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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2021338..2022374+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002228-T1 ID=KJC3_002228-T1|Name=KJC3_002228-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1037bp|location=Sequence derived from alignment at ch2:2021338..2022374+ (Aspergillus niger KJC3)
ATGCAGGCTATTCTTTTTCTTTCCACATTTTTTGCGCTGGCATCACAACC
AGTGATTGCGTGGGGCGACGTTGGACACCGAGCTATAGCCTACTTGGCTG
AGAAATACCTTACTGTTGCCGGCTCAAATCTCGTCAACGAGCTTCTCGCC
AACGACAAGAACTATGATATCTCCGACGCCGCAACGTGGGCTGACACCAT
CAAATGGAAACGACCGCTAACTAGACCCTTGCATTATATCAGTACGCTGG
AACTATATCACAAAAGATGATATATATCTAATTTGGCTTCAGATCCAGAT
GATGAACCCCCAAAGTCCTGTTTCGTCTCATACCCCCACGATTGCCCTCC
CGAGGGTTGCATTATCTCACAGATGGCAAACATGGTAGGTTACTGACCTG
GGTTTATCAGCGGCTCCAAAAAGTAACATTGTTACATCAGACTCGTCAAA
TCAATGATCGGCACGCCAATATGACCCAACAGAAAGAAGCCTTGATGTTT
TTGATTCACCTGTTTGGGGACTTACACCAGCCCCTGCACGTCACAGGAGT
CGCCAGAGGTGGGAATGATATTCATGTCTGCTTCGATGGCAAGGATCACT
GTAACAACGACACCAAGAGATGGAATTTACACTCCGTCTGGGATACTGCC
ATTCCACACAAGATTAATGGCATAAAGCACAATCTGAAACACAACCCTGA
AAGGCTGGCATCAGCCAAGTGGGCCGACAGGCTCCACGAAGAGAACAAGC
TGCGGCCAGCAGATACCGAGTGTGCAAATACCCAGGAACCCTTGGAATGC
ATCATGCAGTGGGCGACGGAGTCGAATCAGCTAAATTGTGATTTCGTGAT
GAAAAAGGGGCTTCAGTGGCTTGAGAAGACCGATCTGGGTGTTAAGTACT
ATGAGGTAGCTGCACCTATTGTTGACGATCAAATTTTCAAGGCGGCCGTA
CGTCTCGCCGCTTGGATCAGTGCCCTAGCGGAGGATAGGGAAGAAGCCGA
TAATTCTAGAGGCGTCCACCTTCAAGGTGATCTCTGA back to topCoding sequence (CDS) from alignment at ch2:2021338..2022374+ >KJC3_002228-T1 ID=KJC3_002228-T1|Name=KJC3_002228-T1|organism=Aspergillus niger KJC3|type=CDS|length=2790bp|location=Sequence derived from alignment at ch2:2021338..2022374+ (Aspergillus niger KJC3)
ATGCAGGCTATTCTTTTTCTTTCCACATTTTTTGCGCTGGCATCACAACC
AGTGATTGCGTGGGGCGACGTTGGACACCGAGCTATAGCCTACTTGGCTG
AGAAATACCTTACTGTTGCCGGCTCAAATCTCGTCAACGAGCTTCTCGCC
AACGACAAGAACTATGATATCTCCGACGCCGCAACGTGGGCTGACACCAT
CAAATGGAAACGACCGCTAACTAGACCCTTGCATTATATCAATCCAGATG
ATGAACCCCCAAAGTCCTGTTTCGTCTCATACCCCCACGATTGCCCTCCC
GAGGGTTGCATTATCTCACAGATGGCAAACATGACTCGTCAAATCAATGA
TCGGCACGCCAATATGACCCAACAGAAAGAAGCCTTGATGTTTTTGATTC
ACCTGTTTGGGGACTTACACCAGCCCCTGCACGTCACAGGAGTCGCCAGA
GGTGGGAATGATATTCATGTCTGCTTCGATGGCAAGGATCACTGTAACAA
CGACACCAAGAGATGGAATTTACACTCCGTCTGGGATACTGCCATTCCAC
ACAAGATTAATGGCATAAAGCACAATCTGAAACACAACCCTGAAAGGCTG
GCATCAGCCAAGTGGGCCGACAGGCTCCACGAAGAGAACAAGCTGCGGCC
AGCAGATACCGAGTGTGCAAATACCCAGGAACCCTTGGAATGCATCATGC
AGTGGGCGACGGAGTCGAATCAGCTAAATTGTGATTTCGTGATGAAAAAG
GGGCTTCAGTGGCTTGAGAAGACCGATCTGGGTGTTAAGTACTATGAGGT
AGCTGCACCTATTGTTGACGATCAAATTTTCAAGGCGGCCGTACGTCTCG
CCGCTTGGATCAGTGCCCTAGCGGAGGATAGGGAAGAAGCCGATAATTCT
AGAGGCGTCCACCTTCAAGGTGATCTCTGAATGCAGGCTATTCTTTTTCT
TTCCACATTTTTTGCGCTGGCATCACAACCAGTGATTGCGTGGGGCGACG
TTGGACACCGAGCTATAGCCTACTTGGCTGAGAAATACCTTACTGTTGCC
GGCTCAAATCTCGTCAACGAGCTTCTCGCCAACGACAAGAACTATGATAT
CTCCGACGCCGCAACGTGGGCTGACACCATCAAATGGAAACGACCGCTAA
CTAGACCCTTGCATTATATCAATCCAGATGATGAACCCCCAAAGTCCTGT
TTCGTCTCATACCCCCACGATTGCCCTCCCGAGGGTTGCATTATCTCACA
GATGGCAAACATGACTCGTCAAATCAATGATCGGCACGCCAATATGACCC
AACAGAAAGAAGCCTTGATGTTTTTGATTCACCTGTTTGGGGACTTACAC
CAGCCCCTGCACGTCACAGGAGTCGCCAGAGGTGGGAATGATATTCATGT
CTGCTTCGATGGCAAGGATCACTGTAACAACGACACCAAGAGATGGAATT
TACACTCCGTCTGGGATACTGCCATTCCACACAAGATTAATGGCATAAAG
CACAATCTGAAACACAACCCTGAAAGGCTGGCATCAGCCAAGTGGGCCGA
CAGGCTCCACGAAGAGAACAAGCTGCGGCCAGCAGATACCGAGTGTGCAA
ATACCCAGGAACCCTTGGAATGCATCATGCAGTGGGCGACGGAGTCGAAT
CAGCTAAATTGTGATTTCGTGATGAAAAAGGGGCTTCAGTGGCTTGAGAA
GACCGATCTGGGTGTTAAGTACTATGAGGTAGCTGCACCTATTGTTGACG
ATCAAATTTTCAAGGCGGCCGTACGTCTCGCCGCTTGGATCAGTGCCCTA
GCGGAGGATAGGGAAGAAGCCGATAATTCTAGAGGCGTCCACCTTCAAGG
TGATCTCTGAATGCAGGCTATTCTTTTTCTTTCCACATTTTTTGCGCTGG
CATCACAACCAGTGATTGCGTGGGGCGACGTTGGACACCGAGCTATAGCC
TACTTGGCTGAGAAATACCTTACTGTTGCCGGCTCAAATCTCGTCAACGA
GCTTCTCGCCAACGACAAGAACTATGATATCTCCGACGCCGCAACGTGGG
CTGACACCATCAAATGGAAACGACCGCTAACTAGACCCTTGCATTATATC
AATCCAGATGATGAACCCCCAAAGTCCTGTTTCGTCTCATACCCCCACGA
TTGCCCTCCCGAGGGTTGCATTATCTCACAGATGGCAAACATGACTCGTC
AAATCAATGATCGGCACGCCAATATGACCCAACAGAAAGAAGCCTTGATG
TTTTTGATTCACCTGTTTGGGGACTTACACCAGCCCCTGCACGTCACAGG
AGTCGCCAGAGGTGGGAATGATATTCATGTCTGCTTCGATGGCAAGGATC
ACTGTAACAACGACACCAAGAGATGGAATTTACACTCCGTCTGGGATACT
GCCATTCCACACAAGATTAATGGCATAAAGCACAATCTGAAACACAACCC
TGAAAGGCTGGCATCAGCCAAGTGGGCCGACAGGCTCCACGAAGAGAACA
AGCTGCGGCCAGCAGATACCGAGTGTGCAAATACCCAGGAACCCTTGGAA
TGCATCATGCAGTGGGCGACGGAGTCGAATCAGCTAAATTGTGATTTCGT
GATGAAAAAGGGGCTTCAGTGGCTTGAGAAGACCGATCTGGGTGTTAAGT
ACTATGAGGTAGCTGCACCTATTGTTGACGATCAAATTTTCAAGGCGGCC
GTACGTCTCGCCGCTTGGATCAGTGCCCTAGCGGAGGATAGGGAAGAAGC
CGATAATTCTAGAGGCGTCCACCTTCAAGGTGATCTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006308 | DNA catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016788 | hydrolase activity, acting on ester bonds |
| GO:0003676 | nucleic acid binding |
| GO:0004519 | endonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR008947 |
| DBxref | InterPro:IPR003154 |
| DBxref | PFAM:PF02265 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2021338..2022374 + |
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