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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2019262..2020356+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002227-T1 ID=KJC3_002227-T1|Name=KJC3_002227-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1095bp|location=Sequence derived from alignment at ch2:2019262..2020356+ (Aspergillus niger KJC3)
ATGCCCGTCAAAGACTACGGAATCTGGAAGGCATTTCCAGCTCACTACGA
GTTCGAGGATCGTTTCGAGGACCCCAAATCCCCCCACCTCTCGCTATACT
ATCATGAGAATAATGCAAAAATGCCACAATTTGACCGTGAATACCGACAC
AAACATAAGGGCAACCCGCCAAATAAGCTAAAACCAAGGGAGATTCCTGG
ATTATTCCGCGCAGCAATCAACATCAAGTCCACAGCCAAGGAGTCCCGGC
TTGCATATTGGGTAAATCATAACATTGTCGAGCACCCCATCGCCGAAAAG
CTATCTAGCTTGGACTTCGGCTTCCACCCAATTGATCAAATCACCGATTT
CGATGGTAAAGGTCTGGACTATATTCGAGGGAACCTCTTCACTACAAAGA
GCGGCCGTGTTCTTCCGCACGACATCCCTGGCACGAATAACGATATAATC
GACGTTCTAGAGCCCGAAGTAAAAAAGGCAATTCATCACAAAGCTACTAT
CTATCTTTTCGGCTCTATGTTCAACACCAGAAACGGAATCCACAACGTCC
ACATGAACCAGGGCAATATCCCGCACTTTGTCAAAGATGACGGTGTATTT
CAGGATGGTGGCCTCCTCATCGAGTACGACGATCACTGGACTGGCGTGTT
CCTTGCATTCGCATCCCAGGCCGCTCACACAGATGACCACAATGGACATG
CTTTTGCAAAACACGTCGTTACTTGGGCAGACATTCTACCCCAAGAGATT
GTTGAGAATTCGGTAACGATCAAGGAGGCACTTGTCAATCCACGAGGCAG
AGATGATCGGTCCGCCAAACAAAAAGAGTTCGTAACCCTTGAAAACCTTA
CAAACCACAGAGTAGCCCTGTCATCATGGAGGGTTCATAATGCTGCTGGT
CAAGTCCAAGCGCTCCCTCAAAATGCAGCTTTGGACTCTCGAGCTATGAA
AAAGTTCGAGATGTCAAACTGCCCTCTTTCTAACAACGGCGATACTATCA
CCCTACTTAATGAAGAGGGACTAAGGGTCGATGGAGTAAGCTATGGGGCT
CGGCAGGGTGCCACACAAGGCCATCCAATAGTTTTTGCTCATTAA back to topCoding sequence (CDS) from alignment at ch2:2019262..2020356+ >KJC3_002227-T1 ID=KJC3_002227-T1|Name=KJC3_002227-T1|organism=Aspergillus niger KJC3|type=CDS|length=1095bp|location=Sequence derived from alignment at ch2:2019262..2020356+ (Aspergillus niger KJC3)
ATGCCCGTCAAAGACTACGGAATCTGGAAGGCATTTCCAGCTCACTACGA
GTTCGAGGATCGTTTCGAGGACCCCAAATCCCCCCACCTCTCGCTATACT
ATCATGAGAATAATGCAAAAATGCCACAATTTGACCGTGAATACCGACAC
AAACATAAGGGCAACCCGCCAAATAAGCTAAAACCAAGGGAGATTCCTGG
ATTATTCCGCGCAGCAATCAACATCAAGTCCACAGCCAAGGAGTCCCGGC
TTGCATATTGGGTAAATCATAACATTGTCGAGCACCCCATCGCCGAAAAG
CTATCTAGCTTGGACTTCGGCTTCCACCCAATTGATCAAATCACCGATTT
CGATGGTAAAGGTCTGGACTATATTCGAGGGAACCTCTTCACTACAAAGA
GCGGCCGTGTTCTTCCGCACGACATCCCTGGCACGAATAACGATATAATC
GACGTTCTAGAGCCCGAAGTAAAAAAGGCAATTCATCACAAAGCTACTAT
CTATCTTTTCGGCTCTATGTTCAACACCAGAAACGGAATCCACAACGTCC
ACATGAACCAGGGCAATATCCCGCACTTTGTCAAAGATGACGGTGTATTT
CAGGATGGTGGCCTCCTCATCGAGTACGACGATCACTGGACTGGCGTGTT
CCTTGCATTCGCATCCCAGGCCGCTCACACAGATGACCACAATGGACATG
CTTTTGCAAAACACGTCGTTACTTGGGCAGACATTCTACCCCAAGAGATT
GTTGAGAATTCGGTAACGATCAAGGAGGCACTTGTCAATCCACGAGGCAG
AGATGATCGGTCCGCCAAACAAAAAGAGTTCGTAACCCTTGAAAACCTTA
CAAACCACAGAGTAGCCCTGTCATCATGGAGGGTTCATAATGCTGCTGGT
CAAGTCCAAGCGCTCCCTCAAAATGCAGCTTTGGACTCTCGAGCTATGAA
AAAGTTCGAGATGTCAAACTGCCCTCTTTCTAACAACGGCGATACTATCA
CCCTACTTAATGAAGAGGGACTAAGGGTCGATGGAGTAAGCTATGGGGCT
CGGCAGGGTGCCACACAAGGCCATCCAATAGTTTTTGCTCATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036415 |
| DBxref | InterPro:IPR001322 |
| DBxref | InterPro:IPR019268 |
| DBxref | PFAM:PF00932 |
| DBxref | PFAM:PF10042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2019262..2020356 + |
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