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KJC3_002239-T1, KJC3_002239-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002239-T1
Unique NameKJC3_002239-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2047039..2050713+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002239-T1 ID=KJC3_002239-T1|Name=KJC3_002239-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3675bp|location=Sequence derived from alignment at ch2:2047039..2050713+ (Aspergillus niger KJC3)
GGTTTGCACCGGCAGAGCACCTCAGGCTACACTTTTTGCCTTCTGCAGAA
TCCTGTAGCCAATCACCTTCTTCTATTCTGCCGACCGCTCTCAGGGCCAT
CGCCCCCTCTCTCTCTCAGTGTGTCTCCTCCGCGGTGGAAGATTCCATTC
CATCCGCCTCTCTTCTACTAGGCTTGTCTTGTCTTGTTGCATCCACTGCC
TCTCCTCTCACGCCTTCTCTCAACCTTTCCCCCCTCATCCTTTCCTTCCA
ACCCCCGTCAAGAACCAACTCCTCTCCCCCCTCCTACCCGGTGCCACAAT
TTCGTTCCATTCGGCCAGACCCTTAACGACGGGTCTCGCATTCTTTCGCC
CTACTGCATCCCCCTACCTCTCGCCCATCTTGCATCATCCTACTACTCTT
CCCATCCTCCTTTCACTCACCACTCACCAGCCCCTCTCCCCTCCCTCTCG
TCCTCTTGCTCGGCCTGTGATTCGTCCTAGGTCTGCCTCTCCTTAGCCCC
GTTTTGGCTCGTCAGACAGACCTCTTTGCGGCTTGTGCGTCTCGCCTGCC
TTGCGCCTCTCCTTCACGCATTGTCATCCGCAACTTCACCTGTCTCCCGA
ATCTCACTTCTTCCCGCAACGCCCCGTCTCCCCAACACCTCCCGAAGATT
GCCAGCCTCAGATTGCCCCCCACAAACATCCCTAGTTGCAGTTCAAGTTG
ACGTGAAGGTTTTTGGTTGGCTGTCTCGGTCATCGCAAAAATTATATCGT
GCCCCTCTTCTGGTCTCTTCCGGTGTCATTGTACCGGAACCCCTCCTCCT
TGACCCGTCTCTGGGGGCCACCCATCGATACAACGAACGGGCGGGAAGCC
CGGCCTGCATCTCATCGAGTCGATCATTATTTCCAGATCACTTCTGTCGA
GCAGCACTTGACACGCCCCACGGCTTCAACACCTTCCCGCTCTGGTTTCC
ACTGTCGGCTGCGATATTCTGAACACAATGGCCGACTACAACCCCCTCTA
TCAGCACGGTCTTTACCTGTCGCCAGATCAGCAGGATCTTCTTCTGGCTG
CTCTATCCTCCAACAATCCGCCTGCAAAACAGCAGAATAATTCTCATCCC
CCGGCTTCCAAGTCAGACCCAGAGTCTACCCCTGGAACCACAGGTAGTTA
CAATATGAGCCCTGCATTCGACCCCTCTAATCCTCACTCGGGTGGCCTGG
GATATGGCGATGATGAAAGTCCCTTCCTGGACTTCAACCCCGAGCTGGAC
TTTGACTTTCAAGGCTCCGAGAACTTGATCGGTGATATTCCCGACAGCCT
GCCGCAATCGGAAGAACCTGAGCCGGGAGAGAAGCGGAAGGACATCGATG
GCGATGCGGATGAGAATGAAGCTTCTGGTAAGAAGCGAAGAGAAAGCGAT
GAGAAGGCGGCAAAGAAGCCAGGAAGGAAGCCCTTGACTTCCGAGCCAAC
CTCAGTACGTATACTCGGTTATCGCGATGTGGGCGCCGAGGGTATCGTGG
TACTAACAAATTTGCAGAAGCGGAAGGCACAGAACCGAGCTGCGCAGCGA
GCGTTCCGTGAACGCAAGGAGAAACACTTGAAGGATCTGGAAACGAAGGT
AGATGAGCTTCAGAAGGCTTCTGACAACGCGAATCAGGAAAATGGGTTGC
TACGTGCTCAGATTGACCGCCTGCAAGTCGAACTGAGAGAGTACCGCAAG
CGTCTCTCCTGGCTGACCACCGGCACTGGTGTCTCTGCCATGAATGCCAT
CCCAGGGGCCTACCCCAACAGCAAGGGATCGTACGGCCTTCAGAACAACG
ATTTCATGTTTGACTTCCCCAAATTCGGGGATCTTCCGGGCTCCCACATT
TTCAATAATGGCCAATTGTCCAAGACGCAGCAGAGTGCTAAAGGGGAGCC
ATCAACAGCAACCCCGCGTAACGACTCTCGTGTGCCAGGTGTTGTGAGCC
GTAACTCTCTGAGCAGCTCTCAGTCCAACGGTGTACCCGCGGGCAGGACT
CCCAGCTCCGTGTCCCAGCAGGGATCCACTCCTGCGTCCACGAGGAAGTC
CACGCCGAAGGTGTCCATATACAACGGCACGGCGCACTCCACCTCTACGC
ACGACTCCTCTACAACTGACTCGCCATCCTCCTCGTCCGATTCCCACCAG
AGCCAGAGTCTTTCTTCCAACGGCACATCCCCGGAACCGACCATTAATTC
TCCTGCTACTAAGGCCCACCACAATCACGGTGCTCATGATGGCTGCACAT
ATACCACCATCGATGGTGAGGAATCCTTCTGCGCGCAACTTGGCATGGCA
TGTGGCAATATCAATAACCCCATTCCAGCCGTCCGGCATAACAGCCAAAG
CGCGTCAAATACTCCTAGTCAGGAGGCTCCCCACGAGGATGTTGCGGGTC
TGGATATGCTCGCTCAGCAGAACGGAGGCCAGTTCGATCCTGTTCTCTTC
GGAGACTGGCGTGAGCCTCAGGATGCCATCCTGTCTCAGGACTTCGGAAC
ATTCTTTGACGATGCTTTCCCCCTGCCCGATCTGGGAAGCCCTTCACACA
ACCTCACGGAAGCGGCCACCCAACAACCACCGAAGAAGGACTTGATCGCG
GAGATTGACAGCAAGTTGGATGAAGAAGTTGTGCCTGGAGAAGACAAGTC
TCAGATGCTGAGTTGCACGAAGATATGGTATGATCATCCTGTTGTACTTC
CCAATAACCACATTCGTACTGACTTCTTAAAGGGATCGTCTGCAATCAAT
GGAGAGATTCCGCAACGGAGAGCTCGATGTCGATCATCTTTGCTCCGAAC
TACGCATGAAGGCGCGGTGTTCTGAGGGCGGTGTGGTCGTCAACCAGCAA
GACGTTGACGACATCATGGGGCGGGCGAAGTAGTCAAGCGAGGGGAAATA
ACCAGTTAGTTCGCACCTGCGCTGCCCGCCGCATACTGCCCTCGTTGCCA
TCATTCTGCGTTTCAGATACCCATACATGTAATGCAAAGCTGTTGTTGAC
GCCGTTACGACAAAAAGGGACAAATGGATACGGGAGGTTTTTCACACGAA
CGCAAAGTGAAAAATCCACGGAGTACTCCAGGTTATTTACCGCAATCTTC
GGTTGGACATTTTTTTTCTTCTAAAGACTTTTGGAGCAAAGCAATAACCT
CCCCAACACATATTACATCTCTCCATCTACTTATGACTGTACTTTCTCTA
CTATCTTCTTTCTTCTTCTCTCTCCTTCTCTCGAAGACCACTGCAGGCGA
ACAGGAGGCGTGGTTTGCTCGGGGAAAAATTAATGCAATATAGGAAGCTT
CGGGTTGGCAGACTGTACACCATGACCGTTGGAGTCTTCTTTCGTTCATT
CTATCCTACACTTGGGTTGTGTGCTTGTTCCTATGTATATGCACCGCTGG
TTCTTGACCTTTCAGCACACCACATGTATTCAAAAAATCTTGGTGGCTGG
GGACTTCGAGTGATATGTTGCTGTGTCAATTTATCTGTCTACCTACCTAC
CCTTGGAAATATGCGAAAGGGTTCTTCTTGTCTCTTTGGGCGTAATCGGC
GTATTTCTCAGGGTGAGGTTGTATCTCTGTATAGGCATGAAGTAATAATA
CGCCAGTTCTCTCTTCTCCGACAGTCGTACTAGTATAGATATTTCGAACA
TCGAGGTTTATAGCTCTTATATATG
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Coding sequence (CDS) from alignment at ch2:2047039..2050713+

>KJC3_002239-T1 ID=KJC3_002239-T1|Name=KJC3_002239-T1|organism=Aspergillus niger KJC3|type=CDS|length=5364bp|location=Sequence derived from alignment at ch2:2047039..2050713+ (Aspergillus niger KJC3)
ATGGCCGACTACAACCCCCTCTATCAGCACGGTCTTTACCTGTCGCCAGA
TCAGCAGGATCTTCTTCTGGCTGCTCTATCCTCCAACAATCCGCCTGCAA
AACAGCAGAATAATTCTCATCCCCCGGCTTCCAAGTCAGACCCAGAGTCT
ACCCCTGGAACCACAGGTAGTTACAATATGAGCCCTGCATTCGACCCCTC
TAATCCTCACTCGGGTGGCCTGGGATATGGCGATGATGAAAGTCCCTTCC
TGGACTTCAACCCCGAGCTGGACTTTGACTTTCAAGGCTCCGAGAACTTG
ATCGGTGATATTCCCGACAGCCTGCCGCAATCGGAAGAACCTGAGCCGGG
AGAGAAGCGGAAGGACATCGATGGCGATGCGGATGAGAATGAAGCTTCTG
GTAAGAAGCGAAGAGAAAGCGATGAGAAGGCGGCAAAGAAGCCAGGAAGG
AAGCCCTTGACTTCCGAGCCAACCTCAAAGCGGAAGGCACAGAACCGAGC
TGCGCAGCGAGCGTTCCGTGAACGCAAGGAGAAACACTTGAAGGATCTGG
AAACGAAGGTAGATGAGCTTCAGAAGGCTTCTGACAACGCGAATCAGGAA
AATGGGTTGCTACGTGCTCAGATTGACCGCCTGCAAGTCGAACTGAGAGA
GTACCGCAAGCGTCTCTCCTGGCTGACCACCGGCACTGGTGTCTCTGCCA
TGAATGCCATCCCAGGGGCCTACCCCAACAGCAAGGGATCGTACGGCCTT
CAGAACAACGATTTCATGTTTGACTTCCCCAAATTCGGGGATCTTCCGGG
CTCCCACATTTTCAATAATGGCCAATTGTCCAAGACGCAGCAGAGTGCTA
AAGGGGAGCCATCAACAGCAACCCCGCGTAACGACTCTCGTGTGCCAGGT
GTTGTGAGCCGTAACTCTCTGAGCAGCTCTCAGTCCAACGGTGTACCCGC
GGGCAGGACTCCCAGCTCCGTGTCCCAGCAGGGATCCACTCCTGCGTCCA
CGAGGAAGTCCACGCCGAAGGTGTCCATATACAACGGCACGGCGCACTCC
ACCTCTACGCACGACTCCTCTACAACTGACTCGCCATCCTCCTCGTCCGA
TTCCCACCAGAGCCAGAGTCTTTCTTCCAACGGCACATCCCCGGAACCGA
CCATTAATTCTCCTGCTACTAAGGCCCACCACAATCACGGTGCTCATGAT
GGCTGCACATATACCACCATCGATGGTGAGGAATCCTTCTGCGCGCAACT
TGGCATGGCATGTGGCAATATCAATAACCCCATTCCAGCCGTCCGGCATA
ACAGCCAAAGCGCGTCAAATACTCCTAGTCAGGAGGCTCCCCACGAGGAT
GTTGCGGGTCTGGATATGCTCGCTCAGCAGAACGGAGGCCAGTTCGATCC
TGTTCTCTTCGGAGACTGGCGTGAGCCTCAGGATGCCATCCTGTCTCAGG
ACTTCGGAACATTCTTTGACGATGCTTTCCCCCTGCCCGATCTGGGAAGC
CCTTCACACAACCTCACGGAAGCGGCCACCCAACAACCACCGAAGAAGGA
CTTGATCGCGGAGATTGACAGCAAGTTGGATGAAGAAGTTGTGCCTGGAG
AAGACAAGTCTCAGATGCTGAGTTGCACGAAGATATGGGATCGTCTGCAA
TCAATGGAGAGATTCCGCAACGGAGAGCTCGATGTCGATCATCTTTGCTC
CGAACTACGCATGAAGGCGCGGTGTTCTGAGGGCGGTGTGGTCGTCAACC
AGCAAGACGTTGACGACATCATGGGGCGGGCGAAGTAGATGGCCGACTAC
AACCCCCTCTATCAGCACGGTCTTTACCTGTCGCCAGATCAGCAGGATCT
TCTTCTGGCTGCTCTATCCTCCAACAATCCGCCTGCAAAACAGCAGAATA
ATTCTCATCCCCCGGCTTCCAAGTCAGACCCAGAGTCTACCCCTGGAACC
ACAGGTAGTTACAATATGAGCCCTGCATTCGACCCCTCTAATCCTCACTC
GGGTGGCCTGGGATATGGCGATGATGAAAGTCCCTTCCTGGACTTCAACC
CCGAGCTGGACTTTGACTTTCAAGGCTCCGAGAACTTGATCGGTGATATT
CCCGACAGCCTGCCGCAATCGGAAGAACCTGAGCCGGGAGAGAAGCGGAA
GGACATCGATGGCGATGCGGATGAGAATGAAGCTTCTGGTAAGAAGCGAA
GAGAAAGCGATGAGAAGGCGGCAAAGAAGCCAGGAAGGAAGCCCTTGACT
TCCGAGCCAACCTCAAAGCGGAAGGCACAGAACCGAGCTGCGCAGCGAGC
GTTCCGTGAACGCAAGGAGAAACACTTGAAGGATCTGGAAACGAAGGTAG
ATGAGCTTCAGAAGGCTTCTGACAACGCGAATCAGGAAAATGGGTTGCTA
CGTGCTCAGATTGACCGCCTGCAAGTCGAACTGAGAGAGTACCGCAAGCG
TCTCTCCTGGCTGACCACCGGCACTGGTGTCTCTGCCATGAATGCCATCC
CAGGGGCCTACCCCAACAGCAAGGGATCGTACGGCCTTCAGAACAACGAT
TTCATGTTTGACTTCCCCAAATTCGGGGATCTTCCGGGCTCCCACATTTT
CAATAATGGCCAATTGTCCAAGACGCAGCAGAGTGCTAAAGGGGAGCCAT
CAACAGCAACCCCGCGTAACGACTCTCGTGTGCCAGGTGTTGTGAGCCGT
AACTCTCTGAGCAGCTCTCAGTCCAACGGTGTACCCGCGGGCAGGACTCC
CAGCTCCGTGTCCCAGCAGGGATCCACTCCTGCGTCCACGAGGAAGTCCA
CGCCGAAGGTGTCCATATACAACGGCACGGCGCACTCCACCTCTACGCAC
GACTCCTCTACAACTGACTCGCCATCCTCCTCGTCCGATTCCCACCAGAG
CCAGAGTCTTTCTTCCAACGGCACATCCCCGGAACCGACCATTAATTCTC
CTGCTACTAAGGCCCACCACAATCACGGTGCTCATGATGGCTGCACATAT
ACCACCATCGATGGTGAGGAATCCTTCTGCGCGCAACTTGGCATGGCATG
TGGCAATATCAATAACCCCATTCCAGCCGTCCGGCATAACAGCCAAAGCG
CGTCAAATACTCCTAGTCAGGAGGCTCCCCACGAGGATGTTGCGGGTCTG
GATATGCTCGCTCAGCAGAACGGAGGCCAGTTCGATCCTGTTCTCTTCGG
AGACTGGCGTGAGCCTCAGGATGCCATCCTGTCTCAGGACTTCGGAACAT
TCTTTGACGATGCTTTCCCCCTGCCCGATCTGGGAAGCCCTTCACACAAC
CTCACGGAAGCGGCCACCCAACAACCACCGAAGAAGGACTTGATCGCGGA
GATTGACAGCAAGTTGGATGAAGAAGTTGTGCCTGGAGAAGACAAGTCTC
AGATGCTGAGTTGCACGAAGATATGGGATCGTCTGCAATCAATGGAGAGA
TTCCGCAACGGAGAGCTCGATGTCGATCATCTTTGCTCCGAACTACGCAT
GAAGGCGCGGTGTTCTGAGGGCGGTGTGGTCGTCAACCAGCAAGACGTTG
ACGACATCATGGGGCGGGCGAAGTAGATGGCCGACTACAACCCCCTCTAT
CAGCACGGTCTTTACCTGTCGCCAGATCAGCAGGATCTTCTTCTGGCTGC
TCTATCCTCCAACAATCCGCCTGCAAAACAGCAGAATAATTCTCATCCCC
CGGCTTCCAAGTCAGACCCAGAGTCTACCCCTGGAACCACAGGTAGTTAC
AATATGAGCCCTGCATTCGACCCCTCTAATCCTCACTCGGGTGGCCTGGG
ATATGGCGATGATGAAAGTCCCTTCCTGGACTTCAACCCCGAGCTGGACT
TTGACTTTCAAGGCTCCGAGAACTTGATCGGTGATATTCCCGACAGCCTG
CCGCAATCGGAAGAACCTGAGCCGGGAGAGAAGCGGAAGGACATCGATGG
CGATGCGGATGAGAATGAAGCTTCTGGTAAGAAGCGAAGAGAAAGCGATG
AGAAGGCGGCAAAGAAGCCAGGAAGGAAGCCCTTGACTTCCGAGCCAACC
TCAAAGCGGAAGGCACAGAACCGAGCTGCGCAGCGAGCGTTCCGTGAACG
CAAGGAGAAACACTTGAAGGATCTGGAAACGAAGGTAGATGAGCTTCAGA
AGGCTTCTGACAACGCGAATCAGGAAAATGGGTTGCTACGTGCTCAGATT
GACCGCCTGCAAGTCGAACTGAGAGAGTACCGCAAGCGTCTCTCCTGGCT
GACCACCGGCACTGGTGTCTCTGCCATGAATGCCATCCCAGGGGCCTACC
CCAACAGCAAGGGATCGTACGGCCTTCAGAACAACGATTTCATGTTTGAC
TTCCCCAAATTCGGGGATCTTCCGGGCTCCCACATTTTCAATAATGGCCA
ATTGTCCAAGACGCAGCAGAGTGCTAAAGGGGAGCCATCAACAGCAACCC
CGCGTAACGACTCTCGTGTGCCAGGTGTTGTGAGCCGTAACTCTCTGAGC
AGCTCTCAGTCCAACGGTGTACCCGCGGGCAGGACTCCCAGCTCCGTGTC
CCAGCAGGGATCCACTCCTGCGTCCACGAGGAAGTCCACGCCGAAGGTGT
CCATATACAACGGCACGGCGCACTCCACCTCTACGCACGACTCCTCTACA
ACTGACTCGCCATCCTCCTCGTCCGATTCCCACCAGAGCCAGAGTCTTTC
TTCCAACGGCACATCCCCGGAACCGACCATTAATTCTCCTGCTACTAAGG
CCCACCACAATCACGGTGCTCATGATGGCTGCACATATACCACCATCGAT
GGTGAGGAATCCTTCTGCGCGCAACTTGGCATGGCATGTGGCAATATCAA
TAACCCCATTCCAGCCGTCCGGCATAACAGCCAAAGCGCGTCAAATACTC
CTAGTCAGGAGGCTCCCCACGAGGATGTTGCGGGTCTGGATATGCTCGCT
CAGCAGAACGGAGGCCAGTTCGATCCTGTTCTCTTCGGAGACTGGCGTGA
GCCTCAGGATGCCATCCTGTCTCAGGACTTCGGAACATTCTTTGACGATG
CTTTCCCCCTGCCCGATCTGGGAAGCCCTTCACACAACCTCACGGAAGCG
GCCACCCAACAACCACCGAAGAAGGACTTGATCGCGGAGATTGACAGCAA
GTTGGATGAAGAAGTTGTGCCTGGAGAAGACAAGTCTCAGATGCTGAGTT
GCACGAAGATATGGGATCGTCTGCAATCAATGGAGAGATTCCGCAACGGA
GAGCTCGATGTCGATCATCTTTGCTCCGAACTACGCATGAAGGCGCGGTG
TTCTGAGGGCGGTGTGGTCGTCAACCAGCAAGACGTTGACGACATCATGG
GGCGGGCGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002239KJC3_002239Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002239-T1KJC3_002239-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002239-T1.utr5p1KJC3_002239-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002239-T1.exon1KJC3_002239-T1.exon1Aspergillus niger KJC3exon
KJC3_002239-T1.exon2KJC3_002239-T1.exon2Aspergillus niger KJC3exon
KJC3_002239-T1.exon3KJC3_002239-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002239-T1.cdsKJC3_002239-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002239-T1.utr3p1KJC3_002239-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013910
DBxrefInterPro:IPR023167
DBxrefInterPro:IPR004827
DBxrefPFAM:PF08601
DBxrefPFAM:PF00170
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2047039..2050713 +
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