You are here

Home

KJC3_002275-T1, KJC3_002275-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002275-T1
Unique NameKJC3_002275-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2134458..2135764+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002275-T1 ID=KJC3_002275-T1|Name=KJC3_002275-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1307bp|location=Sequence derived from alignment at ch2:2134458..2135764+ (Aspergillus niger KJC3)
ATGGAAAAGCCTGAGCCACCGAAAAAGGCTAAATCGAATATTATCGAGCA
GAGTACAGCTTATACTACGCCGCCAAATGGTGGTCTCCGAGCCTGGCTGC
AGGTGGCAGGCTCCTTCTTCCTCTTCTTCAACTCATGGTACTATTTTCAT
ATCGTCCCAGTGAGATATACTACTAACATGGCACCTTCGTGAACCACAGG
GGAACGGTAAACACATATGGTGCCTTCCAAACCTACTATGAAATCGGCCT
GCTTAAGGCCCAGTCCAGATCAGACATCTCCTGGATCGGCGCAATCCAAG
CATTTCTCCTCCTCCTAATTGGAGTTATCGCTGGTCCCCTATACGATTCA
GGATACTTTTACATCCTCATCATCACTGGCTCCGCCCTTATCGTCGTCGG
ATTCATGGCACTCAGTGTCTGCACCTCATACTGGCAAGTCCTCCTCGCGC
AAGCATTCTGCATCGGGCTCGGAAATGGATGTCTCTACATCCCCTCTGTA
GCCATAATTCCACAATATTTCTCCTCGCGGCGTCCCATCGCTATCGCTAT
CGCCGCGTCTGGAAGCAGCCTCGGAGGCGTCCTCTATCCCATCATCTTCC
GCCAACTCCAGCCTCGCATCGGCTTCGGATGGGCCACACGAGCACTCGGG
CTTATAGTCCTGGTAACGACTGTCTTTTCCCTGTGTGTTATGCGCGTACG
TCAAATTCCCAAGCACAAACGCGTCTTAGCCGAATCTTCCGCCTTCAAAG
AGATACCCTATACCTTATTCTGCGTGGCCATGTTCTTCGGCTACATTGGC
CTTTTCAACCCCATCTTCTACATAGAAGCCTACGCCATCCACAAGCATGC
TGTAGGTGAACCCCTCGCCTTCTATCTTGTCTCAATACTCAATGCTGCGT
CTGTTCCCGGGAGAATCATCCCAGGACTTCTAGCCCCGCGCTTCGGTCCG
TTGAACATTCTCCTGGCGAGTGCTATTATCAGTGGGATTCTAGCGCTATG
CTGGATCGCTATCACCGACTCCGGAGGTTTGATCGCATTTGCTGTCCTGT
ATGGGTTTTTCTCTGGGGCTTTTGTTGCACTTCCCGCTGTGGCTTTGACC
GCCCTTACTCCAAACCTTGAAACCTTGGGAACGAGACTGGGTATGTGTTC
GGTGTTGTGTGGGTTGGGGTCACTGTGTGGCTCGCCTGTTGCGGGTGCCA
TTTTGGATAATACGGGGTCATATCTGGGTGTACAGCTGTATTCGGGGCTT
AGTATTGGGGCTACGGGTGTGTTATTACTCTTTGCGAGGATGTCGAAGAC
AGATTGA
back to top

Coding sequence (CDS) from alignment at ch2:2134458..2135764+

>KJC3_002275-T1 ID=KJC3_002275-T1|Name=KJC3_002275-T1|organism=Aspergillus niger KJC3|type=CDS|length=2490bp|location=Sequence derived from alignment at ch2:2134458..2135764+ (Aspergillus niger KJC3)
ATGGAAAAGCCTGAGCCACCGAAAAAGGCTAAATCGAATATTATCGAGCA
GAGTACAGCTTATACTACGCCGCCAAATGGTGGTCTCCGAGCCTGGCTGC
AGGTGGCAGGCTCCTTCTTCCTCTTCTTCAACTCATGGGGAACGGTAAAC
ACATATGGTGCCTTCCAAACCTACTATGAAATCGGCCTGCTTAAGGCCCA
GTCCAGATCAGACATCTCCTGGATCGGCGCAATCCAAGCATTTCTCCTCC
TCCTAATTGGAGTTATCGCTGGTCCCCTATACGATTCAGGATACTTTTAC
ATCCTCATCATCACTGGCTCCGCCCTTATCGTCGTCGGATTCATGGCACT
CAGTGTCTGCACCTCATACTGGCAAGTCCTCCTCGCGCAAGCATTCTGCA
TCGGGCTCGGAAATGGATGTCTCTACATCCCCTCTGTAGCCATAATTCCA
CAATATTTCTCCTCGCGGCGTCCCATCGCTATCGCTATCGCCGCGTCTGG
AAGCAGCCTCGGAGGCGTCCTCTATCCCATCATCTTCCGCCAACTCCAGC
CTCGCATCGGCTTCGGATGGGCCACACGAGCACTCGGGCTTATAGTCCTG
GTAACGACTGTCTTTTCCCTGTGTGTTATGCGCGTACGTCAAATTCCCAA
GCACAAACGCGTCTTAGCCGAATCTTCCGCCTTCAAAGAGATACCCTATA
CCTTATTCTGCGTGGCCATGTTCTTCGGCTACATTGGCCTTTTCAACCCC
ATCTTCTACATAGAAGCCTACGCCATCCACAAGCATGCTGTAGGTGAACC
CCTCGCCTTCTATCTTGTCTCAATACTCAATGCTGCGTCTGTTCCCGGGA
GAATCATCCCAGGACTTCTAGCCCCGCGCTTCGGTCCGTTGAACATTCTC
CTGGCGAGTGCTATTATCAGTGGGATTCTAGCGCTATGCTGGATCGCTAT
CACCGACTCCGGAGGTTTGATCGCATTTGCTGTCCTGTATGGGTTTTTCT
CTGGGGCTTTTGTTGCACTTCCCGCTGTGGCTTTGACCGCCCTTACTCCA
AACCTTGAAACCTTGGGAACGAGACTGGGTATGTGTTCGGTGTTGTGTGG
GTTGGGGTCACTGTGTGGCTCGCCTGTTGCGGGTGCCATTTTGGATAATA
CGGGGTCATATCTGGGTGTACAGCTGTATTCGGGGCTTAGTATTGGGGCT
ACGGGTGTGTTATTACTCTTTGCGAGGATGTCGAAGACAGATTGAATGGA
AAAGCCTGAGCCACCGAAAAAGGCTAAATCGAATATTATCGAGCAGAGTA
CAGCTTATACTACGCCGCCAAATGGTGGTCTCCGAGCCTGGCTGCAGGTG
GCAGGCTCCTTCTTCCTCTTCTTCAACTCATGGGGAACGGTAAACACATA
TGGTGCCTTCCAAACCTACTATGAAATCGGCCTGCTTAAGGCCCAGTCCA
GATCAGACATCTCCTGGATCGGCGCAATCCAAGCATTTCTCCTCCTCCTA
ATTGGAGTTATCGCTGGTCCCCTATACGATTCAGGATACTTTTACATCCT
CATCATCACTGGCTCCGCCCTTATCGTCGTCGGATTCATGGCACTCAGTG
TCTGCACCTCATACTGGCAAGTCCTCCTCGCGCAAGCATTCTGCATCGGG
CTCGGAAATGGATGTCTCTACATCCCCTCTGTAGCCATAATTCCACAATA
TTTCTCCTCGCGGCGTCCCATCGCTATCGCTATCGCCGCGTCTGGAAGCA
GCCTCGGAGGCGTCCTCTATCCCATCATCTTCCGCCAACTCCAGCCTCGC
ATCGGCTTCGGATGGGCCACACGAGCACTCGGGCTTATAGTCCTGGTAAC
GACTGTCTTTTCCCTGTGTGTTATGCGCGTACGTCAAATTCCCAAGCACA
AACGCGTCTTAGCCGAATCTTCCGCCTTCAAAGAGATACCCTATACCTTA
TTCTGCGTGGCCATGTTCTTCGGCTACATTGGCCTTTTCAACCCCATCTT
CTACATAGAAGCCTACGCCATCCACAAGCATGCTGTAGGTGAACCCCTCG
CCTTCTATCTTGTCTCAATACTCAATGCTGCGTCTGTTCCCGGGAGAATC
ATCCCAGGACTTCTAGCCCCGCGCTTCGGTCCGTTGAACATTCTCCTGGC
GAGTGCTATTATCAGTGGGATTCTAGCGCTATGCTGGATCGCTATCACCG
ACTCCGGAGGTTTGATCGCATTTGCTGTCCTGTATGGGTTTTTCTCTGGG
GCTTTTGTTGCACTTCCCGCTGTGGCTTTGACCGCCCTTACTCCAAACCT
TGAAACCTTGGGAACGAGACTGGGTATGTGTTCGGTGTTGTGTGGGTTGG
GGTCACTGTGTGGCTCGCCTGTTGCGGGTGCCATTTTGGATAATACGGGG
TCATATCTGGGTGTACAGCTGTATTCGGGGCTTAGTATTGGGGCTACGGG
TGTGTTATTACTCTTTGCGAGGATGTCGAAGACAGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002275KJC3_002275Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002275-T1.exon1KJC3_002275-T1.exon1Aspergillus niger KJC3exon
KJC3_002275-T1.exon2KJC3_002275-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002275-T1.cdsKJC3_002275-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002275-T1KJC3_002275-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2134458..2135764 +
Powered by Drupal