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KJC3_002199-T1, KJC3_002199-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002199-T1
Unique NameKJC3_002199-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1948567..1949855-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002199-T1 ID=KJC3_002199-T1|Name=KJC3_002199-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1289bp|location=Sequence derived from alignment at ch2:1948567..1949855- (Aspergillus niger KJC3)
AAAGTGACATCAGTGATTTCAGGAGAAAGAGGTTATCATACAACGTAAAG
TTTAGCGAATTTCCATATTCAGACATCCGATGCTGACTTTCAACGAGCAT
ACCTTCAAGCCCCTTGAAGTTGCGTTGACTTATATATTGCTATATCCACA
TTGACAAAGACATTGAATACGTTCGATCTTCTCGCTAAGGTTCTATTATC
CCTGCCGAGGAGTCCGAAAATGCTACGCCCAAATGCTATCCTTTTCAGCC
CGATAAGCCGAAATAGGTCAATGTACCCTACAAACATGCATCGCATTTCA
TTGCACAACAGACCAGAAAAGCCCCTTAAATCAACACAGCTGATACTTCT
TGCTGGACAAGCGGGCTTTGCCACCTCAACCCCTTTATCATTCAAGCTGC
AATCGCCACCAACAAAATTGACCCGGATCAAGGAGACAGCTATTGTCTGG
AAACACCCAATGTCAGCCCATCTACCTCTCTTTCACTTTTTTGTGTCCGC
TCTCCTCTAACACTCGGAAAAGCTATACAGAGAAGGAGATTCGAAATATC
ACTGTAGCTCATCGCGAAGCCAAATGCCTTTCTGACAAGATCGCCTTGGG
CTTGGTACGTTTGCTTCGATGGTGCACTGATTTCGTGACTGGGTATCGAA
ATCCCGAAAGGAACAAAGAAATCGCAGACAAGTTTGATATGACTGAGAGA
AAATGGCTTATTCGTTTCATTTTTCTCGAATCGGTTGCTGGGGTGCCTGG
TATGGTGGGCGGCATGCTCCGACATCTGAAGAGTATCAGACGGATGAAGA
GGGATCATGGATGGTCAGTACAAGGGAAAAAAATAATTATCTCCAAGTAC
TTAGCAGTAGCTACACAAGAAGCTGCAGACTGACACAACCGCAGGATCGA
GTCCTTGATTGACGAAGCCTACAACGAGCGCATGCACCTCTTGACATTCC
TCGACCTGGCAGATCCAGGTATCGTCATGCGCTTAGTTGTCTTGGCCGCG
CAGGGCGTCTTCTTCAATGCCTTCTTCGTCTTCTACCTTGTTTCGCCCAA
GACATGTCACCGATTTGTTGGATACCTGGAGGAAGAAGCTGTCATCACCT
ATACACACGCAATCCGTCAACTTCAAGCTGGAAAACTGCCAGCATGGGAC
AATTTATCAGCGCCGGAGATTGTAATCAAATATTGGAGAATGTTGAGGTA
GTAACCCTGTAGGCTCAGTCACGTGGCTGCGCTCAGGCCGTCCACCAAGC
GTCTCTTCGCGCTGGTTGCGCTGTGTGTTTCTAGATAGT
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Coding sequence (CDS) from alignment at ch2:1948567..1949855-

>KJC3_002199-T1 ID=KJC3_002199-T1|Name=KJC3_002199-T1|organism=Aspergillus niger KJC3|type=CDS|length=2520bp|location=Sequence derived from alignment at ch2:1948567..1949855- (Aspergillus niger KJC3)
GATCGAGTCCTTGATTGACGAAGCCTACAACGAGCGCATGCACCTCTTGA
CATTCCTCGACCTGGCAGATCCAGGTATCGTCATGCGCTTAGTTGTCTTG
GCCGCGCAGGGCGTCTTCTTCAATGCCTTCTTCGTCTTCTACCTTGTTTC
GCCCAAGACATGTCACCGATTTGTTGGATACCTGGAGGAAGAAGCTGTCA
TCACCTATACACACGCAATCCGTCAACTTCAAGCTGGAAAACTGCCAGCA
TGGGACAATTTATCAGCGCCGGAGATTGTAATCAAATATTGGAGAATGTT
GAGGTAGCTATACAGAGAAGGAGATTCGAAATATCACTGTAGCTCATCGC
GAAGCCAAATGCCTTTCTGACAAGATCGCCTTGGGCTTGGTACGTTTGCT
TCGATGGTGCACTGATTTCGTGACTGGGTATCGAAATCCCGAAAGGAACA
AAGAAATCGCAGACAAGTTTGATATGACTGAGAGAAAATGGCTTATTCGT
TTCATTTTTCTCGAATCGGTTGCTGGGGTGCCTGGTATGGTGGGCGGCAT
GCTCCGACATCTGAAGAGTATCAGACGGATGAAGAGGGATCATGGATGAT
GCTACGCCCAAATGCTATCCTTTTCAGCCCGATAAGCCGAAATAGGTCAA
TGTACCCTACAAACATGCATCGCATTTCATTGCACAACAGACCAGAAAAG
CCCCTTAAATCAACACAGCTGATACTTCTTGCTGGACAAGCGGGCTTTGC
CACCTCAACCCCTTTATCATTCAAGCTGCAATCGCCACCAACAAAATTGA
CCCGGATCAAGGAGACAGCTATTGTCTGGAAACACCCAATGATCGAGTCC
TTGATTGACGAAGCCTACAACGAGCGCATGCACCTCTTGACATTCCTCGA
CCTGGCAGATCCAGGTATCGTCATGCGCTTAGTTGTCTTGGCCGCGCAGG
GCGTCTTCTTCAATGCCTTCTTCGTCTTCTACCTTGTTTCGCCCAAGACA
TGTCACCGATTTGTTGGATACCTGGAGGAAGAAGCTGTCATCACCTATAC
ACACGCAATCCGTCAACTTCAAGCTGGAAAACTGCCAGCATGGGACAATT
TATCAGCGCCGGAGATTGTAATCAAATATTGGAGAATGTTGAGGTAGCTA
TACAGAGAAGGAGATTCGAAATATCACTGTAGCTCATCGCGAAGCCAAAT
GCCTTTCTGACAAGATCGCCTTGGGCTTGGTACGTTTGCTTCGATGGTGC
ACTGATTTCGTGACTGGGTATCGAAATCCCGAAAGGAACAAAGAAATCGC
AGACAAGTTTGATATGACTGAGAGAAAATGGCTTATTCGTTTCATTTTTC
TCGAATCGGTTGCTGGGGTGCCTGGTATGGTGGGCGGCATGCTCCGACAT
CTGAAGAGTATCAGACGGATGAAGAGGGATCATGGATGATGCTACGCCCA
AATGCTATCCTTTTCAGCCCGATAAGCCGAAATAGGTCAATGTACCCTAC
AAACATGCATCGCATTTCATTGCACAACAGACCAGAAAAGCCCCTTAAAT
CAACACAGCTGATACTTCTTGCTGGACAAGCGGGCTTTGCCACCTCAACC
CCTTTATCATTCAAGCTGCAATCGCCACCAACAAAATTGACCCGGATCAA
GGAGACAGCTATTGTCTGGAAACACCCAATGATCGAGTCCTTGATTGACG
AAGCCTACAACGAGCGCATGCACCTCTTGACATTCCTCGACCTGGCAGAT
CCAGGTATCGTCATGCGCTTAGTTGTCTTGGCCGCGCAGGGCGTCTTCTT
CAATGCCTTCTTCGTCTTCTACCTTGTTTCGCCCAAGACATGTCACCGAT
TTGTTGGATACCTGGAGGAAGAAGCTGTCATCACCTATACACACGCAATC
CGTCAACTTCAAGCTGGAAAACTGCCAGCATGGGACAATTTATCAGCGCC
GGAGATTGTAATCAAATATTGGAGAATGTTGAGGTAGCTATACAGAGAAG
GAGATTCGAAATATCACTGTAGCTCATCGCGAAGCCAAATGCCTTTCTGA
CAAGATCGCCTTGGGCTTGGTACGTTTGCTTCGATGGTGCACTGATTTCG
TGACTGGGTATCGAAATCCCGAAAGGAACAAAGAAATCGCAGACAAGTTT
GATATGACTGAGAGAAAATGGCTTATTCGTTTCATTTTTCTCGAATCGGT
TGCTGGGGTGCCTGGTATGGTGGGCGGCATGCTCCGACATCTGAAGAGTA
TCAGACGGATGAAGAGGGATCATGGATGATGCTACGCCCAAATGCTATCC
TTTTCAGCCCGATAAGCCGAAATAGGTCAATGTACCCTACAAACATGCAT
CGCATTTCATTGCACAACAGACCAGAAAAGCCCCTTAAATCAACACAGCT
GATACTTCTTGCTGGACAAGCGGGCTTTGCCACCTCAACCCCTTTATCAT
TCAAGCTGCAATCGCCACCAACAAAATTGACCCGGATCAAGGAGACAGCT
ATTGTCTGGAAACACCCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0009916alternative oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AOX1_1KJC3_002199Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002199-T1KJC3_002199-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002199-T1.cdsKJC3_002199-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002199-T1.utr3p1KJC3_002199-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002199-T1.exon4KJC3_002199-T1.exon4Aspergillus niger KJC3exon
KJC3_002199-T1.exon3KJC3_002199-T1.exon3Aspergillus niger KJC3exon
KJC3_002199-T1.exon2KJC3_002199-T1.exon2Aspergillus niger KJC3exon
KJC3_002199-T1.exon1KJC3_002199-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002199-T1.utr5p2KJC3_002199-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002199-T1.utr5p1KJC3_002199-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038659
DBxrefInterPro:IPR002680
DBxrefPFAM:PF01786
Product mitochondrial precursor
ProductAlternative oxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1948567..1949855 -
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