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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2057498..2059002- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002242-T1 ID=KJC3_002242-T1|Name=KJC3_002242-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1505bp|location=Sequence derived from alignment at ch2:2057498..2059002- (Aspergillus niger KJC3)
AATCTCTCTCCGCTCCATTGCATGAACAATGCAGAAGCCCATCAGCGCCC
CCCATATACAGAGGGGAAGAATAGGATTGAGCCTGAACGAGGAAATTTTC
CCCATCAGCACAGCTGGGTCCAAGACAATGTACTCCGAGACCTCCAGGAC
ATATAAGGCCTCTGGATCTCGCCCAGCAGGTTTCATTTCCATTCGCGTTC
AAGAGAAAGACCTTGTGAATAGCTTATCTTGAATTCACAAAGCCAATCTC
ATTCGTCTCCTTTATTTACTCACAGACTTCCATCTCACAATGCCAATTCA
AAAGCTGAAAGTTGGTATGGCTGGTCTGGGCCGGATAGGCAAGGTCCATG
TCCACAACTTCCTTCACCAAACCCCACGGGCCGAAGTTGTCGCCGCCTTC
TCCCCCGACCCTGCCGAGATTACATGGGGTAGACAACACCTAGAGCCTTA
TGGAGTTACATTATATGATAACTATGACAAGATGCTGGAGCACCCCGGCT
TGCAAGCAGTCGTCATCGGGACGGCGACCTCGGTGCATGCCGAGGAGACG
ATGAAAGCTATCGATCGGGACCTGCACGTCCTTTGTGAGAAGCCATTGTC
AATTGATGTGGAAGTGGTATGTTCCGGATATCCTGCTTAATTTGGATCTA
CAGTTGTCGTTTCTCGAAATTGCATATGGACTAACTCCTTAGTAGTGCAG
AGCAGTTGCACAGAAGGCTAAGACCAAGCCACACTTGAAGGTGATGTGTG
GCTTTTCTCGGAGATTCGATGACTCCTATCGCGAGGTTTATGATAAGATT
AGCCAGGGAATGATTGGACGTCCCTCCATCGTGAGAAGCCAGACTTGTGA
CAAATATGACCCCTCGGGCTTCTACGTGGCTTACGCAGCGTGGTCGGGTG
GTGTGTTTGTTGACATGTCGGTCCATGATATCGACCTGACCTTGTGGTTC
ATGGGAGAGGACTCGGTCCCCAAGAGCATCTCCGCCCACGGAATCACGGC
TGTCCAGCCTGAGTTGAAGAAGTACAACGACTACGACAACGCAGTCGGAA
TTGTTGAGTTTCACAATGGCAAAATCGCCTACTACTACTGCTCTCGAATG
ATGCCCCATGGACAAGAAGATACGACGGAAGTTATTGGCACCGAAGGGAA
GCTGTCTGTTAACATCAACCCGCAACGCAACTTCGTCAACTACTACCACA
ACGGCGGCATCACGCGCGAGGTCCCTGCAAATTTCCACGGGCGCTTCGGA
GGTGCCTTTGTGAACGAGGCAAACGAATTCACTGCCTGTTGCTTAGACAA
CAAACCACTACCCCTCAAGCTGTCTAACGCAGTCAAAGCTGTTGAGATTG
GCGCATACCTTCAGGAGGCATTGGTGACAGGGAAGCAGATCCACTTTGAT
GAGATCGGTAGAAGGATTGAGAAGGCTCAGTTGTAGGATGGATTCTATAA
TTCTATATCCGGCCTGCTCCAGGATATTGTAGCATCTTTCAATGTTTGAA
TCTAG back to topCoding sequence (CDS) from alignment at ch2:2057498..2059002- >KJC3_002242-T1 ID=KJC3_002242-T1|Name=KJC3_002242-T1|organism=Aspergillus niger KJC3|type=CDS|length=2136bp|location=Sequence derived from alignment at ch2:2057498..2059002- (Aspergillus niger KJC3)
TGCAGAGCAGTTGCACAGAAGGCTAAGACCAAGCCACACTTGAAGGTGAT
GTGTGGCTTTTCTCGGAGATTCGATGACTCCTATCGCGAGGTTTATGATA
AGATTAGCCAGGGAATGATTGGACGTCCCTCCATCGTGAGAAGCCAGACT
TGTGACAAATATGACCCCTCGGGCTTCTACGTGGCTTACGCAGCGTGGTC
GGGTGGTGTGTTTGTTGACATGTCGGTCCATGATATCGACCTGACCTTGT
GGTTCATGGGAGAGGACTCGGTCCCCAAGAGCATCTCCGCCCACGGAATC
ACGGCTGTCCAGCCTGAGTTGAAGAAGTACAACGACTACGACAACGCAGT
CGGAATTGTTGAGTTTCACAATGGCAAAATCGCCTACTACTACTGCTCTC
GAATGATGCCCCATGGACAAGAAGATACGACGGAAGTTATTGGCACCGAA
GGGAAGCTGTCTGTTAACATCAACCCGCAACGCAACTTCGTCAACTACTA
CCACAACGGCGGCATCACGCGCGAGGTCCCTGCAAATTTCCACGGGCGCT
TCGGAGGTGCCTTTGTGAACGAGGCAAACGAATTCACTGCCTGTTGCTTA
GACAACAAACCACTACCCCTCAAGCTGTCTAACGCAGTCAAAGCTGTTGA
GATTGGCGCATACCTTCAGGAGGCATTGGTGACAGGGAAGCAGATCCACT
TTGATGAGATCGGTAGAAGGATTGAGAAGGCTCAGTTGTAGATGCCAATT
CAAAAGCTGAAAGTTGGTATGGCTGGTCTGGGCCGGATAGGCAAGGTCCA
TGTCCACAACTTCCTTCACCAAACCCCACGGGCCGAAGTTGTCGCCGCCT
TCTCCCCCGACCCTGCCGAGATTACATGGGGTAGACAACACCTAGAGCCT
TATGGAGTTACATTATATGATAACTATGACAAGATGCTGGAGCACCCCGG
CTTGCAAGCAGTCGTCATCGGGACGGCGACCTCGGTGCATGCCGAGGAGA
CGATGAAAGCTATCGATCGGGACCTGCACGTCCTTTGTGAGAAGCCATTG
TCAATTGATGTGGAAGTGTGCAGAGCAGTTGCACAGAAGGCTAAGACCAA
GCCACACTTGAAGGTGATGTGTGGCTTTTCTCGGAGATTCGATGACTCCT
ATCGCGAGGTTTATGATAAGATTAGCCAGGGAATGATTGGACGTCCCTCC
ATCGTGAGAAGCCAGACTTGTGACAAATATGACCCCTCGGGCTTCTACGT
GGCTTACGCAGCGTGGTCGGGTGGTGTGTTTGTTGACATGTCGGTCCATG
ATATCGACCTGACCTTGTGGTTCATGGGAGAGGACTCGGTCCCCAAGAGC
ATCTCCGCCCACGGAATCACGGCTGTCCAGCCTGAGTTGAAGAAGTACAA
CGACTACGACAACGCAGTCGGAATTGTTGAGTTTCACAATGGCAAAATCG
CCTACTACTACTGCTCTCGAATGATGCCCCATGGACAAGAAGATACGACG
GAAGTTATTGGCACCGAAGGGAAGCTGTCTGTTAACATCAACCCGCAACG
CAACTTCGTCAACTACTACCACAACGGCGGCATCACGCGCGAGGTCCCTG
CAAATTTCCACGGGCGCTTCGGAGGTGCCTTTGTGAACGAGGCAAACGAA
TTCACTGCCTGTTGCTTAGACAACAAACCACTACCCCTCAAGCTGTCTAA
CGCAGTCAAAGCTGTTGAGATTGGCGCATACCTTCAGGAGGCATTGGTGA
CAGGGAAGCAGATCCACTTTGATGAGATCGGTAGAAGGATTGAGAAGGCT
CAGTTGTAGATGCCAATTCAAAAGCTGAAAGTTGGTATGGCTGGTCTGGG
CCGGATAGGCAAGGTCCATGTCCACAACTTCCTTCACCAAACCCCACGGG
CCGAAGTTGTCGCCGCCTTCTCCCCCGACCCTGCCGAGATTACATGGGGT
AGACAACACCTAGAGCCTTATGGAGTTACATTATATGATAACTATGACAA
GATGCTGGAGCACCCCGGCTTGCAAGCAGTCGTCATCGGGACGGCGACCT
CGGTGCATGCCGAGGAGACGATGAAAGCTATCGATCGGGACCTGCACGTC
CTTTGTGAGAAGCCATTGTCAATTGATGTGGAAGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002242-T1.utr3p1 | KJC3_002242-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002242-T1.utr5p1 | KJC3_002242-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR004104 |
| DBxref | InterPro:IPR000683 |
| DBxref | PFAM:PF02894 |
| DBxref | PFAM:PF01408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2057498..2059002 - |
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