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KJC3_002208-T1, KJC3_002208-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002208-T1
Unique NameKJC3_002208-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1970705..1972081+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002208-T1 ID=KJC3_002208-T1|Name=KJC3_002208-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1377bp|location=Sequence derived from alignment at ch2:1970705..1972081+ (Aspergillus niger KJC3)
ATGACGTCCGAGTCATCATCCAGCAGCTCTTCAGAACACACGGGGAATCC
TGTATCCTGTGAAGAGAATGACAATGAAATGGACGAACGAAAATTTCTTA
AGAATTGGACATATTGCATCCGTTCGGATTTTACTTCATTGTCTGGTGTG
CCGGCCACTTGGGAGAACGGCCATCCAAAACACTGGGGTCAGGAAGAAGC
GAAGATCTTTCTCGACGGGGAGGCGACGACCCCTGCCATAAGTCCAGATA
ATCAGATAGTTGCAATAGGAATTGCAAATCAAATTCACTTATTCCGTGTG
AACACTAAGGAGCGAGTCGATGTGTTACACGGACATCCTGGGGAGGTAGT
TACTGTCGCCTTTGCACCCAGCCTAGATAAGGACTCGATCGACAAGCCGG
ATGCCCCACGTTATTTGTTAGCATCACAAAGTGAAGAAGAAGGTGGAGGA
AACGGGTACATCATAGTGTGGGAGCTTGATCAGTATGGCATGAAAATGCC
TTCGTCGAAAGAGGAACAAGAACAACAAATTGCTGCTGCAGACCATCAGA
ACACCGACTTCATGCACTGTTTCCCCGGCGAAATGGGCTCATTCGGGGGG
GCAGTCTTCAGTCCTGACGGTAAAACGATGATATACATCGTCCAAAACGT
TACGATCGACTATTATACGGGGAATTGCCGTTACTCCCCCTGTGTCATTC
TCTGGGATGTGGATAGCCGATTAATTCGACATCGGCTCCAAGGCCACACA
GACATTGTAATCTGGATCGGCATCAGCCCAGATAGCTCCCTTGCTGCTTC
CATATCGTGGGATGGCACCGCGCGAATCTGGGACATTCTCTCCGGCAAAT
CCCTTCATATTATTGGACCCTTGGGCGGCCAACTTTGGTGTGGTGCCTTC
TCCCCAGACTCTAAATATTTGGCTGTCAGCCAGGGAGGTCACGACCTTAT
TCATATTTACAATATCCCCACGGCACAGCCAGTCTCATGTATCGAATTAC
CTACATGGTCGCGCTCCATGGCCTGGAGTCCGGATGGGAGATTTTTGGCC
GGTGGGCTTCAGATCGGTGCACTTTGCCTGTGGGACCCTTACACAGGAAT
GGAGAAACAGAGATGGTCTCTGCACTTCGATGATTTTATGATGCAGGAAT
ACGCAACTATTGGAGGCGTACAGTTTATCGGCGACAAGTTGATCTTCCGG
ATACTTGAGGGAACGGTTGAGGTATATGATTTGGCTACGAATCTCAAGCA
GCAGTTTACACGGGGACCGGACGCTAAGATCAGCAGGTGTCCACGTGGGG
AAATGGTCTGCTCGAGGGATTCCAAGCTGCTTATTATCCCAGATGCTGAT
GGAACCTTACGTTTCTGGGGACTATAA
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Coding sequence (CDS) from alignment at ch2:1970705..1972081+

>KJC3_002208-T1 ID=KJC3_002208-T1|Name=KJC3_002208-T1|organism=Aspergillus niger KJC3|type=CDS|length=1377bp|location=Sequence derived from alignment at ch2:1970705..1972081+ (Aspergillus niger KJC3)
ATGACGTCCGAGTCATCATCCAGCAGCTCTTCAGAACACACGGGGAATCC
TGTATCCTGTGAAGAGAATGACAATGAAATGGACGAACGAAAATTTCTTA
AGAATTGGACATATTGCATCCGTTCGGATTTTACTTCATTGTCTGGTGTG
CCGGCCACTTGGGAGAACGGCCATCCAAAACACTGGGGTCAGGAAGAAGC
GAAGATCTTTCTCGACGGGGAGGCGACGACCCCTGCCATAAGTCCAGATA
ATCAGATAGTTGCAATAGGAATTGCAAATCAAATTCACTTATTCCGTGTG
AACACTAAGGAGCGAGTCGATGTGTTACACGGACATCCTGGGGAGGTAGT
TACTGTCGCCTTTGCACCCAGCCTAGATAAGGACTCGATCGACAAGCCGG
ATGCCCCACGTTATTTGTTAGCATCACAAAGTGAAGAAGAAGGTGGAGGA
AACGGGTACATCATAGTGTGGGAGCTTGATCAGTATGGCATGAAAATGCC
TTCGTCGAAAGAGGAACAAGAACAACAAATTGCTGCTGCAGACCATCAGA
ACACCGACTTCATGCACTGTTTCCCCGGCGAAATGGGCTCATTCGGGGGG
GCAGTCTTCAGTCCTGACGGTAAAACGATGATATACATCGTCCAAAACGT
TACGATCGACTATTATACGGGGAATTGCCGTTACTCCCCCTGTGTCATTC
TCTGGGATGTGGATAGCCGATTAATTCGACATCGGCTCCAAGGCCACACA
GACATTGTAATCTGGATCGGCATCAGCCCAGATAGCTCCCTTGCTGCTTC
CATATCGTGGGATGGCACCGCGCGAATCTGGGACATTCTCTCCGGCAAAT
CCCTTCATATTATTGGACCCTTGGGCGGCCAACTTTGGTGTGGTGCCTTC
TCCCCAGACTCTAAATATTTGGCTGTCAGCCAGGGAGGTCACGACCTTAT
TCATATTTACAATATCCCCACGGCACAGCCAGTCTCATGTATCGAATTAC
CTACATGGTCGCGCTCCATGGCCTGGAGTCCGGATGGGAGATTTTTGGCC
GGTGGGCTTCAGATCGGTGCACTTTGCCTGTGGGACCCTTACACAGGAAT
GGAGAAACAGAGATGGTCTCTGCACTTCGATGATTTTATGATGCAGGAAT
ACGCAACTATTGGAGGCGTACAGTTTATCGGCGACAAGTTGATCTTCCGG
ATACTTGAGGGAACGGTTGAGGTATATGATTTGGCTACGAATCTCAAGCA
GCAGTTTACACGGGGACCGGACGCTAAGATCAGCAGGTGTCCACGTGGGG
AAATGGTCTGCTCGAGGGATTCCAAGCTGCTTATTATCCCAGATGCTGAT
GGAACCTTACGTTTCTGGGGACTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002208KJC3_002208Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002208-T1.exon1KJC3_002208-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002208-T1.cdsKJC3_002208-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002208-T1KJC3_002208-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR011659
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1970705..1972081 +
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