJC3_002168-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1256bp|location=Sequence derived from alignment at ch2:1856706..1857961- (Aspergillus niger KJC3)
ATGACTATTCATTTCACCGTCGCAGCACTAGCTGCCATTATGATTCAATC
GGTTACAGCCTCTCCCCTCATGGATACCCTCCTGCAAATACCTGAATTAT
CTACCTACGCCGAGGTGTACAACCTGACCGGCGGCATCGTGGAGATCAAT
CCACTTTTCCTCAAGCGCTACAACTACGACGAAGACAAACGTAACTACAC
ATTCATTGCGCCCACTAATGATGTAAGCTTTTCATCCATTCTGTCAGATT
ATCGCAGACAGACATTTAACCAGTCAAACGCTTAGGCATGGGCCAAGATT
CCCGACGCCATCTTTACAACTCTCATGACTCAACAAGCCTACCCTTTAAC
CGAGGCACTTCTGCGCACGCACATCATCGAGGCTCGTCTTACGGCATCCG
AGCTTGTCAAGGTGTCTGAAAGCGAAGGCGCAGGAGGAATTTCTACTTCA
CTCCAGCTGGCCAATACTACCGAGCAATACCACAACGGGGTTTTGACCAA
AACGGTGCAGGGATACTACATTGACTCTGTCAATTCCTCAAATGGTACCA
TCCAGATTGATGATCAAGCTGCTATCGTGACGGCAAATATTGTTGCAGAC
AATGGTCTGATCCATGCGATCGACCAGGTCATTGACCCTTTCCTGATCTA
CGGCGGTGGTCCCAGCAATCGTAAATTGGCGCCGACTAGTGAGACCACAA
ACTTGACCATCGGAGAGTTACTAAAGAGTGACTCGCGCCTTGTGAATTCT
TCGAAGATCCTTACTGAGAATTCCCCGGACACGTTGCGACGTTTGTCGAA
ACAGACGGGGAGTATGCAGTTCTTCGTTGCTCCACAAAATGAGGCTTATG
ACCTGATGCCTACGATCCTTCCCATATTTCGTGAGTCCCCCCTTCCAGTG
TTGCTTTATACTATGAGTCGTGGAATAATGACCCATATTCAACTCAAACA
GATACCCTCGTTGCGCCATACAAAAGCCCATTCAACACTCTAATGTGGCA
ATATGGCTGGCTTGACAGTGATGGCGAGACCTTTGCTGATTTAAATTTCA
CCCGTCCTGTCACAGTAGCCAGCGACATCACAGGGCTGAATATCACCGTC
ACCCAAGAGAAGAATGCTATCTTCATTATGAACGCAGGTCTTGTCACACA
AGTGAAGGCAGCCAATGGGTACCTCTGGATTGTGGATAGGTGGTTAGACC
CCTTATACCAGGCCTTTGGTGCCATTAACCGATTTGGCGAACCTGAGTGG
CCATGA back to topCoding sequence (CDS) from alignment at ch2:1856706..1857961- >KJC3_002168-T1 ID=KJC3_002168-T1|Name=KJC3_002168-T1|organism=Aspergillus niger KJC3|type=CDS|length=3366bp|location=Sequence derived from alignment at ch2:1856706..1857961- (Aspergillus niger KJC3)
ATACCCTCGTTGCGCCATACAAAAGCCCATTCAACACTCTAATGTGGCAA
TATGGCTGGCTTGACAGTGATGGCGAGACCTTTGCTGATTTAAATTTCAC
CCGTCCTGTCACAGTAGCCAGCGACATCACAGGGCTGAATATCACCGTCA
CCCAAGAGAAGAATGCTATCTTCATTATGAACGCAGGTCTTGTCACACAA
GTGAAGGCAGCCAATGGGTACCTCTGGATTGTGGATAGGTGGTTAGACCC
CTTATACCAGGCCTTTGGTGCCATTAACCGATTTGGCGAACCTGAGTGGC
CATGAGCATGGGCCAAGATTCCCGACGCCATCTTTACAACTCTCATGACT
CAACAAGCCTACCCTTTAACCGAGGCACTTCTGCGCACGCACATCATCGA
GGCTCGTCTTACGGCATCCGAGCTTGTCAAGGTGTCTGAAAGCGAAGGCG
CAGGAGGAATTTCTACTTCACTCCAGCTGGCCAATACTACCGAGCAATAC
CACAACGGGGTTTTGACCAAAACGGTGCAGGGATACTACATTGACTCTGT
CAATTCCTCAAATGGTACCATCCAGATTGATGATCAAGCTGCTATCGTGA
CGGCAAATATTGTTGCAGACAATGGTCTGATCCATGCGATCGACCAGGTC
ATTGACCCTTTCCTGATCTACGGCGGTGGTCCCAGCAATCGTAAATTGGC
GCCGACTAGTGAGACCACAAACTTGACCATCGGAGAGTTACTAAAGAGTG
ACTCGCGCCTTGTGAATTCTTCGAAGATCCTTACTGAGAATTCCCCGGAC
ACGTTGCGACGTTTGTCGAAACAGACGGGGAGTATGCAGTTCTTCGTTGC
TCCACAAAATGAGGCTTATGACCTGATGCCTACGATCCTTCCCATATTTC
ATGACTATTCATTTCACCGTCGCAGCACTAGCTGCCATTATGATTCAATC
GGTTACAGCCTCTCCCCTCATGGATACCCTCCTGCAAATACCTGAATTAT
CTACCTACGCCGAGGTGTACAACCTGACCGGCGGCATCGTGGAGATCAAT
CCACTTTTCCTCAAGCGCTACAACTACGACGAAGACAAACGTAACTACAC
ATTCATTGCGCCCACTAATGATATACCCTCGTTGCGCCATACAAAAGCCC
ATTCAACACTCTAATGTGGCAATATGGCTGGCTTGACAGTGATGGCGAGA
CCTTTGCTGATTTAAATTTCACCCGTCCTGTCACAGTAGCCAGCGACATC
ACAGGGCTGAATATCACCGTCACCCAAGAGAAGAATGCTATCTTCATTAT
GAACGCAGGTCTTGTCACACAAGTGAAGGCAGCCAATGGGTACCTCTGGA
TTGTGGATAGGTGGTTAGACCCCTTATACCAGGCCTTTGGTGCCATTAAC
CGATTTGGCGAACCTGAGTGGCCATGAGCATGGGCCAAGATTCCCGACGC
CATCTTTACAACTCTCATGACTCAACAAGCCTACCCTTTAACCGAGGCAC
TTCTGCGCACGCACATCATCGAGGCTCGTCTTACGGCATCCGAGCTTGTC
AAGGTGTCTGAAAGCGAAGGCGCAGGAGGAATTTCTACTTCACTCCAGCT
GGCCAATACTACCGAGCAATACCACAACGGGGTTTTGACCAAAACGGTGC
AGGGATACTACATTGACTCTGTCAATTCCTCAAATGGTACCATCCAGATT
GATGATCAAGCTGCTATCGTGACGGCAAATATTGTTGCAGACAATGGTCT
GATCCATGCGATCGACCAGGTCATTGACCCTTTCCTGATCTACGGCGGTG
GTCCCAGCAATCGTAAATTGGCGCCGACTAGTGAGACCACAAACTTGACC
ATCGGAGAGTTACTAAAGAGTGACTCGCGCCTTGTGAATTCTTCGAAGAT
CCTTACTGAGAATTCCCCGGACACGTTGCGACGTTTGTCGAAACAGACGG
GGAGTATGCAGTTCTTCGTTGCTCCACAAAATGAGGCTTATGACCTGATG
CCTACGATCCTTCCCATATTTCATGACTATTCATTTCACCGTCGCAGCAC
TAGCTGCCATTATGATTCAATCGGTTACAGCCTCTCCCCTCATGGATACC
CTCCTGCAAATACCTGAATTATCTACCTACGCCGAGGTGTACAACCTGAC
CGGCGGCATCGTGGAGATCAATCCACTTTTCCTCAAGCGCTACAACTACG
ACGAAGACAAACGTAACTACACATTCATTGCGCCCACTAATGATATACCC
TCGTTGCGCCATACAAAAGCCCATTCAACACTCTAATGTGGCAATATGGC
TGGCTTGACAGTGATGGCGAGACCTTTGCTGATTTAAATTTCACCCGTCC
TGTCACAGTAGCCAGCGACATCACAGGGCTGAATATCACCGTCACCCAAG
AGAAGAATGCTATCTTCATTATGAACGCAGGTCTTGTCACACAAGTGAAG
GCAGCCAATGGGTACCTCTGGATTGTGGATAGGTGGTTAGACCCCTTATA
CCAGGCCTTTGGTGCCATTAACCGATTTGGCGAACCTGAGTGGCCATGAG
CATGGGCCAAGATTCCCGACGCCATCTTTACAACTCTCATGACTCAACAA
GCCTACCCTTTAACCGAGGCACTTCTGCGCACGCACATCATCGAGGCTCG
TCTTACGGCATCCGAGCTTGTCAAGGTGTCTGAAAGCGAAGGCGCAGGAG
GAATTTCTACTTCACTCCAGCTGGCCAATACTACCGAGCAATACCACAAC
GGGGTTTTGACCAAAACGGTGCAGGGATACTACATTGACTCTGTCAATTC
CTCAAATGGTACCATCCAGATTGATGATCAAGCTGCTATCGTGACGGCAA
ATATTGTTGCAGACAATGGTCTGATCCATGCGATCGACCAGGTCATTGAC
CCTTTCCTGATCTACGGCGGTGGTCCCAGCAATCGTAAATTGGCGCCGAC
TAGTGAGACCACAAACTTGACCATCGGAGAGTTACTAAAGAGTGACTCGC
GCCTTGTGAATTCTTCGAAGATCCTTACTGAGAATTCCCCGGACACGTTG
CGACGTTTGTCGAAACAGACGGGGAGTATGCAGTTCTTCGTTGCTCCACA
AAATGAGGCTTATGACCTGATGCCTACGATCCTTCCCATATTTCATGACT
ATTCATTTCACCGTCGCAGCACTAGCTGCCATTATGATTCAATCGGTTAC
AGCCTCTCCCCTCATGGATACCCTCCTGCAAATACCTGAATTATCTACCT
ACGCCGAGGTGTACAACCTGACCGGCGGCATCGTGGAGATCAATCCACTT
TTCCTCAAGCGCTACAACTACGACGAAGACAAACGTAACTACACATTCAT
TGCGCCCACTAATGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR036378 |
| DBxref | InterPro:IPR000782 |
| DBxref | PFAM:PF02469 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1856706..1857961 - |
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