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KJC3_002204-T1, KJC3_002204-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002204-T1
Unique NameKJC3_002204-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1960512..1962225+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002204-T1 ID=KJC3_002204-T1|Name=KJC3_002204-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1714bp|location=Sequence derived from alignment at ch2:1960512..1962225+ (Aspergillus niger KJC3)
GTGCCACTGAATATTCGATAGAGTGGCGTGACTGTTTAGAATACAGAAGC
AACACCTAACATGGAGCGGGCCGCCGTCGCAGACAACAAAGAGTCTGTTC
TCTGTTTCGATGGCACCGGATATAAATTCCGCGGAGACGAAGCGGACAGT
AATATCCTCAAGATCTACAGAGTGAGTGGTTAGAACATGAATCAATTTCT
TCAGGCTACTCTTACACTGATGAAAGATGCTGAACCGCAATGACCCTCGC
CAATTTCATTATTATCAGCCGGGGTTTGGGACGCATACCACCTCGATCTG
GCAGGTCAGTAATGCCGGCCAGAATCGACTAAAGAGATGGTTTTCGAATA
TGAAGGACTCTGCAACAGGCACAACATTTGACGAACATGTCATGGACGGC
TATAGGTTCCTTATGCGCTTTTACAGCCCCGGAGATGACATATACATTTT
TGGTTTTAGCCGTGGCGCGTATGTTGCTCGCATGCTTGCGGAAATGGTAG
ACCACGTTGGTTTGCTAGAGCCAGGAAATGAAGGGAAAGTACGCTACGTC
TGGACGACCTTCTCGAAGTGGGCAAAATGTACCAACAGCGTCGACGCTGG
CCAGACAGAAAAGGATGACTTATATAAGTACATGAAAGCCCTACGAGAGA
CCTTCTGTCGTCCGGTATCGCAGATTCGGTTCCTCGGACTATTTGACACC
GTCAACAGCATCCCACGATTTGAAGTAAATCGCAATAAATTTCTGTTTCC
TTTTACGGCAAAAACCTCGGCCAGGGTAATTCGGCATGCCGTTTCTATCG
ATGAGCATCGTGCCAAGTTTCGACAGGATTTAATCTCAGATGCCAACCCT
AACAGGCGATCGACGCGGCGCAAGATGCCGGATCATCCAGAGCAGCAAGG
GCGTTGCACAGGAGAGGCGTTCTATCGACCAGCCCCTGTTGCTCACCCAC
AAAAAATGGAAGCAGACCCCCAAAACCCGGCTAGTACGCTCCCCGAAGCT
AAGGATGGTCTCCTGGACGTAAACAAAAGCCCGTCTCAAGAAATCGAGGA
GGTGTGGTTCGCCGGATGTCATTCGGATATTGGCGGCGGATTAAAGTTGG
ATGATGATGAAGACCTAGCACTGAGCCATGTGCCATTAGTGTGGATGGTA
CAGGAGGCGCGGCGTGCGGGGCTTCGATTTGATCACGAAAAGATGAAGCT
CTTTCATTGCTTTGATGATTCAGTTGGCTATAGTGATCTTCCGGGTCATC
TGGAGCCAACCACCGGAGGCCAAACGAATGGAGATTACAGAGGTGATCCA
GGGAACGAATCCAGCTTTAAATCCGCACTCCGAAGGGCATCTACGACCGG
ACATGTACATGACTTCTTACAGTATGACCACGGTGTCTCGTGGCCCACCG
TTGTAACGTGGAAAGTAGCGGAGTATCTTCCGTTTCGGAGATTGGCATTG
CAACCCGATGGATCCTGGAAACCCACTCGGTGGCCTCTTCCCCTTGGGGA
GAGACGTGACCTTCCAAAGGAGGCTAAAGTTCACGGGTCAGTTATTCGCC
GTATAAAGACCAATCAAGATTACAGGCCGGAAAATCTACTCAGAGATGGT
AAGGGGAAGAATAAGCGACCCTTAGAGTATGGGATTGGCGCTTGGGAAGT
GCACGCCCATGAAGGCTGTCCAGTACGAGAAATATACCGCCGAAAGTCGA
GCGAAACTGTCTAG
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Coding sequence (CDS) from alignment at ch2:1960512..1962225+

>KJC3_002204-T1 ID=KJC3_002204-T1|Name=KJC3_002204-T1|organism=Aspergillus niger KJC3|type=CDS|length=3198bp|location=Sequence derived from alignment at ch2:1960512..1962225+ (Aspergillus niger KJC3)
ATGGAGCGGGCCGCCGTCGCAGACAACAAAGAGTCTGTTCTCTGTTTCGA
TGGCACCGGATATAAATTCCGCGGAGACGAAGCGGACAGTAATATCCTCA
AGATCTACAGAATGCTGAACCGCAATGACCCTCGCCAATTTCATTATTAT
CAGCCGGGGTTTGGGACGCATACCACCTCGATCTGGCAGGTCAGTAATGC
CGGCCAGAATCGACTAAAGAGATGGTTTTCGAATATGAAGGACTCTGCAA
CAGGCACAACATTTGACGAACATGTCATGGACGGCTATAGGTTCCTTATG
CGCTTTTACAGCCCCGGAGATGACATATACATTTTTGGTTTTAGCCGTGG
CGCGTATGTTGCTCGCATGCTTGCGGAAATGGTAGACCACGTTGGTTTGC
TAGAGCCAGGAAATGAAGGGAAAGTACGCTACGTCTGGACGACCTTCTCG
AAGTGGGCAAAATGTACCAACAGCGTCGACGCTGGCCAGACAGAAAAGGA
TGACTTATATAAGTACATGAAAGCCCTACGAGAGACCTTCTGTCGTCCGG
TATCGCAGATTCGGTTCCTCGGACTATTTGACACCGTCAACAGCATCCCA
CGATTTGAAGTAAATCGCAATAAATTTCTGTTTCCTTTTACGGCAAAAAC
CTCGGCCAGGGTAATTCGGCATGCCGTTTCTATCGATGAGCATCGTGCCA
AGTTTCGACAGGATTTAATCTCAGATGCCAACCCTAACAGGCGATCGACG
CGGCGCAAGATGCCGGATCATCCAGAGCAGCAAGGGCGTTGCACAGGAGA
GGCGTTCTATCGACCAGCCCCTGTTGCTCACCCACAAAAAATGGAAGCAG
ACCCCCAAAACCCGGCTAGTACGCTCCCCGAAGCTAAGGATGGTCTCCTG
GACGTAAACAAAAGCCCGTCTCAAGAAATCGAGGAGGTGTGGTTCGCCGG
ATGTCATTCGGATATTGGCGGCGGATTAAAGTTGGATGATGATGAAGACC
TAGCACTGAGCCATGTGCCATTAGTGTGGATGGTACAGGAGGCGCGGCGT
GCGGGGCTTCGATTTGATCACGAAAAGATGAAGCTCTTTCATTGCTTTGA
TGATTCAGTTGGCTATAGTGATCTTCCGGGTCATCTGGAGCCAACCACCG
GAGGCCAAACGAATGGAGATTACAGAGGTGATCCAGGGAACGAATCCAGC
TTTAAATCCGCACTCCGAAGGGCATCTACGACCGGACATGTACATGACTT
CTTACAGTATGACCACGGTGTCTCGTGGCCCACCGTTGTAACGTGGAAAG
TAGCGGAGTATCTTCCGTTTCGGAGATTGGCATTGCAACCCGATGGATCC
TGGAAACCCACTCGGTGGCCTCTTCCCCTTGGGGAGAGACGTGACCTTCC
AAAGGAGGCTAAAGTTCACGGGTCAGTTATTCGCCGTATAAAGACCAATC
AAGATTACAGGCCGGAAAATCTACTCAGAGATGGTAAGGGGAAGAATAAG
CGACCCTTAGAGTATGGGATTGGCGCTTGGGAAGTGCACGCCCATGAAGG
CTGTCCAGTACGAGAAATATACCGCCGAAAGTCGAGCGAAACTGTCTAGA
TGGAGCGGGCCGCCGTCGCAGACAACAAAGAGTCTGTTCTCTGTTTCGAT
GGCACCGGATATAAATTCCGCGGAGACGAAGCGGACAGTAATATCCTCAA
GATCTACAGAATGCTGAACCGCAATGACCCTCGCCAATTTCATTATTATC
AGCCGGGGTTTGGGACGCATACCACCTCGATCTGGCAGGTCAGTAATGCC
GGCCAGAATCGACTAAAGAGATGGTTTTCGAATATGAAGGACTCTGCAAC
AGGCACAACATTTGACGAACATGTCATGGACGGCTATAGGTTCCTTATGC
GCTTTTACAGCCCCGGAGATGACATATACATTTTTGGTTTTAGCCGTGGC
GCGTATGTTGCTCGCATGCTTGCGGAAATGGTAGACCACGTTGGTTTGCT
AGAGCCAGGAAATGAAGGGAAAGTACGCTACGTCTGGACGACCTTCTCGA
AGTGGGCAAAATGTACCAACAGCGTCGACGCTGGCCAGACAGAAAAGGAT
GACTTATATAAGTACATGAAAGCCCTACGAGAGACCTTCTGTCGTCCGGT
ATCGCAGATTCGGTTCCTCGGACTATTTGACACCGTCAACAGCATCCCAC
GATTTGAAGTAAATCGCAATAAATTTCTGTTTCCTTTTACGGCAAAAACC
TCGGCCAGGGTAATTCGGCATGCCGTTTCTATCGATGAGCATCGTGCCAA
GTTTCGACAGGATTTAATCTCAGATGCCAACCCTAACAGGCGATCGACGC
GGCGCAAGATGCCGGATCATCCAGAGCAGCAAGGGCGTTGCACAGGAGAG
GCGTTCTATCGACCAGCCCCTGTTGCTCACCCACAAAAAATGGAAGCAGA
CCCCCAAAACCCGGCTAGTACGCTCCCCGAAGCTAAGGATGGTCTCCTGG
ACGTAAACAAAAGCCCGTCTCAAGAAATCGAGGAGGTGTGGTTCGCCGGA
TGTCATTCGGATATTGGCGGCGGATTAAAGTTGGATGATGATGAAGACCT
AGCACTGAGCCATGTGCCATTAGTGTGGATGGTACAGGAGGCGCGGCGTG
CGGGGCTTCGATTTGATCACGAAAAGATGAAGCTCTTTCATTGCTTTGAT
GATTCAGTTGGCTATAGTGATCTTCCGGGTCATCTGGAGCCAACCACCGG
AGGCCAAACGAATGGAGATTACAGAGGTGATCCAGGGAACGAATCCAGCT
TTAAATCCGCACTCCGAAGGGCATCTACGACCGGACATGTACATGACTTC
TTACAGTATGACCACGGTGTCTCGTGGCCCACCGTTGTAACGTGGAAAGT
AGCGGAGTATCTTCCGTTTCGGAGATTGGCATTGCAACCCGATGGATCCT
GGAAACCCACTCGGTGGCCTCTTCCCCTTGGGGAGAGACGTGACCTTCCA
AAGGAGGCTAAAGTTCACGGGTCAGTTATTCGCCGTATAAAGACCAATCA
AGATTACAGGCCGGAAAATCTACTCAGAGATGGTAAGGGGAAGAATAAGC
GACCCTTAGAGTATGGGATTGGCGCTTGGGAAGTGCACGCCCATGAAGGC
TGTCCAGTACGAGAAATATACCGCCGAAAGTCGAGCGAAACTGTCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002204KJC3_002204Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002204-T1.utr5p1KJC3_002204-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002204-T1.exon1KJC3_002204-T1.exon1Aspergillus niger KJC3exon
KJC3_002204-T1.exon2KJC3_002204-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002204-T1.cdsKJC3_002204-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002204-T1KJC3_002204-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR018712
DBxrefPFAM:PF09994
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1960512..1962225 +
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