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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1956152..1957092- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002202-T1 ID=KJC3_002202-T1|Name=KJC3_002202-T1|organism=Aspergillus niger KJC3|type=mRNA|length=941bp|location=Sequence derived from alignment at ch2:1956152..1957092- (Aspergillus niger KJC3)
AGCAGCTGCTGTGATCATGGGAGGCCGAACTATGGCTGCAAAATCTGACA
ACACAAACTCCAATTTTCCTCTTGCAGGGAGCGCCAGTGATGGCTGGTCG
ACGGAGGAAGAGACAACTGCTACATACTACTGTGGAGCTGTGCAATTGGC
ATTTGTAAGTGCTCCCCAACATGGGCAGGCCAAAGCTTTTCACCTAGAAA
ATCGTCCTTAACTATCTCTTGCTAATGCCATGCGCAACCCTCAGCCAGCG
CAAGCTCCTGGTCTTGTTGATACATTCATCTGCAACTGCACAGATTACCA
CAAAATCACTGCATCCATGTTCGCGACCAACTTTGTTATCAAAGACACGT
ATTTAAAACACTTGCGTGGCAAAGAAATGCTCACCATCTATTGCCAGCCG
AAGACCACTATCACTGGCAAGGCAATGACCAACTTCTTCTGTTCTGTGTG
TGGCTCGCTTATGTATCGCACGAGTGAGGTGTTCCCAGGACACAGCATTT
TGCGTACTGGAACGGTTGATGATTTTAGTCTGCATGAGACGAAATTGAGG
CCAAGGGTGGAGATATTTACCAAGGACCACCCGAGTTGGCTCTGCAGTGC
AAATGGTGTTGGACAGTTTAAGGCAGCACCTCCGACGCTTAGGAATACCC
CCATTCCAAATCCCTGAATTGGAATGCTACAGACGCTATATGTACCCCTT
CTGTTATGTACATAAAGTAACATTTCACATCTGGCTCTCTTATACAGCAT
AAAAAAAGATTGTTCTGCGCTCCAATTCGGTCCATGCTGACATGAGCGGG
AGGTGCGCGTGAGGGTTGACAAAAGTCGAGAGGTCTAGCTTTCAGCTCTC
AGATATTAGATTCTTGGCGACTGCGTCCTGCTCCCTATTAAATACTCACC
CCTTGATCGGAAAATCAAACCTGCCTGCGCAATTACCTAAC back to topCoding sequence (CDS) from alignment at ch2:1956152..1957092- >KJC3_002202-T1 ID=KJC3_002202-T1|Name=KJC3_002202-T1|organism=Aspergillus niger KJC3|type=CDS|length=1122bp|location=Sequence derived from alignment at ch2:1956152..1957092- (Aspergillus niger KJC3)
CCAGCGCAAGCTCCTGGTCTTGTTGATACATTCATCTGCAACTGCACAGA
TTACCACAAAATCACTGCATCCATGTTCGCGACCAACTTTGTTATCAAAG
ACACGTATTTAAAACACTTGCGTGGCAAAGAAATGCTCACCATCTATTGC
CAGCCGAAGACCACTATCACTGGCAAGGCAATGACCAACTTCTTCTGTTC
TGTGTGTGGCTCGCTTATGTATCGCACGAGTGAGGTGTTCCCAGGACACA
GCATTTTGCGTACTGGAACGGTTGATGATTTTAGTCTGCATGAGACGAAA
TTGAGGCCAAGGGTGGAGATATTTACCAAGGACCACCCGAGTTGGCTCTG
CAGTGCAAATGGTGTTGGACAGTTTAAGGCAGCACCTCCGACGCTTAGGA
ATACCCCCATTCCAAATCCCTGAATGGGAGGCCGAACTATGGCTGCAAAA
TCTGACAACACAAACTCCAATTTTCCTCTTGCAGGGAGCGCCAGTGATGG
CTGGTCGACGGAGGAAGAGACAACTGCTACATACTACTGTGGAGCTGTGC
AATTGGCATTTCCAGCGCAAGCTCCTGGTCTTGTTGATACATTCATCTGC
AACTGCACAGATTACCACAAAATCACTGCATCCATGTTCGCGACCAACTT
TGTTATCAAAGACACGTATTTAAAACACTTGCGTGGCAAAGAAATGCTCA
CCATCTATTGCCAGCCGAAGACCACTATCACTGGCAAGGCAATGACCAAC
TTCTTCTGTTCTGTGTGTGGCTCGCTTATGTATCGCACGAGTGAGGTGTT
CCCAGGACACAGCATTTTGCGTACTGGAACGGTTGATGATTTTAGTCTGC
ATGAGACGAAATTGAGGCCAAGGGTGGAGATATTTACCAAGGACCACCCG
AGTTGGCTCTGCAGTGCAAATGGTGTTGGACAGTTTAAGGCAGCACCTCC
GACGCTTAGGAATACCCCCATTCCAAATCCCTGAATGGGAGGCCGAACTA
TGGCTGCAAAATCTGACAACACAAACTCCAATTTTCCTCTTGCAGGGAGC
GCCAGTGATGGCTGGTCGACGGAGGAAGAGACAACTGCTACATACTACTG
TGGAGCTGTGCAATTGGCATTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016846 | carbon-sulfur lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002202-T1.utr3p1 | KJC3_002202-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002202-T1.utr5p1 | KJC3_002202-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011057 |
| DBxref | InterPro:IPR006913 |
| DBxref | PFAM:PF04828 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1956152..1957092 - |
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