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KJC3_002188-T1, KJC3_002188-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002188-T1
Unique NameKJC3_002188-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1903622..1905370+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002188-T1 ID=KJC3_002188-T1|Name=KJC3_002188-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1749bp|location=Sequence derived from alignment at ch2:1903622..1905370+ (Aspergillus niger KJC3)
ATTATTCATATGCCCATATCGCCATCTCGACTTCCACAGCAAATGGCTGA
GAAAATTCCCGTCGAGGATCTACGCACCCCCCAGGCGAACAGCCTGTCAT
CTGGCGGCAGCAACTCTCGAGCAGACGATGCGAGCGACTATGAGCTGACT
GGAATCCCACTATTCCTGGTCATCACTGGACTTGGTCTTTCTATATTTCT
CATGTCACTGGACTCGTCCATCATTGCCACGGCTATTCCCCGGATCACGT
CACAATTCAACAGCACCGGTGATATTGGTTGGTATGGAAGTGCATACTCC
TTTGCGATGTGCGCCTTGCAGCCTATGGCAGGTAAATTATTTGGAAGCTT
TGAGATGAAAGTGAGTCTCACCAAAATGTCCAGTTGTAGATGAAAAGCCT
TTTAACAGTATTAGGGCATGTTCCTCGGATGTCTTGTCGTCTTCGAGCTT
GGCTCATTGCTCTGCGCCCTTGCAGTCAACAGTCCTATGCTCATCATCGG
GCGTGCTATAACCGGAATTGGGGCAGCAGGATGCTTTACAGGGGCCTTCT
GTATTGTCGCCGTTTCCATCCCGCTGGTCAAGCGACCCTTATATATTGGA
ATCCTTCAGTCAACCTTTGGCATTGCCACTATCATTGGACCCGTATTAGG
CGGTGCGCTCACGGAGCATGCGACCTGGAGGTGGTGTTTTTGGATTAATC
TCCCCATTGGTGCTATCACCATTTTCTCACTGGTCTTCTTCTTCAAACCG
CCTCCGCGCGACAGGACGAAAGCTCCGTCGGTTCTTCGCAGACTGGAAAA
GTTGGACTTCCTGGGCGCTTTTCTATTTGCTCCGGCCATCATCATGATAT
TTTTGGCCCTTCAATGGGGAGGGACCGAACACGCTTGGAAGAGTGCTACT
ATAGTTGGTCTCTTCATTGGAGGTGCGTTTGTCGGTCTTATCTTTGCCCT
CTGGCAAATACGGAAGGGCGACAATGCCATGATTCCACCGCGTCTGATGA
CTGAGCGTACGATGCTCTTCTCCTGTTTCAGCGAGTTTTTCGCCATGGGT
GCCGTTTACATTTCGATATACTACCTTCCAGAATGGTTCCAGGTCATCAA
AAACGCCTCGCCCACGAAATCTGGAGTCATGTACCTCCCTCTAGCGCTGT
CAGATGTTTTCTCTGCAACCTTGACAGGCGCCTCACTTAAGTATCTTGGA
TACCCAAATCCATACATGCTCCTTGGAACGGGCCTGATGAGCATAGCAAC
GGGACTGTTCTCTACCTTTTCTCAAAGAACTCCACACCAGCAGTGGATCC
CATTCCAAGTCCTTCAAGGCCTTGGTGTGGGAATGACCCTCTCAATGCCC
TATGTTGCGACACAAGCAGTCCTCAAACCCGAAGATGTCCCCGTCGGTAC
ATCATTACTGCAATGCTTCCAATTCTTCGGGGCTTCCGTGAACCTCGCGA
TCGCGGAGGCTATCTTCGAGAACAAACTTGTCTCGCGACTGGACAGTCGG
GGCTTTAATGGCCACGAGATAGAGAACATTCTCAGGGCAGGCTCCGCCGA
AGCGAGGAGCGTGGTTTCTGGGGCGCACCTTCCAGGCGTATTAGATGCAT
ACAACTACGCGATCACCAGTACATTCTACGTCGCAACCAGTGTTGCCGCC
GTTGCTTTCCTTCTTTCACTCGGGATCCGCTGGAGGAGTGTCAAGCCGAA
GCCCCAGGCTGCTGTTTCCGATGAGGAGGCTAGGTCGTCTAGTCTGTAG
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Coding sequence (CDS) from alignment at ch2:1903622..1905370+

>KJC3_002188-T1 ID=KJC3_002188-T1|Name=KJC3_002188-T1|organism=Aspergillus niger KJC3|type=CDS|length=3372bp|location=Sequence derived from alignment at ch2:1903622..1905370+ (Aspergillus niger KJC3)
ATGCCCATATCGCCATCTCGACTTCCACAGCAAATGGCTGAGAAAATTCC
CGTCGAGGATCTACGCACCCCCCAGGCGAACAGCCTGTCATCTGGCGGCA
GCAACTCTCGAGCAGACGATGCGAGCGACTATGAGCTGACTGGAATCCCA
CTATTCCTGGTCATCACTGGACTTGGTCTTTCTATATTTCTCATGTCACT
GGACTCGTCCATCATTGCCACGGCTATTCCCCGGATCACGTCACAATTCA
ACAGCACCGGTGATATTGGTTGGTATGGAAGTGCATACTCCTTTGCGATG
TGCGCCTTGCAGCCTATGGCAGGTAAATTATTTGGAAGCTTTGAGATGAA
AGGCATGTTCCTCGGATGTCTTGTCGTCTTCGAGCTTGGCTCATTGCTCT
GCGCCCTTGCAGTCAACAGTCCTATGCTCATCATCGGGCGTGCTATAACC
GGAATTGGGGCAGCAGGATGCTTTACAGGGGCCTTCTGTATTGTCGCCGT
TTCCATCCCGCTGGTCAAGCGACCCTTATATATTGGAATCCTTCAGTCAA
CCTTTGGCATTGCCACTATCATTGGACCCGTATTAGGCGGTGCGCTCACG
GAGCATGCGACCTGGAGGTGGTGTTTTTGGATTAATCTCCCCATTGGTGC
TATCACCATTTTCTCACTGGTCTTCTTCTTCAAACCGCCTCCGCGCGACA
GGACGAAAGCTCCGTCGGTTCTTCGCAGACTGGAAAAGTTGGACTTCCTG
GGCGCTTTTCTATTTGCTCCGGCCATCATCATGATATTTTTGGCCCTTCA
ATGGGGAGGGACCGAACACGCTTGGAAGAGTGCTACTATAGTTGGTCTCT
TCATTGGAGGTGCGTTTGTCGGTCTTATCTTTGCCCTCTGGCAAATACGG
AAGGGCGACAATGCCATGATTCCACCGCGTCTGATGACTGAGCGTACGAT
GCTCTTCTCCTGTTTCAGCGAGTTTTTCGCCATGGGTGCCGTTTACATTT
CGATATACTACCTTCCAGAATGGTTCCAGGTCATCAAAAACGCCTCGCCC
ACGAAATCTGGAGTCATGTACCTCCCTCTAGCGCTGTCAGATGTTTTCTC
TGCAACCTTGACAGGCGCCTCACTTAAGTATCTTGGATACCCAAATCCAT
ACATGCTCCTTGGAACGGGCCTGATGAGCATAGCAACGGGACTGTTCTCT
ACCTTTTCTCAAAGAACTCCACACCAGCAGTGGATCCCATTCCAAGTCCT
TCAAGGCCTTGGTGTGGGAATGACCCTCTCAATGCCCTATGTTGCGACAC
AAGCAGTCCTCAAACCCGAAGATGTCCCCGTCGGTACATCATTACTGCAA
TGCTTCCAATTCTTCGGGGCTTCCGTGAACCTCGCGATCGCGGAGGCTAT
CTTCGAGAACAAACTTGTCTCGCGACTGGACAGTCGGGGCTTTAATGGCC
ACGAGATAGAGAACATTCTCAGGGCAGGCTCCGCCGAAGCGAGGAGCGTG
GTTTCTGGGGCGCACCTTCCAGGCGTATTAGATGCATACAACTACGCGAT
CACCAGTACATTCTACGTCGCAACCAGTGTTGCCGCCGTTGCTTTCCTTC
TTTCACTCGGGATCCGCTGGAGGAGTGTCAAGCCGAAGCCCCAGGCTGCT
GTTTCCGATGAGGAGGCTAGGTCGTCTAGTCTGTAGATGCCCATATCGCC
ATCTCGACTTCCACAGCAAATGGCTGAGAAAATTCCCGTCGAGGATCTAC
GCACCCCCCAGGCGAACAGCCTGTCATCTGGCGGCAGCAACTCTCGAGCA
GACGATGCGAGCGACTATGAGCTGACTGGAATCCCACTATTCCTGGTCAT
CACTGGACTTGGTCTTTCTATATTTCTCATGTCACTGGACTCGTCCATCA
TTGCCACGGCTATTCCCCGGATCACGTCACAATTCAACAGCACCGGTGAT
ATTGGTTGGTATGGAAGTGCATACTCCTTTGCGATGTGCGCCTTGCAGCC
TATGGCAGGTAAATTATTTGGAAGCTTTGAGATGAAAGGCATGTTCCTCG
GATGTCTTGTCGTCTTCGAGCTTGGCTCATTGCTCTGCGCCCTTGCAGTC
AACAGTCCTATGCTCATCATCGGGCGTGCTATAACCGGAATTGGGGCAGC
AGGATGCTTTACAGGGGCCTTCTGTATTGTCGCCGTTTCCATCCCGCTGG
TCAAGCGACCCTTATATATTGGAATCCTTCAGTCAACCTTTGGCATTGCC
ACTATCATTGGACCCGTATTAGGCGGTGCGCTCACGGAGCATGCGACCTG
GAGGTGGTGTTTTTGGATTAATCTCCCCATTGGTGCTATCACCATTTTCT
CACTGGTCTTCTTCTTCAAACCGCCTCCGCGCGACAGGACGAAAGCTCCG
TCGGTTCTTCGCAGACTGGAAAAGTTGGACTTCCTGGGCGCTTTTCTATT
TGCTCCGGCCATCATCATGATATTTTTGGCCCTTCAATGGGGAGGGACCG
AACACGCTTGGAAGAGTGCTACTATAGTTGGTCTCTTCATTGGAGGTGCG
TTTGTCGGTCTTATCTTTGCCCTCTGGCAAATACGGAAGGGCGACAATGC
CATGATTCCACCGCGTCTGATGACTGAGCGTACGATGCTCTTCTCCTGTT
TCAGCGAGTTTTTCGCCATGGGTGCCGTTTACATTTCGATATACTACCTT
CCAGAATGGTTCCAGGTCATCAAAAACGCCTCGCCCACGAAATCTGGAGT
CATGTACCTCCCTCTAGCGCTGTCAGATGTTTTCTCTGCAACCTTGACAG
GCGCCTCACTTAAGTATCTTGGATACCCAAATCCATACATGCTCCTTGGA
ACGGGCCTGATGAGCATAGCAACGGGACTGTTCTCTACCTTTTCTCAAAG
AACTCCACACCAGCAGTGGATCCCATTCCAAGTCCTTCAAGGCCTTGGTG
TGGGAATGACCCTCTCAATGCCCTATGTTGCGACACAAGCAGTCCTCAAA
CCCGAAGATGTCCCCGTCGGTACATCATTACTGCAATGCTTCCAATTCTT
CGGGGCTTCCGTGAACCTCGCGATCGCGGAGGCTATCTTCGAGAACAAAC
TTGTCTCGCGACTGGACAGTCGGGGCTTTAATGGCCACGAGATAGAGAAC
ATTCTCAGGGCAGGCTCCGCCGAAGCGAGGAGCGTGGTTTCTGGGGCGCA
CCTTCCAGGCGTATTAGATGCATACAACTACGCGATCACCAGTACATTCT
ACGTCGCAACCAGTGTTGCCGCCGTTGCTTTCCTTCTTTCACTCGGGATC
CGCTGGAGGAGTGTCAAGCCGAAGCCCCAGGCTGCTGTTTCCGATGAGGA
GGCTAGGTCGTCTAGTCTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002188KJC3_002188Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002188-T1.utr5p1KJC3_002188-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002188-T1.exon1KJC3_002188-T1.exon1Aspergillus niger KJC3exon
KJC3_002188-T1.exon2KJC3_002188-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002188-T1.cdsKJC3_002188-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002188-T1KJC3_002188-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF06609
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1903622..1905370 +
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