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KJC3_002268-T1, KJC3_002268-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002268-T1
Unique NameKJC3_002268-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2119458..2120639-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002268-T1 ID=KJC3_002268-T1|Name=KJC3_002268-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1182bp|location=Sequence derived from alignment at ch2:2119458..2120639- (Aspergillus niger KJC3)
CAATTGATCACATTTGTTCATCATGTTGGGGAAGAGATTGTTCTCCACGT
TTCGGAGCTTGCAGCATGAGAACCCACTGGTACGCTCTCTTCTTCCTATT
TCAATGGCATGTTTGGTGTTAATCTGGTGAATACAGGGCCTCCCTCGCTC
CGGTACGCCGCCGTCTCTCCGAAGTCGTCGCGGTCTCCCCGAGAAGCGCA
AGATCCGCGATGTGAAGAAGGTTATTGCTGTGTCTTCGGCGAAGGGCGGT
GTTGGGAAGTCGACGATAGCGGGTATGCCTCTATACCAATATATATCTTA
CATCAATCAGACGAGATACTTATGTTCCTATTATCAACAGTCAACCTCGC
TCTCGCCTTCGCCCGCCGCGGCATTCGCACCGGCATCCTCGACACCGACA
TCTTCGGTCCATCCATTCCAACCCTGTTGAATCTATCCGGCGAGCCTAGA
TTAGACGATAGTGCGTGCTCCCATCTCCCCTACGCAACACATAACTAACG
CCTCTGACCTCCAACAGAAAACTGCCTCCTCCCCCTAACCAACTACGGCC
TCAAATCCATGTCCATGGGCTACCTCCTCCCCAGCACCCAACCACCCCCG
AACACCGATCCAACCGAGCGAGCCCCCATGGACCCGACCCCCATTTCCTG
GCGCGGCTTAATGGTCACCAAAGCGATGCACCAACTCCTCCACTCCGTAT
CCTGGGGTCCACTCGACGTGCTCTTCCTCGACTTGCCCCCGGGCACCGGC
GACGTGCAACTCACCATCAACCAGGAGATTATCCTGGATGGAGCAGTGAT
CGTGACCACGCCGCAGGATATCGCGCTACGGGATGCGGTGCGCGGAATTG
GCATGTTCCAGCGCATGGATGTGCCGGTGCTGGGGATGGTGAGGAATATG
GCGTTCTTTGCGTGCCCGGAGTGTGGAACGCAGACGAAGATCTTTTCGCA
GGGGAGGCATGTGCATGAGGGGGCGGATTGGGGGGTTGAGGCCGAGTGTA
GGAGGCTAGGCGTTGGGTTTTTGGGCGATGTGCCACTGGATGCGAGGGTC
TGTGAGGATGCGGACCGCGGGGTGCCGAGTGTGGTTGCTGAGGAGGGGAA
GGAGGGCAAGGAGGGGGTTAGGAGGAAGGCGTTTTTGGATGTTGCCGAGC
AGGTCGCGAAGAAGGTGGGGATTGAGTGGTAA
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Coding sequence (CDS) from alignment at ch2:2119458..2120639-

>KJC3_002268-T1 ID=KJC3_002268-T1|Name=KJC3_002268-T1|organism=Aspergillus niger KJC3|type=CDS|length=3912bp|location=Sequence derived from alignment at ch2:2119458..2120639- (Aspergillus niger KJC3)
AAAACTGCCTCCTCCCCCTAACCAACTACGGCCTCAAATCCATGTCCATG
GGCTACCTCCTCCCCAGCACCCAACCACCCCCGAACACCGATCCAACCGA
GCGAGCCCCCATGGACCCGACCCCCATTTCCTGGCGCGGCTTAATGGTCA
CCAAAGCGATGCACCAACTCCTCCACTCCGTATCCTGGGGTCCACTCGAC
GTGCTCTTCCTCGACTTGCCCCCGGGCACCGGCGACGTGCAACTCACCAT
CAACCAGGAGATTATCCTGGATGGAGCAGTGATCGTGACCACGCCGCAGG
ATATCGCGCTACGGGATGCGGTGCGCGGAATTGGCATGTTCCAGCGCATG
GATGTGCCGGTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGCGTGCCC
GGAGTGTGGAACGCAGACGAAGATCTTTTCGCAGGGGAGGCATGTGCATG
AGGGGGCGGATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTAGGCGTTGGG
TTTTTGGGCGATGTGCCACTGGATGCGAGGGTCTGTGAGGATGCGGACCG
CGGGGTGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGG
TTAGGAGGAAGGCGTTTTTGGATGTTGCCGAGCAGGTCGCGAAGAAGGTG
GGGATTGAGTGGTAATCAACCTCGCTCTCGCCTTCGCCCGCCGCGGCATT
CGCACCGGCATCCTCGACACCGACATCTTCGGTCCATCCATTCCAACCCT
GTTGAATCTATCCGGCGAGCCTAGATTAGACGATAGGCCTCCCTCGCTCC
GGTACGCCGCCGTCTCTCCGAAGTCGTCGCGGTCTCCCCGAGAAGCGCAA
GATCCGCGATGTGAAGAAGGTTATTGCTGTGTCTTCGGCGAAGGGCGGTG
TTGGGAAGTCGACGATAGCGGATGTTGGGGAAGAGATTGTTCTCCACGTT
TCGGAGCTTGCAGCATGAGAACCCACTGAAAACTGCCTCCTCCCCCTAAC
CAACTACGGCCTCAAATCCATGTCCATGGGCTACCTCCTCCCCAGCACCC
AACCACCCCCGAACACCGATCCAACCGAGCGAGCCCCCATGGACCCGACC
CCCATTTCCTGGCGCGGCTTAATGGTCACCAAAGCGATGCACCAACTCCT
CCACTCCGTATCCTGGGGTCCACTCGACGTGCTCTTCCTCGACTTGCCCC
CGGGCACCGGCGACGTGCAACTCACCATCAACCAGGAGATTATCCTGGAT
GGAGCAGTGATCGTGACCACGCCGCAGGATATCGCGCTACGGGATGCGGT
GCGCGGAATTGGCATGTTCCAGCGCATGGATGTGCCGGTGCTGGGGATGG
TGAGGAATATGGCGTTCTTTGCGTGCCCGGAGTGTGGAACGCAGACGAAG
ATCTTTTCGCAGGGGAGGCATGTGCATGAGGGGGCGGATTGGGGGGTTGA
GGCCGAGTGTAGGAGGCTAGGCGTTGGGTTTTTGGGCGATGTGCCACTGG
ATGCGAGGGTCTGTGAGGATGCGGACCGCGGGGTGCCGAGTGTGGTTGCT
GAGGAGGGGAAGGAGGGCAAGGAGGGGGTTAGGAGGAAGGCGTTTTTGGA
TGTTGCCGAGCAGGTCGCGAAGAAGGTGGGGATTGAGTGGTAATCAACCT
CGCTCTCGCCTTCGCCCGCCGCGGCATTCGCACCGGCATCCTCGACACCG
ACATCTTCGGTCCATCCATTCCAACCCTGTTGAATCTATCCGGCGAGCCT
AGATTAGACGATAGGCCTCCCTCGCTCCGGTACGCCGCCGTCTCTCCGAA
GTCGTCGCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAGAAGGTT
ATTGCTGTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGATAGCGGA
TGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCATGAGAAC
CCACTGAAAACTGCCTCCTCCCCCTAACCAACTACGGCCTCAAATCCATG
TCCATGGGCTACCTCCTCCCCAGCACCCAACCACCCCCGAACACCGATCC
AACCGAGCGAGCCCCCATGGACCCGACCCCCATTTCCTGGCGCGGCTTAA
TGGTCACCAAAGCGATGCACCAACTCCTCCACTCCGTATCCTGGGGTCCA
CTCGACGTGCTCTTCCTCGACTTGCCCCCGGGCACCGGCGACGTGCAACT
CACCATCAACCAGGAGATTATCCTGGATGGAGCAGTGATCGTGACCACGC
CGCAGGATATCGCGCTACGGGATGCGGTGCGCGGAATTGGCATGTTCCAG
CGCATGGATGTGCCGGTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGC
GTGCCCGGAGTGTGGAACGCAGACGAAGATCTTTTCGCAGGGGAGGCATG
TGCATGAGGGGGCGGATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTAGGC
GTTGGGTTTTTGGGCGATGTGCCACTGGATGCGAGGGTCTGTGAGGATGC
GGACCGCGGGGTGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGG
AGGGGGTTAGGAGGAAGGCGTTTTTGGATGTTGCCGAGCAGGTCGCGAAG
AAGGTGGGGATTGAGTGGTAATCAACCTCGCTCTCGCCTTCGCCCGCCGC
GGCATTCGCACCGGCATCCTCGACACCGACATCTTCGGTCCATCCATTCC
AACCCTGTTGAATCTATCCGGCGAGCCTAGATTAGACGATAGGCCTCCCT
CGCTCCGGTACGCCGCCGTCTCTCCGAAGTCGTCGCGGTCTCCCCGAGAA
GCGCAAGATCCGCGATGTGAAGAAGGTTATTGCTGTGTCTTCGGCGAAGG
GCGGTGTTGGGAAGTCGACGATAGCGGATGTTGGGGAAGAGATTGTTCTC
CACGTTTCGGAGCTTGCAGCATGAGAACCCACTGAAAACTGCCTCCTCCC
CCTAACCAACTACGGCCTCAAATCCATGTCCATGGGCTACCTCCTCCCCA
GCACCCAACCACCCCCGAACACCGATCCAACCGAGCGAGCCCCCATGGAC
CCGACCCCCATTTCCTGGCGCGGCTTAATGGTCACCAAAGCGATGCACCA
ACTCCTCCACTCCGTATCCTGGGGTCCACTCGACGTGCTCTTCCTCGACT
TGCCCCCGGGCACCGGCGACGTGCAACTCACCATCAACCAGGAGATTATC
CTGGATGGAGCAGTGATCGTGACCACGCCGCAGGATATCGCGCTACGGGA
TGCGGTGCGCGGAATTGGCATGTTCCAGCGCATGGATGTGCCGGTGCTGG
GGATGGTGAGGAATATGGCGTTCTTTGCGTGCCCGGAGTGTGGAACGCAG
ACGAAGATCTTTTCGCAGGGGAGGCATGTGCATGAGGGGGCGGATTGGGG
GGTTGAGGCCGAGTGTAGGAGGCTAGGCGTTGGGTTTTTGGGCGATGTGC
CACTGGATGCGAGGGTCTGTGAGGATGCGGACCGCGGGGTGCCGAGTGTG
GTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGGTTAGGAGGAAGGCGTT
TTTGGATGTTGCCGAGCAGGTCGCGAAGAAGGTGGGGATTGAGTGGTAAT
CAACCTCGCTCTCGCCTTCGCCCGCCGCGGCATTCGCACCGGCATCCTCG
ACACCGACATCTTCGGTCCATCCATTCCAACCCTGTTGAATCTATCCGGC
GAGCCTAGATTAGACGATAGGCCTCCCTCGCTCCGGTACGCCGCCGTCTC
TCCGAAGTCGTCGCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAG
AAGGTTATTGCTGTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGAT
AGCGGATGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCAT
GAGAACCCACTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002268KJC3_002268Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002268-T1KJC3_002268-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002268-T1.cdsKJC3_002268-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002268-T1.exon4KJC3_002268-T1.exon4Aspergillus niger KJC3exon
KJC3_002268-T1.exon3KJC3_002268-T1.exon3Aspergillus niger KJC3exon
KJC3_002268-T1.exon2KJC3_002268-T1.exon2Aspergillus niger KJC3exon
KJC3_002268-T1.exon1KJC3_002268-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002268-T1.utr5p1KJC3_002268-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR033756
DBxrefPFAM:PF10609
DBxrefPFAM:PF01656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2119458..2120639 -
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