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KJC3_002184-T1, KJC3_002184-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002184-T1
Unique NameKJC3_002184-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1894403..1895927+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002184-T1 ID=KJC3_002184-T1|Name=KJC3_002184-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1525bp|location=Sequence derived from alignment at ch2:1894403..1895927+ (Aspergillus niger KJC3)
ATGACCTGGTCCACCTCCTTTCTCGTGGCAACTTCCTTGCTCTTAATTAC
CAACTCCGTCCATGCCCAACTCACAGGATCTGTTGGACCCTTGACCTCCG
CCTCAGACAAGGCCGCCGTGAAGACCTGCAACGTCCTCGACTACGGAGCC
ACTTCGGACAACACCACCGATGTGGGACAACCTATCATCGACGCCTTTGC
TGACTGCGGTAGCGGCAGTCTCATCTACATCCCTGAGGGTGACTATCTTC
TGAAGAACTGGGTCTCGTTGGAGAATGGCTCTGCCTGGGCTATCCAGCTG
GATGGCGTGCTCTACCGGGACTCTTCACCTTCTTCCCAGTCATACATGTT
CGCGATAACCGGTGGCAGTGATTTTGAGCTCTTTAGTTCAAACGCAACGG
GTGCTATCCAAGGTAGCGGCTACCTCTACCACCGAGATGATACTTACACT
GGTCCCCGGATCTTGCACATCTCCGGAGTGTCGGACTGGTCTGTTCATGA
CCTGGTGTTGGTCGACGCGCCAATGTTCCACTTTGTTATTGACGGCGCTT
ACAATGGAGAGGTGTACAACATGGCTATCCGTGGTGGTGATCATGGTGGT
CTGGATGGTATCGATGTGTATGGTGACAACATCTGGATTCACGACGTTAG
TGCCGCTGCTCCTGAATGTGCATTTGACTTCCGAACATGCTAATGCTACG
GCAGGTTATGGTCACCAACAAGGATGAATGTGTCACCACCAAAGTAAGAA
AACCCCGATACCTCACGACTGCCGATGTACTAATCCGAACTGCAACAGAC
CAACTCCCACAATTTCCTGATCGAGAACATTTACTGCAACTCCAGTGGCG
GATGCGCCATCGGATCCCTGGGTTCCGGCGTCAACGTCACGAACATCCTC
TACCGCAACGTCTATACCTGGGACTCGAACCAGATGATGATGATCAAAAG
CAACGGTGGCTCAGGCGATGTACACAACGTTGTCTTCGAGAACTTCATCG
GTATATAACCTTATCTCTCCTCTACCCTTCCCCGATACATAACCTAATGA
TGGAATAGGCCACGGAAACGCCTACTCCCTCGACCTCGACAGTTACTGGA
GCAGCATGGACGCCGTCGACGGCGACGGCATCTACTACCACAACATCACA
TTCCAGAACTGGACGGGAACCGCCGTCGACGGTGAAACTCGGCCGCCTAT
TCGGGTCATCTGCCCTGAAGACACGCCCTGCACCGAGATTACCCTTACCC
AGATTGACCTGTGGGTTGAGGAAGGTGCTTACGATGAATACTACTGCGCG
AACGCCTACGGATCCGGCTACTGCCTTGACTCTGCTACTGGCACCACGAC
TCCTTACACAACCACTACTTACCTGAATACCGCCCCAACGGGGTACGAGG
CCCCGACTATGACTGATGATTTGGCCACCGCGTTTGGCACGACGGCGTCT
ATTCCTATCCCTGCTATCCCGGCTTCGTTCTTCCCTGGTGTTACGCCGAT
CAGCGCCGTGGCTGGGAGGTCTTGA
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Coding sequence (CDS) from alignment at ch2:1894403..1895927+

>KJC3_002184-T1 ID=KJC3_002184-T1|Name=KJC3_002184-T1|organism=Aspergillus niger KJC3|type=CDS|length=5412bp|location=Sequence derived from alignment at ch2:1894403..1895927+ (Aspergillus niger KJC3)
ATGACCTGGTCCACCTCCTTTCTCGTGGCAACTTCCTTGCTCTTAATTAC
CAACTCCGTCCATGCCCAACTCACAGGATCTGTTGGACCCTTGACCTCCG
CCTCAGACAAGGCCGCCGTGAAGACCTGCAACGTCCTCGACTACGGAGCC
ACTTCGGACAACACCACCGATGTGGGACAACCTATCATCGACGCCTTTGC
TGACTGCGGTAGCGGCAGTCTCATCTACATCCCTGAGGGTGACTATCTTC
TGAAGAACTGGGTCTCGTTGGAGAATGGCTCTGCCTGGGCTATCCAGCTG
GATGGCGTGCTCTACCGGGACTCTTCACCTTCTTCCCAGTCATACATGTT
CGCGATAACCGGTGGCAGTGATTTTGAGCTCTTTAGTTCAAACGCAACGG
GTGCTATCCAAGGTAGCGGCTACCTCTACCACCGAGATGATACTTACACT
GGTCCCCGGATCTTGCACATCTCCGGAGTGTCGGACTGGTCTGTTCATGA
CCTGGTGTTGGTCGACGCGCCAATGTTCCACTTTGTTATTGACGGCGCTT
ACAATGGAGAGGTGTACAACATGGCTATCCGTGGTGGTGATCATGGTGGT
CTGGATGGTATCGATGTGTATGGTGACAACATCTGGATTCACGACGTTAT
GGTCACCAACAAGGATGAATGTGTCACCACCAAAACCAACTCCCACAATT
TCCTGATCGAGAACATTTACTGCAACTCCAGTGGCGGATGCGCCATCGGA
TCCCTGGGTTCCGGCGTCAACGTCACGAACATCCTCTACCGCAACGTCTA
TACCTGGGACTCGAACCAGATGATGATGATCAAAAGCAACGGTGGCTCAG
GCGATGTACACAACGTTGTCTTCGAGAACTTCATCGGCCACGGAAACGCC
TACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCCGTCGACGG
CGACGGCATCTACTACCACAACATCACATTCCAGAACTGGACGGGAACCG
CCGTCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGAC
ACGCCCTGCACCGAGATTACCCTTACCCAGATTGACCTGTGGGTTGAGGA
AGGTGCTTACGATGAATACTACTGCGCGAACGCCTACGGATCCGGCTACT
GCCTTGACTCTGCTACTGGCACCACGACTCCTTACACAACCACTACTTAC
CTGAATACCGCCCCAACGGGGTACGAGGCCCCGACTATGACTGATGATTT
GGCCACCGCGTTTGGCACGACGGCGTCTATTCCTATCCCTGCTATCCCGG
CTTCGTTCTTCCCTGGTGTTACGCCGATCAGCGCCGTGGCTGGGAGGTCT
TGAATGACCTGGTCCACCTCCTTTCTCGTGGCAACTTCCTTGCTCTTAAT
TACCAACTCCGTCCATGCCCAACTCACAGGATCTGTTGGACCCTTGACCT
CCGCCTCAGACAAGGCCGCCGTGAAGACCTGCAACGTCCTCGACTACGGA
GCCACTTCGGACAACACCACCGATGTGGGACAACCTATCATCGACGCCTT
TGCTGACTGCGGTAGCGGCAGTCTCATCTACATCCCTGAGGGTGACTATC
TTCTGAAGAACTGGGTCTCGTTGGAGAATGGCTCTGCCTGGGCTATCCAG
CTGGATGGCGTGCTCTACCGGGACTCTTCACCTTCTTCCCAGTCATACAT
GTTCGCGATAACCGGTGGCAGTGATTTTGAGCTCTTTAGTTCAAACGCAA
CGGGTGCTATCCAAGGTAGCGGCTACCTCTACCACCGAGATGATACTTAC
ACTGGTCCCCGGATCTTGCACATCTCCGGAGTGTCGGACTGGTCTGTTCA
TGACCTGGTGTTGGTCGACGCGCCAATGTTCCACTTTGTTATTGACGGCG
CTTACAATGGAGAGGTGTACAACATGGCTATCCGTGGTGGTGATCATGGT
GGTCTGGATGGTATCGATGTGTATGGTGACAACATCTGGATTCACGACGT
TATGGTCACCAACAAGGATGAATGTGTCACCACCAAAACCAACTCCCACA
ATTTCCTGATCGAGAACATTTACTGCAACTCCAGTGGCGGATGCGCCATC
GGATCCCTGGGTTCCGGCGTCAACGTCACGAACATCCTCTACCGCAACGT
CTATACCTGGGACTCGAACCAGATGATGATGATCAAAAGCAACGGTGGCT
CAGGCGATGTACACAACGTTGTCTTCGAGAACTTCATCGGCCACGGAAAC
GCCTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCCGTCGA
CGGCGACGGCATCTACTACCACAACATCACATTCCAGAACTGGACGGGAA
CCGCCGTCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAA
GACACGCCCTGCACCGAGATTACCCTTACCCAGATTGACCTGTGGGTTGA
GGAAGGTGCTTACGATGAATACTACTGCGCGAACGCCTACGGATCCGGCT
ACTGCCTTGACTCTGCTACTGGCACCACGACTCCTTACACAACCACTACT
TACCTGAATACCGCCCCAACGGGGTACGAGGCCCCGACTATGACTGATGA
TTTGGCCACCGCGTTTGGCACGACGGCGTCTATTCCTATCCCTGCTATCC
CGGCTTCGTTCTTCCCTGGTGTTACGCCGATCAGCGCCGTGGCTGGGAGG
TCTTGAATGACCTGGTCCACCTCCTTTCTCGTGGCAACTTCCTTGCTCTT
AATTACCAACTCCGTCCATGCCCAACTCACAGGATCTGTTGGACCCTTGA
CCTCCGCCTCAGACAAGGCCGCCGTGAAGACCTGCAACGTCCTCGACTAC
GGAGCCACTTCGGACAACACCACCGATGTGGGACAACCTATCATCGACGC
CTTTGCTGACTGCGGTAGCGGCAGTCTCATCTACATCCCTGAGGGTGACT
ATCTTCTGAAGAACTGGGTCTCGTTGGAGAATGGCTCTGCCTGGGCTATC
CAGCTGGATGGCGTGCTCTACCGGGACTCTTCACCTTCTTCCCAGTCATA
CATGTTCGCGATAACCGGTGGCAGTGATTTTGAGCTCTTTAGTTCAAACG
CAACGGGTGCTATCCAAGGTAGCGGCTACCTCTACCACCGAGATGATACT
TACACTGGTCCCCGGATCTTGCACATCTCCGGAGTGTCGGACTGGTCTGT
TCATGACCTGGTGTTGGTCGACGCGCCAATGTTCCACTTTGTTATTGACG
GCGCTTACAATGGAGAGGTGTACAACATGGCTATCCGTGGTGGTGATCAT
GGTGGTCTGGATGGTATCGATGTGTATGGTGACAACATCTGGATTCACGA
CGTTATGGTCACCAACAAGGATGAATGTGTCACCACCAAAACCAACTCCC
ACAATTTCCTGATCGAGAACATTTACTGCAACTCCAGTGGCGGATGCGCC
ATCGGATCCCTGGGTTCCGGCGTCAACGTCACGAACATCCTCTACCGCAA
CGTCTATACCTGGGACTCGAACCAGATGATGATGATCAAAAGCAACGGTG
GCTCAGGCGATGTACACAACGTTGTCTTCGAGAACTTCATCGGCCACGGA
AACGCCTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCCGT
CGACGGCGACGGCATCTACTACCACAACATCACATTCCAGAACTGGACGG
GAACCGCCGTCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCT
GAAGACACGCCCTGCACCGAGATTACCCTTACCCAGATTGACCTGTGGGT
TGAGGAAGGTGCTTACGATGAATACTACTGCGCGAACGCCTACGGATCCG
GCTACTGCCTTGACTCTGCTACTGGCACCACGACTCCTTACACAACCACT
ACTTACCTGAATACCGCCCCAACGGGGTACGAGGCCCCGACTATGACTGA
TGATTTGGCCACCGCGTTTGGCACGACGGCGTCTATTCCTATCCCTGCTA
TCCCGGCTTCGTTCTTCCCTGGTGTTACGCCGATCAGCGCCGTGGCTGGG
AGGTCTTGAATGACCTGGTCCACCTCCTTTCTCGTGGCAACTTCCTTGCT
CTTAATTACCAACTCCGTCCATGCCCAACTCACAGGATCTGTTGGACCCT
TGACCTCCGCCTCAGACAAGGCCGCCGTGAAGACCTGCAACGTCCTCGAC
TACGGAGCCACTTCGGACAACACCACCGATGTGGGACAACCTATCATCGA
CGCCTTTGCTGACTGCGGTAGCGGCAGTCTCATCTACATCCCTGAGGGTG
ACTATCTTCTGAAGAACTGGGTCTCGTTGGAGAATGGCTCTGCCTGGGCT
ATCCAGCTGGATGGCGTGCTCTACCGGGACTCTTCACCTTCTTCCCAGTC
ATACATGTTCGCGATAACCGGTGGCAGTGATTTTGAGCTCTTTAGTTCAA
ACGCAACGGGTGCTATCCAAGGTAGCGGCTACCTCTACCACCGAGATGAT
ACTTACACTGGTCCCCGGATCTTGCACATCTCCGGAGTGTCGGACTGGTC
TGTTCATGACCTGGTGTTGGTCGACGCGCCAATGTTCCACTTTGTTATTG
ACGGCGCTTACAATGGAGAGGTGTACAACATGGCTATCCGTGGTGGTGAT
CATGGTGGTCTGGATGGTATCGATGTGTATGGTGACAACATCTGGATTCA
CGACGTTATGGTCACCAACAAGGATGAATGTGTCACCACCAAAACCAACT
CCCACAATTTCCTGATCGAGAACATTTACTGCAACTCCAGTGGCGGATGC
GCCATCGGATCCCTGGGTTCCGGCGTCAACGTCACGAACATCCTCTACCG
CAACGTCTATACCTGGGACTCGAACCAGATGATGATGATCAAAAGCAACG
GTGGCTCAGGCGATGTACACAACGTTGTCTTCGAGAACTTCATCGGCCAC
GGAAACGCCTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGC
CGTCGACGGCGACGGCATCTACTACCACAACATCACATTCCAGAACTGGA
CGGGAACCGCCGTCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGC
CCTGAAGACACGCCCTGCACCGAGATTACCCTTACCCAGATTGACCTGTG
GGTTGAGGAAGGTGCTTACGATGAATACTACTGCGCGAACGCCTACGGAT
CCGGCTACTGCCTTGACTCTGCTACTGGCACCACGACTCCTTACACAACC
ACTACTTACCTGAATACCGCCCCAACGGGGTACGAGGCCCCGACTATGAC
TGATGATTTGGCCACCGCGTTTGGCACGACGGCGTCTATTCCTATCCCTG
CTATCCCGGCTTCGTTCTTCCCTGGTGTTACGCCGATCAGCGCCGTGGCT
GGGAGGTCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002184KJC3_002184Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002184-T1.exon1KJC3_002184-T1.exon1Aspergillus niger KJC3exon
KJC3_002184-T1.exon2KJC3_002184-T1.exon2Aspergillus niger KJC3exon
KJC3_002184-T1.exon3KJC3_002184-T1.exon3Aspergillus niger KJC3exon
KJC3_002184-T1.exon4KJC3_002184-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002184-T1.cdsKJC3_002184-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002184-T1KJC3_002184-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1894403..1895927 +
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