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KJC3_002201-T1, KJC3_002201-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002201-T1
Unique NameKJC3_002201-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1953121..1954995+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002201-T1 ID=KJC3_002201-T1|Name=KJC3_002201-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1875bp|location=Sequence derived from alignment at ch2:1953121..1954995+ (Aspergillus niger KJC3)
ATGCATTCATCATGGACACCGCCTCCTATCGGCTCCAGGCCTCTTGCACT
CCTCGGTGCGGGTGTTTTGGGCCGTCGAATCGCCTGTGTCTTTGCCGCAG
CAGGATACAACGTCAATTTATACGACCCGTCTCTCAGCGCACAACAGGCC
GCGCTGGACTACGTCACGCAAAATCTGAAAACGTATTCGAAGTTTTCCAA
AGGGAACCGCCGCTTCGGCCACTGTCGCGCGTTCTCCGACCTTGAAAGCA
CTGTGAGCGACGCCTGGTTGGTCATTGAAGCAGTTCCCGAACATCTACAA
ATGAAGATTGATGTCATGGGCGAGCTCGACAAGTTAGCGCCGGTGGATTG
TATCTTGGCCTCCAACTCCTCGTCGTTCAAGTCGCGATTCATGCTCGAGA
AAGTTGGTGGGCACAGACGGCCGTTGGTCTGCAATATGCATTTTTATATG
CCACCAGAAAAGCGGGTTGTCGAGTTGATGACTGACGGAGAAACCTGGCC
TGAGGTCTTTCCATTTCTGACAAGAGTCCTGGAGGATGTTGGCATGGTTC
CGGTAACTGCTCGCCGAGAGTCCACTGGGTGAGTCGCTATTGACCCAGAT
TAAACCCTCTCCCCCTCTTCTCCGCAGGATGCGAGGCTAATAGGAGCCAA
CAGTTTCGTTTTCAATCGCCTCTGGGCAGCCATTAAGCGCGAAGTTATAA
CCATCTTGGCCGAAGAAGTCTCCGAACCGAAAGAGATCGACAAGATCTGG
GTTGAGATGTTTCACAATGCGGCTGGGCCTTGTACCTTTATGGATCAGGT
TGGCCTGGATACTGTTGCATTCATTGAAGACCATTATATCGAGGAGCGCC
AATTAGGTTCTACGTTGGCCGTTGACTGGCTACGCAAAAACTATGTCAAT
CAAGGGAAACTGGGCAATAAAAGTGACAAGGGCGGCCTCTATCCTCCTCG
ACCTGCATTTAATTCTTCGAATCTGCCCACAGTCTACTTCCTCGATATTG
GACTGGGTTCAATTGTACAGGATCTTTCGGCACTTGGAAAGTCGGGTCGC
ATCCTCCGACGAACCAGTGATGGAGAGTGCGAAACACTCATCACCAACTT
GAACTGTCCTGACGGGATTGACTATTCGCCCTCTGTTGGCCGCATTTTCT
GGACAAACATGGGAATGAGACCGGCCGCAAACGATGGCTCCGTCATGTCT
GCCAACTTGGACGGCAGCGACGTACAGGTCGTGCTACCAGAAGGCGCCGT
GCATACACCCAAGCAACTTGTTGTGGACGACACGAACCAAAAGCTTTACT
TCTGCGATAGGGAGGGAATGCGTATCCACCGGTGCGACTTCGATGGTCAA
AACCATGAAATTTTGGTGTGCAGGGGTGATTTTGGTACCGAAGACCAGAA
TGACCAAACCCGTTGGTGTGTTGGAATTACCATTGATGAAACGCGCGGCA
AAATTTATTGGTCTCAGAAGGGTCCCTCTAAGTCGAATCAGGGACGCATT
TTCCGTGCAAATATCAAGATGCCTGCTGGTGAGACGGCTACCAACCGAAC
AGATATTGAATCTCTTCTTGAGGGGTTGCCTGAACCGATCGACCTCGAAA
TCGACACAGAGACTGAGACGCTCTATTGGACTGACCGCGGGGAGCACCCG
TATGGCAACACATTGAACCAGGCATCCGTTGGCGCGGGGAAACCTCATCG
AAAGATATTGGCCCGTCATTTTAACGAGCTTATCGGGATGAAGGTTGACT
GGGCAAACCGGCAAATTTACCTCAGTGACTTGGGAGGATCTCTATATAGG
GTTGATATGGATGGGTCCAACAAGACTGTCCTCCATAGCGACGAGGGTAG
CTACTCTGGTATCACTTTGGTTTGA
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Coding sequence (CDS) from alignment at ch2:1953121..1954995+

>KJC3_002201-T1 ID=KJC3_002201-T1|Name=KJC3_002201-T1|organism=Aspergillus niger KJC3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch2:1953121..1954995+ (Aspergillus niger KJC3)
ATGCATTCATCATGGACACCGCCTCCTATCGGCTCCAGGCCTCTTGCACT
CCTCGGTGCGGGTGTTTTGGGCCGTCGAATCGCCTGTGTCTTTGCCGCAG
CAGGATACAACGTCAATTTATACGACCCGTCTCTCAGCGCACAACAGGCC
GCGCTGGACTACGTCACGCAAAATCTGAAAACGTATTCGAAGTTTTCCAA
AGGGAACCGCCGCTTCGGCCACTGTCGCGCGTTCTCCGACCTTGAAAGCA
CTGTGAGCGACGCCTGGTTGGTCATTGAAGCAGTTCCCGAACATCTACAA
ATGAAGATTGATGTCATGGGCGAGCTCGACAAGTTAGCGCCGGTGGATTG
TATCTTGGCCTCCAACTCCTCGTCGTTCAAGTCGCGATTCATGCTCGAGA
AAGTTGGTGGGCACAGACGGCCGTTGGTCTGCAATATGCATTTTTATATG
CCACCAGAAAAGCGGGTTGTCGAGTTGATGACTGACGGAGAAACCTGGCC
TGAGGTCTTTCCATTTCTGACAAGAGTCCTGGAGGATGTTGGCATGGTTC
CGGTAACTGCTCGCCGAGAGTCCACTGGTTTCGTTTTCAATCGCCTCTGG
GCAGCCATTAAGCGCGAAGTTATAACCATCTTGGCCGAAGAAGTCTCCGA
ACCGAAAGAGATCGACAAGATCTGGGTTGAGATGTTTCACAATGCGGCTG
GGCCTTGTACCTTTATGGATCAGGTTGGCCTGGATACTGTTGCATTCATT
GAAGACCATTATATCGAGGAGCGCCAATTAGGTTCTACGTTGGCCGTTGA
CTGGCTACGCAAAAACTATGTCAATCAAGGGAAACTGGGCAATAAAAGTG
ACAAGGGCGGCCTCTATCCTCCTCGACCTGCATTTAATTCTTCGAATCTG
CCCACAGTCTACTTCCTCGATATTGGACTGGGTTCAATTGTACAGGATCT
TTCGGCACTTGGAAAGTCGGGTCGCATCCTCCGACGAACCAGTGATGGAG
AGTGCGAAACACTCATCACCAACTTGAACTGTCCTGACGGGATTGACTAT
TCGCCCTCTGTTGGCCGCATTTTCTGGACAAACATGGGAATGAGACCGGC
CGCAAACGATGGCTCCGTCATGTCTGCCAACTTGGACGGCAGCGACGTAC
AGGTCGTGCTACCAGAAGGCGCCGTGCATACACCCAAGCAACTTGTTGTG
GACGACACGAACCAAAAGCTTTACTTCTGCGATAGGGAGGGAATGCGTAT
CCACCGGTGCGACTTCGATGGTCAAAACCATGAAATTTTGGTGTGCAGGG
GTGATTTTGGTACCGAAGACCAGAATGACCAAACCCGTTGGTGTGTTGGA
ATTACCATTGATGAAACGCGCGGCAAAATTTATTGGTCTCAGAAGGGTCC
CTCTAAGTCGAATCAGGGACGCATTTTCCGTGCAAATATCAAGATGCCTG
CTGGTGAGACGGCTACCAACCGAACAGATATTGAATCTCTTCTTGAGGGG
TTGCCTGAACCGATCGACCTCGAAATCGACACAGAGACTGAGACGCTCTA
TTGGACTGACCGCGGGGAGCACCCGTATGGCAACACATTGAACCAGGCAT
CCGTTGGCGCGGGGAAACCTCATCGAAAGATATTGGCCCGTCATTTTAAC
GAGCTTATCGGGATGAAGGTTGACTGGGCAAACCGGCAAATTTACCTCAG
TGACTTGGGAGGATCTCTATATAGGGTTGATATGGATGGGTCCAACAAGA
CTGTCCTCCATAGCGACGAGGGTAGCTACTCTGGTATCACTTTGGTTTGA
ATGCATTCATCATGGACACCGCCTCCTATCGGCTCCAGGCCTCTTGCACT
CCTCGGTGCGGGTGTTTTGGGCCGTCGAATCGCCTGTGTCTTTGCCGCAG
CAGGATACAACGTCAATTTATACGACCCGTCTCTCAGCGCACAACAGGCC
GCGCTGGACTACGTCACGCAAAATCTGAAAACGTATTCGAAGTTTTCCAA
AGGGAACCGCCGCTTCGGCCACTGTCGCGCGTTCTCCGACCTTGAAAGCA
CTGTGAGCGACGCCTGGTTGGTCATTGAAGCAGTTCCCGAACATCTACAA
ATGAAGATTGATGTCATGGGCGAGCTCGACAAGTTAGCGCCGGTGGATTG
TATCTTGGCCTCCAACTCCTCGTCGTTCAAGTCGCGATTCATGCTCGAGA
AAGTTGGTGGGCACAGACGGCCGTTGGTCTGCAATATGCATTTTTATATG
CCACCAGAAAAGCGGGTTGTCGAGTTGATGACTGACGGAGAAACCTGGCC
TGAGGTCTTTCCATTTCTGACAAGAGTCCTGGAGGATGTTGGCATGGTTC
CGGTAACTGCTCGCCGAGAGTCCACTGGTTTCGTTTTCAATCGCCTCTGG
GCAGCCATTAAGCGCGAAGTTATAACCATCTTGGCCGAAGAAGTCTCCGA
ACCGAAAGAGATCGACAAGATCTGGGTTGAGATGTTTCACAATGCGGCTG
GGCCTTGTACCTTTATGGATCAGGTTGGCCTGGATACTGTTGCATTCATT
GAAGACCATTATATCGAGGAGCGCCAATTAGGTTCTACGTTGGCCGTTGA
CTGGCTACGCAAAAACTATGTCAATCAAGGGAAACTGGGCAATAAAAGTG
ACAAGGGCGGCCTCTATCCTCCTCGACCTGCATTTAATTCTTCGAATCTG
CCCACAGTCTACTTCCTCGATATTGGACTGGGTTCAATTGTACAGGATCT
TTCGGCACTTGGAAAGTCGGGTCGCATCCTCCGACGAACCAGTGATGGAG
AGTGCGAAACACTCATCACCAACTTGAACTGTCCTGACGGGATTGACTAT
TCGCCCTCTGTTGGCCGCATTTTCTGGACAAACATGGGAATGAGACCGGC
CGCAAACGATGGCTCCGTCATGTCTGCCAACTTGGACGGCAGCGACGTAC
AGGTCGTGCTACCAGAAGGCGCCGTGCATACACCCAAGCAACTTGTTGTG
GACGACACGAACCAAAAGCTTTACTTCTGCGATAGGGAGGGAATGCGTAT
CCACCGGTGCGACTTCGATGGTCAAAACCATGAAATTTTGGTGTGCAGGG
GTGATTTTGGTACCGAAGACCAGAATGACCAAACCCGTTGGTGTGTTGGA
ATTACCATTGATGAAACGCGCGGCAAAATTTATTGGTCTCAGAAGGGTCC
CTCTAAGTCGAATCAGGGACGCATTTTCCGTGCAAATATCAAGATGCCTG
CTGGTGAGACGGCTACCAACCGAACAGATATTGAATCTCTTCTTGAGGGG
TTGCCTGAACCGATCGACCTCGAAATCGACACAGAGACTGAGACGCTCTA
TTGGACTGACCGCGGGGAGCACCCGTATGGCAACACATTGAACCAGGCAT
CCGTTGGCGCGGGGAAACCTCATCGAAAGATATTGGCCCGTCATTTTAAC
GAGCTTATCGGGATGAAGGTTGACTGGGCAAACCGGCAAATTTACCTCAG
TGACTTGGGAGGATCTCTATATAGGGTTGATATGGATGGGTCCAACAAGA
CTGTCCTCCATAGCGACGAGGGTAGCTACTCTGGTATCACTTTGGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002201KJC3_002201Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002201-T1.exon1KJC3_002201-T1.exon1Aspergillus niger KJC3exon
KJC3_002201-T1.exon2KJC3_002201-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002201-T1.cdsKJC3_002201-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002201-T1KJC3_002201-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR006176
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR011042
DBxrefInterPro:IPR000033
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1953121..1954995 +
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