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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2059244..2060285- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002243-T1 ID=KJC3_002243-T1|Name=KJC3_002243-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1042bp|location=Sequence derived from alignment at ch2:2059244..2060285- (Aspergillus niger KJC3)
AAACACTCCAGCCCATCTTCAGGATTTAGGCTGTCACAGTCAAGCCTATC
ACAGAACAAGATGTCTTAGTGCTGCGTACGCAGCAGATTCTTCACAAATC
TCGTGCCCCTGGTGACCCCATCGACTCCCACCATAGTATATGATGAGCGC
TCTTCCCTGCCTGACTATTCTCAGATAACAACTCATTTCTAAGTGCCAGG
TATTGACACGAAAATCTCTCAGCACCTCATACATTCTGTCTCAAGAAAAT
GATCGGCTACTCCTCGTACTCAATACAGCCTTTGTGGTTGGTGTTAATTG
TACTATCGTCACCAGCGGTCGCACAGGGTGTACTTAATAGCGTCGACAGC
CAAGATGGAGATGGCGAATCAGAGTCATATTCGACGACGCGAAGCGTTTC
CTCTAAAGGAATGATAATATTGTGCACCATCGTGGCGTTGGTTTTGGTTA
TCGGTGGTATGTCTCCTTAGAAATGAGACACGCTCGAGGAAGGGTTTTGT
GTTCGAACAGGCGCTGACAACTCCGTTGACATAGTTTTATTCACCGTTGT
GTTCATCACTGTAAAGAAGAGGAGCTCGAAGACTTCCAAGACACCCTCCT
CACAAAATGAAGCAGTAATAGAAGCCACGGAAAGGCCGTTGAGCGGCAAT
ACACCGACAGAAAGGGACGCCTCTAGATCCAAAACTTCGAATCACGCAGG
GATTCAGCCAGATATAGAGAAGAATGCTGGTGTTGATCAAGGCCGACCGC
ACAGAAATGCTTGGATGAAGCAAAGAGGATGGGGGTCCTACTTCTCTTTC
GGGCGCGCATAGAAGCGATGGCTCAGCCACAGCATCTCATTCATCTCAAA
TAATTCAGCGATCCATTCAAGAAAATTTTGATTGATAGCAGCTCAGCGTG
ATGGCTTTCCAGTTATTGTACTTTTCAATTTCGTTCTTGTGGTCTCACGA
ACTTCCCCCGCGTTGTTTCTTGATGTATATCTTGAGGAATACCCCGCACT
CATTAATATTGACATTGGCTCCAATAATATGGGGCATCAGCA back to topCoding sequence (CDS) from alignment at ch2:2059244..2060285- >KJC3_002243-T1 ID=KJC3_002243-T1|Name=KJC3_002243-T1|organism=Aspergillus niger KJC3|type=CDS|length=972bp|location=Sequence derived from alignment at ch2:2059244..2060285- (Aspergillus niger KJC3)
TTTTATTCACCGTTGTGTTCATCACTGTAAAGAAGAGGAGCTCGAAGACT
TCCAAGACACCCTCCTCACAAAATGAAGCAGTAATAGAAGCCACGGAAAG
GCCGTTGAGCGGCAATACACCGACAGAAAGGGACGCCTCTAGATCCAAAA
CTTCGAATCACGCAGGGATTCAGCCAGATATAGAGAAGAATGCTGGTGTT
GATCAAGGCCGACCGCACAGAAATGCTTGGATGAAGCAAAGAGGATGGGG
GTCCTACTTCTCTTTCGGGCGCGCATAGATGATCGGCTACTCCTCGTACT
CAATACAGCCTTTGTGGTTGGTGTTAATTGTACTATCGTCACCAGCGGTC
GCACAGGGTGTACTTAATAGCGTCGACAGCCAAGATGGAGATGGCGAATC
AGAGTCATATTCGACGACGCGAAGCGTTTCCTCTAAAGGAATGATAATAT
TGTGCACCATCGTGGCGTTGGTTTTGGTTATCGGTGTTTTATTCACCGTT
GTGTTCATCACTGTAAAGAAGAGGAGCTCGAAGACTTCCAAGACACCCTC
CTCACAAAATGAAGCAGTAATAGAAGCCACGGAAAGGCCGTTGAGCGGCA
ATACACCGACAGAAAGGGACGCCTCTAGATCCAAAACTTCGAATCACGCA
GGGATTCAGCCAGATATAGAGAAGAATGCTGGTGTTGATCAAGGCCGACC
GCACAGAAATGCTTGGATGAAGCAAAGAGGATGGGGGTCCTACTTCTCTT
TCGGGCGCGCATAGATGATCGGCTACTCCTCGTACTCAATACAGCCTTTG
TGGTTGGTGTTAATTGTACTATCGTCACCAGCGGTCGCACAGGGTGTACT
TAATAGCGTCGACAGCCAAGATGGAGATGGCGAATCAGAGTCATATTCGA
CGACGCGAAGCGTTTCCTCTAAAGGAATGATAATATTGTGCACCATCGTG
GCGTTGGTTTTGGTTATCGGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002243-T1.utr3p1 | KJC3_002243-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-25) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2059244..2060285 - |
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