You are here

Home

KJC3_002193-T1, KJC3_002193-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002193-T1
Unique NameKJC3_002193-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1923071..1924252+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002193-T1 ID=KJC3_002193-T1|Name=KJC3_002193-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1182bp|location=Sequence derived from alignment at ch2:1923071..1924252+ (Aspergillus niger KJC3)
CATCCATTGCGATCAACAGAATGGCACCACCCCTTGTTTTCGTGACCGGT
GCAACCGGCTTCATCGGTTCACAGGTCGTCGCTACTACCCTCAAAGCCGG
GTATCGCGTGCGTCTGAGTATTCGCAAAGCGGAACAAGAAGCTACCCTAC
GAGAGCTCCATCCCGGATATGGCGACAAAATCGAAACATCCATCATACCT
GACATCTCTCGACGGGAATCGTTCAAGGATGCCTTTCAGAATGTAGATTA
CGTTTTTCACCTTGCCTCTCCAATCCCTGGCGGAGGAAACGACTTCAAGC
AGGACTACGTTGAGCCGGCTGTCAGAGGCACCGAGGCAATTCTGTATGCT
GCTTTGGAGTTTCCACAGATCAAGAAAGTCATCGTAATGTCTTCTGTGCT
TGCGCTAGCTCCTGTGACTGCCCTGATTACCAAGGATATTTCGGTGAAAG
GTAAGTAGCACAGCAGACAATTACCTTGAATGATCACTAACGTAGAATAG
ACAACACTGGCGAGATCATCCCCGTAGACATGAACATGTCCTTCCCGGAC
GATTTCTCTGGCCACGCGCTCAAGTATGCTGCTTCGAAGGTGCTAGCACA
CCAAGCGACACGTTCGTTTTTGGAAAACAATAGTCCTCATTATAAATTAA
TCACACTCCACCCGACATTCGTCCTAGGGCCCAGTATGATCCAGAAGACC
CCGGAGGAGATCAGTGGGATGAACGCTCTTTTCTGGTTGTCGGTTACCTC
AGGACAAACTCGAATCGGTAATGCCTGGGTGCATGTTTACGACGTCGCGG
ATGCACATATCAAAGTGCTGGAGAAATATATCCAGAGTGGAACAGAGTTC
ATCTTATCCAGGCCAGCTGTATTCTGGGAGCATGCGGCAGATTTCATCAA
GGAGAAGTATCCGGCTGTTGAGTGTAAGCTGGAGCCCCCCTTTGAGGGAC
ATTGGGCGCTGGATACCACCACCGCTGATCGCATTCTGGGGATGCGGTGG
AGGTCGGAGGAGCAGATTATTGGGGACGTTATTGAGCAACAGTTGGGATT
GAGGGGAAACGCTCGTAATTAGGCAAATGGGGTGGGGATCAAGTGTTTAT
GATACTGTATGGGTGTTTCTTCGGAAATTGGAATGGACAGTAATTAATGG
CGGGATGGCACTGTTGTGATATATAATGAAAG
back to top

Coding sequence (CDS) from alignment at ch2:1923071..1924252+

>KJC3_002193-T1 ID=KJC3_002193-T1|Name=KJC3_002193-T1|organism=Aspergillus niger KJC3|type=CDS|length=2004bp|location=Sequence derived from alignment at ch2:1923071..1924252+ (Aspergillus niger KJC3)
ATGGCACCACCCCTTGTTTTCGTGACCGGTGCAACCGGCTTCATCGGTTC
ACAGGTCGTCGCTACTACCCTCAAAGCCGGGTATCGCGTGCGTCTGAGTA
TTCGCAAAGCGGAACAAGAAGCTACCCTACGAGAGCTCCATCCCGGATAT
GGCGACAAAATCGAAACATCCATCATACCTGACATCTCTCGACGGGAATC
GTTCAAGGATGCCTTTCAGAATGTAGATTACGTTTTTCACCTTGCCTCTC
CAATCCCTGGCGGAGGAAACGACTTCAAGCAGGACTACGTTGAGCCGGCT
GTCAGAGGCACCGAGGCAATTCTGTATGCTGCTTTGGAGTTTCCACAGAT
CAAGAAAGTCATCGTAATGTCTTCTGTGCTTGCGCTAGCTCCTGTGACTG
CCCTGATTACCAAGGATATTTCGGTGAAAGACAACACTGGCGAGATCATC
CCCGTAGACATGAACATGTCCTTCCCGGACGATTTCTCTGGCCACGCGCT
CAAGTATGCTGCTTCGAAGGTGCTAGCACACCAAGCGACACGTTCGTTTT
TGGAAAACAATAGTCCTCATTATAAATTAATCACACTCCACCCGACATTC
GTCCTAGGGCCCAGTATGATCCAGAAGACCCCGGAGGAGATCAGTGGGAT
GAACGCTCTTTTCTGGTTGTCGGTTACCTCAGGACAAACTCGAATCGGTA
ATGCCTGGGTGCATGTTTACGACGTCGCGGATGCACATATCAAAGTGCTG
GAGAAATATATCCAGAGTGGAACAGAGTTCATCTTATCCAGGCCAGCTGT
ATTCTGGGAGCATGCGGCAGATTTCATCAAGGAGAAGTATCCGGCTGTTG
AGTGTAAGCTGGAGCCCCCCTTTGAGGGACATTGGGCGCTGGATACCACC
ACCGCTGATCGCATTCTGGGGATGCGGTGGAGGTCGGAGGAGCAGATTAT
TGGGGACGTTATTGAGCAACAGTTGGGATTGAGGGGAAACGCTCGTAATT
AGATGGCACCACCCCTTGTTTTCGTGACCGGTGCAACCGGCTTCATCGGT
TCACAGGTCGTCGCTACTACCCTCAAAGCCGGGTATCGCGTGCGTCTGAG
TATTCGCAAAGCGGAACAAGAAGCTACCCTACGAGAGCTCCATCCCGGAT
ATGGCGACAAAATCGAAACATCCATCATACCTGACATCTCTCGACGGGAA
TCGTTCAAGGATGCCTTTCAGAATGTAGATTACGTTTTTCACCTTGCCTC
TCCAATCCCTGGCGGAGGAAACGACTTCAAGCAGGACTACGTTGAGCCGG
CTGTCAGAGGCACCGAGGCAATTCTGTATGCTGCTTTGGAGTTTCCACAG
ATCAAGAAAGTCATCGTAATGTCTTCTGTGCTTGCGCTAGCTCCTGTGAC
TGCCCTGATTACCAAGGATATTTCGGTGAAAGACAACACTGGCGAGATCA
TCCCCGTAGACATGAACATGTCCTTCCCGGACGATTTCTCTGGCCACGCG
CTCAAGTATGCTGCTTCGAAGGTGCTAGCACACCAAGCGACACGTTCGTT
TTTGGAAAACAATAGTCCTCATTATAAATTAATCACACTCCACCCGACAT
TCGTCCTAGGGCCCAGTATGATCCAGAAGACCCCGGAGGAGATCAGTGGG
ATGAACGCTCTTTTCTGGTTGTCGGTTACCTCAGGACAAACTCGAATCGG
TAATGCCTGGGTGCATGTTTACGACGTCGCGGATGCACATATCAAAGTGC
TGGAGAAATATATCCAGAGTGGAACAGAGTTCATCTTATCCAGGCCAGCT
GTATTCTGGGAGCATGCGGCAGATTTCATCAAGGAGAAGTATCCGGCTGT
TGAGTGTAAGCTGGAGCCCCCCTTTGAGGGACATTGGGCGCTGGATACCA
CCACCGCTGATCGCATTCTGGGGATGCGGTGGAGGTCGGAGGAGCAGATT
ATTGGGGACGTTATTGAGCAACAGTTGGGATTGAGGGGAAACGCTCGTAA
TTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002193KJC3_002193Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002193-T1.utr5p1KJC3_002193-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002193-T1.exon1KJC3_002193-T1.exon1Aspergillus niger KJC3exon
KJC3_002193-T1.exon2KJC3_002193-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002193-T1.cdsKJC3_002193-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002193-T1.utr3p1KJC3_002193-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002193-T1KJC3_002193-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR001509
DBxrefPFAM:PF07993
DBxrefPFAM:PF13460
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1923071..1924252 +
Powered by Drupal