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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2042750..2044152+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002237-T1 ID=KJC3_002237-T1|Name=KJC3_002237-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1403bp|location=Sequence derived from alignment at ch2:2042750..2044152+ (Aspergillus niger KJC3)
GCTTCTTTGAATGCCCTGGAGCTTATAATTCGACGCAGTAGTGTGTCAGA
ACCGGATTTCTATCTTAAAGACCCAGCGGTGCCTTCCAGTCCACTCGATA
TGCCTTCCTCTGCAAGTGGCAACAGACATGTCCAGCAGCGTCTTTGGGGA
TCCTCCTCCAGGGACGGACCTGACGGCCAGCCGGCGTGGGGTGAACAATG
CAGCTGTGAGTGTCACATACGTGCTGGCAGCTATTGCCATTGCCCTTCGA
TTTTTCGCCAGATCTCGGGTGCAACAGGCTTCCATTGCTGCCGATGATTG
GATGATAGTTGCTGCTTTGGTATGTGCTTGTGACATATTGCCTCTCCAGA
AGCACCGGATGGCGATGCTGATGATTAGGATGACTGCAGCTGTCCGTAAC
CGCGAATTTCGTCTCCACGATTGTTGGTTCGTTCGCCAGGCCATCACCCG
GCAAAGAGTACTGACCAACTCTATACAGGAGGCTACTATGGCCTCGGGAA
GCATGTATGGGCTATACCCCTGCATGATGTGATCAAGGTCATGCAAATAT
TGTTCGCATACGTCCTCATATACGTCGTCACCGTGCCCTTGATCAAGCTT
TCGGTCATCCTCTTTTACCGCCGCATTTTCGGTATGAACAAGGCGATGTG
GTTCTGCGTCGCATTGACGATCGGCTACTGGGTTTCTTGCACCATCGCCT
TTCTCGTCTGTTGCCGGCCTGTCTCATACTACTGGACGCAGTATGCTGAT
CCGGCTGGCGGCCGCTGCGTCTACAACCTTTATCCATTCTATATCGGAAA
TGCCGCTGCAAATGTGACCACGGACGTGATCATTCTGCTAGCCCCCATGC
CTGTTATCTGGAGGCTTCACATGCGAACCACCCAGAAGGTTCTGGTTTGC
AGCATTTTCCTACTTGGCAGCTTGTATGTTGTGTCGATCGCCCCCCTTTC
CGACCCCATGTTTTATCCTGTCCGGAAACTGATAAAAACATTATTTGTAG
TGTCTGCGTGGCGAGCCTCATCCGAATATATTACATGACGTTTCTTAGCA
GGTCCGTGGATATCACCTGGATCATGGGAAATGTCTTCATCTGGTCCAGT
GTGGAGCCGTGCATCGGAATTGTTTGTGCCTGTCTGCCTACCTTGCAACC
CCTGCTGCGGTACACCATCCAACGGATATTCGGCTCGCGTGTGGGAAGGT
ATCTGGGTAGCTCGGAGAATAAGCTGTCCAGCCACACGAGGAATGCTCCC
GTGAGGAAGCCCAGGGATTGGGACGAGAGTCTGCTTGCAACGCAGACTGT
CCGAGTCGAGATGGACTCTATGCGCAGAGAAGACGAGAGTGACGAGGGCA
GAATCATGATTGAGACCGACTTCCAAGTGATCGAGAGCAAGAGGGCAGTA
TAA back to topCoding sequence (CDS) from alignment at ch2:2042750..2044152+ >KJC3_002237-T1 ID=KJC3_002237-T1|Name=KJC3_002237-T1|organism=Aspergillus niger KJC3|type=CDS|length=4308bp|location=Sequence derived from alignment at ch2:2042750..2044152+ (Aspergillus niger KJC3)
ATGTCCAGCAGCGTCTTTGGGGATCCTCCTCCAGGGACGGACCTGACGGC
CAGCCGGCGTGGGGTGAACAATGCAGCTGTGAGTGTCACATACGTGCTGG
CAGCTATTGCCATTGCCCTTCGATTTTTCGCCAGATCTCGGGTGCAACAG
GCTTCCATTGCTGCCGATGATTGGATGATAGTTGCTGCTTTGCTGTCCGT
AACCGCGAATTTCGTCTCCACGATTGTTGGAGGCTACTATGGCCTCGGGA
AGCATGTATGGGCTATACCCCTGCATGATGTGATCAAGGTCATGCAAATA
TTGTTCGCATACGTCCTCATATACGTCGTCACCGTGCCCTTGATCAAGCT
TTCGGTCATCCTCTTTTACCGCCGCATTTTCGGTATGAACAAGGCGATGT
GGTTCTGCGTCGCATTGACGATCGGCTACTGGGTTTCTTGCACCATCGCC
TTTCTCGTCTGTTGCCGGCCTGTCTCATACTACTGGACGCAGTATGCTGA
TCCGGCTGGCGGCCGCTGCGTCTACAACCTTTATCCATTCTATATCGGAA
ATGCCGCTGCAAATGTGACCACGGACGTGATCATTCTGCTAGCCCCCATG
CCTGTTATCTGGAGGCTTCACATGCGAACCACCCAGAAGGTTCTGGTTTG
CAGCATTTTCCTACTTGGCAGCTTTGTCTGCGTGGCGAGCCTCATCCGAA
TATATTACATGACGTTTCTTAGCAGGTCCGTGGATATCACCTGGATCATG
GGAAATGTCTTCATCTGGTCCAGTGTGGAGCCGTGCATCGGAATTGTTTG
TGCCTGTCTGCCTACCTTGCAACCCCTGCTGCGGTACACCATCCAACGGA
TATTCGGCTCGCGTGTGGGAAGGTATCTGGGTAGCTCGGAGAATAAGCTG
TCCAGCCACACGAGGAATGCTCCCGTGAGGAAGCCCAGGGATTGGGACGA
GAGTCTGCTTGCAACGCAGACTGTCCGAGTCGAGATGGACTCTATGCGCA
GAGAAGACGAGAGTGACGAGGGCAGAATCATGATTGAGACCGACTTCCAA
GTGATCGAGAGCAAGAGGGCAGTATAAATGTCCAGCAGCGTCTTTGGGGA
TCCTCCTCCAGGGACGGACCTGACGGCCAGCCGGCGTGGGGTGAACAATG
CAGCTGTGAGTGTCACATACGTGCTGGCAGCTATTGCCATTGCCCTTCGA
TTTTTCGCCAGATCTCGGGTGCAACAGGCTTCCATTGCTGCCGATGATTG
GATGATAGTTGCTGCTTTGCTGTCCGTAACCGCGAATTTCGTCTCCACGA
TTGTTGGAGGCTACTATGGCCTCGGGAAGCATGTATGGGCTATACCCCTG
CATGATGTGATCAAGGTCATGCAAATATTGTTCGCATACGTCCTCATATA
CGTCGTCACCGTGCCCTTGATCAAGCTTTCGGTCATCCTCTTTTACCGCC
GCATTTTCGGTATGAACAAGGCGATGTGGTTCTGCGTCGCATTGACGATC
GGCTACTGGGTTTCTTGCACCATCGCCTTTCTCGTCTGTTGCCGGCCTGT
CTCATACTACTGGACGCAGTATGCTGATCCGGCTGGCGGCCGCTGCGTCT
ACAACCTTTATCCATTCTATATCGGAAATGCCGCTGCAAATGTGACCACG
GACGTGATCATTCTGCTAGCCCCCATGCCTGTTATCTGGAGGCTTCACAT
GCGAACCACCCAGAAGGTTCTGGTTTGCAGCATTTTCCTACTTGGCAGCT
TTGTCTGCGTGGCGAGCCTCATCCGAATATATTACATGACGTTTCTTAGC
AGGTCCGTGGATATCACCTGGATCATGGGAAATGTCTTCATCTGGTCCAG
TGTGGAGCCGTGCATCGGAATTGTTTGTGCCTGTCTGCCTACCTTGCAAC
CCCTGCTGCGGTACACCATCCAACGGATATTCGGCTCGCGTGTGGGAAGG
TATCTGGGTAGCTCGGAGAATAAGCTGTCCAGCCACACGAGGAATGCTCC
CGTGAGGAAGCCCAGGGATTGGGACGAGAGTCTGCTTGCAACGCAGACTG
TCCGAGTCGAGATGGACTCTATGCGCAGAGAAGACGAGAGTGACGAGGGC
AGAATCATGATTGAGACCGACTTCCAAGTGATCGAGAGCAAGAGGGCAGT
ATAAATGTCCAGCAGCGTCTTTGGGGATCCTCCTCCAGGGACGGACCTGA
CGGCCAGCCGGCGTGGGGTGAACAATGCAGCTGTGAGTGTCACATACGTG
CTGGCAGCTATTGCCATTGCCCTTCGATTTTTCGCCAGATCTCGGGTGCA
ACAGGCTTCCATTGCTGCCGATGATTGGATGATAGTTGCTGCTTTGCTGT
CCGTAACCGCGAATTTCGTCTCCACGATTGTTGGAGGCTACTATGGCCTC
GGGAAGCATGTATGGGCTATACCCCTGCATGATGTGATCAAGGTCATGCA
AATATTGTTCGCATACGTCCTCATATACGTCGTCACCGTGCCCTTGATCA
AGCTTTCGGTCATCCTCTTTTACCGCCGCATTTTCGGTATGAACAAGGCG
ATGTGGTTCTGCGTCGCATTGACGATCGGCTACTGGGTTTCTTGCACCAT
CGCCTTTCTCGTCTGTTGCCGGCCTGTCTCATACTACTGGACGCAGTATG
CTGATCCGGCTGGCGGCCGCTGCGTCTACAACCTTTATCCATTCTATATC
GGAAATGCCGCTGCAAATGTGACCACGGACGTGATCATTCTGCTAGCCCC
CATGCCTGTTATCTGGAGGCTTCACATGCGAACCACCCAGAAGGTTCTGG
TTTGCAGCATTTTCCTACTTGGCAGCTTTGTCTGCGTGGCGAGCCTCATC
CGAATATATTACATGACGTTTCTTAGCAGGTCCGTGGATATCACCTGGAT
CATGGGAAATGTCTTCATCTGGTCCAGTGTGGAGCCGTGCATCGGAATTG
TTTGTGCCTGTCTGCCTACCTTGCAACCCCTGCTGCGGTACACCATCCAA
CGGATATTCGGCTCGCGTGTGGGAAGGTATCTGGGTAGCTCGGAGAATAA
GCTGTCCAGCCACACGAGGAATGCTCCCGTGAGGAAGCCCAGGGATTGGG
ACGAGAGTCTGCTTGCAACGCAGACTGTCCGAGTCGAGATGGACTCTATG
CGCAGAGAAGACGAGAGTGACGAGGGCAGAATCATGATTGAGACCGACTT
CCAAGTGATCGAGAGCAAGAGGGCAGTATAAATGTCCAGCAGCGTCTTTG
GGGATCCTCCTCCAGGGACGGACCTGACGGCCAGCCGGCGTGGGGTGAAC
AATGCAGCTGTGAGTGTCACATACGTGCTGGCAGCTATTGCCATTGCCCT
TCGATTTTTCGCCAGATCTCGGGTGCAACAGGCTTCCATTGCTGCCGATG
ATTGGATGATAGTTGCTGCTTTGCTGTCCGTAACCGCGAATTTCGTCTCC
ACGATTGTTGGAGGCTACTATGGCCTCGGGAAGCATGTATGGGCTATACC
CCTGCATGATGTGATCAAGGTCATGCAAATATTGTTCGCATACGTCCTCA
TATACGTCGTCACCGTGCCCTTGATCAAGCTTTCGGTCATCCTCTTTTAC
CGCCGCATTTTCGGTATGAACAAGGCGATGTGGTTCTGCGTCGCATTGAC
GATCGGCTACTGGGTTTCTTGCACCATCGCCTTTCTCGTCTGTTGCCGGC
CTGTCTCATACTACTGGACGCAGTATGCTGATCCGGCTGGCGGCCGCTGC
GTCTACAACCTTTATCCATTCTATATCGGAAATGCCGCTGCAAATGTGAC
CACGGACGTGATCATTCTGCTAGCCCCCATGCCTGTTATCTGGAGGCTTC
ACATGCGAACCACCCAGAAGGTTCTGGTTTGCAGCATTTTCCTACTTGGC
AGCTTTGTCTGCGTGGCGAGCCTCATCCGAATATATTACATGACGTTTCT
TAGCAGGTCCGTGGATATCACCTGGATCATGGGAAATGTCTTCATCTGGT
CCAGTGTGGAGCCGTGCATCGGAATTGTTTGTGCCTGTCTGCCTACCTTG
CAACCCCTGCTGCGGTACACCATCCAACGGATATTCGGCTCGCGTGTGGG
AAGGTATCTGGGTAGCTCGGAGAATAAGCTGTCCAGCCACACGAGGAATG
CTCCCGTGAGGAAGCCCAGGGATTGGGACGAGAGTCTGCTTGCAACGCAG
ACTGTCCGAGTCGAGATGGACTCTATGCGCAGAGAAGACGAGAGTGACGA
GGGCAGAATCATGATTGAGACCGACTTCCAAGTGATCGAGAGCAAGAGGG
CAGTATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002237-T1.utr5p1 | KJC3_002237-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2042750..2044152 + |
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