You are here

Home

KJC3_002280-T1, KJC3_002280-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002280-T1
Unique NameKJC3_002280-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2155769..2157402+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002280-T1 ID=KJC3_002280-T1|Name=KJC3_002280-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1634bp|location=Sequence derived from alignment at ch2:2155769..2157402+ (Aspergillus niger KJC3)
ATGAGCCACGATCCTCCAGGCGACCCTTTAATGTCGCATTCGTCACGCCG
GCTCCGGCGTCTATACGAACCTCTATCCCTACTTCAGACGCTGGGAAATG
TTCGAGGTTTGCGTATCAGAGCCTGTGACATACCGCAGGATAATTCTGGT
TTCAACGCCATAAAAAGTCATAGGTCATTTGTGGATGCACTTGCCTACGC
CTGCGCATACAAGAAGGAGCCTGCCTATGTGACCGCGGTCGCGTTGGAAA
AGAGACCAGAAGAAATAGTGGTTTGGCTAGCAGCGAACAAGAATGTGGAG
GAAACCGTTGTCAGCTTTGCTCAAGATGTCTTGAGAATTGTACAATGGCT
GGCAAGAAACCCATCGGCTCAACTGAGCACCGAAGATGGCCAAAGATCCC
TTAATCTTTTGACGAGCAGAGTCTTGCACTTTAATGCCCCCAAAATCTAT
GCTTATTATGAGCAAATTGTGAGGAAAGCTGCGCCTCCAGTAATAGCAAA
GCTTTCTAATGGGCAGCATGAAGGTATGTTAGGCTTGTGGTGTATGTCGA
GTATACGCGTCTGACATGATGGTAACGCCTAGGTAACCCTGATGTTGCCA
ATCTCAAAAATTGGCTGTCCCAGCACCTGCAAAGGGACGGTGTACAACTC
CAAGAAGTGGATATGGCGAAATTGGCCGTCATAAGTCACAACTCACGAGA
TACCTTCGAGGTCCTCCGAGACCTAGCCATGGAATCACATGAGTCTCACA
CTTTTGAGCGGCTCTTTAAGTTGCTCAGTAAACTTGGGAAGCATGTGATC
ATGAGCAAACGAATAATCGAAGGCGCAATATTCTTACGTTCAGACTTTGC
AAGAGGGATGAGACTCGAGACAGTTCCTGCGTCTCGAGAGCGTCCCCTTC
CCTTTTCGCCCCGCAAGTACAATATCGAAGGCATTAGCAACCGGATGTTC
TCTAGTGATTCAGCAGAGAAGCAGAGGTTTCTTGCCCGTCTGCGGACAAT
TTGGGATACAAAAGAATGGGACAAGAACTTGGCTAAGGAGCACCTCCCGG
GTAAAAGCATTGTGCATGCTGAAATATTGATACTCGATCATTTTGAGAAG
ACCGGTGGAGATTTTCTGAATAATTCGGACAAGTATATCGGATGCAGCAA
GCCTGCCTGTTATCTTTGCTATCACTATATCTGCAATCATCCAGGCCGTT
ATATTCGCCCTTCATCTCACCAGAAACTTTATATGAGGTGGCGCCTTCCC
GACATCAGCGAAACAGAACCGAACGCCGCCCCCCGTTTCAGAAACCAAGA
GCAGATTCTCAATAATCTGATCGATCTAGTACGACGGGAATTGAAGAATG
ACATTGAAACTGGAGTGGGCAAGATGAAGGAATGCCCTGACTCAACAGCA
GGAGGAACTTCGAACATGTTTGAACTTGAGACAGGACTAGAGGCCGACAT
GGGTTCTTTATCTTTCCAAGAGCTCCGACACCAAATTGACCCCGACTTCC
AATACGTCGTTATTCCCGACCCAGTCAGCAGTTCTAGTAGTGCCTCTAGC
ATTCACTCGCGTTCTAGCGCGGATACTGCTGTGTCTGAAGGGGATGAAGT
TGAATACGATAGTGACGGGGGAGTAGTTGTCTAA
back to top

Coding sequence (CDS) from alignment at ch2:2155769..2157402+

>KJC3_002280-T1 ID=KJC3_002280-T1|Name=KJC3_002280-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch2:2155769..2157402+ (Aspergillus niger KJC3)
ATGAGCCACGATCCTCCAGGCGACCCTTTAATGTCGCATTCGTCACGCCG
GCTCCGGCGTCTATACGAACCTCTATCCCTACTTCAGACGCTGGGAAATG
TTCGAGGTTTGCGTATCAGAGCCTGTGACATACCGCAGGATAATTCTGGT
TTCAACGCCATAAAAAGTCATAGGTCATTTGTGGATGCACTTGCCTACGC
CTGCGCATACAAGAAGGAGCCTGCCTATGTGACCGCGGTCGCGTTGGAAA
AGAGACCAGAAGAAATAGTGGTTTGGCTAGCAGCGAACAAGAATGTGGAG
GAAACCGTTGTCAGCTTTGCTCAAGATGTCTTGAGAATTGTACAATGGCT
GGCAAGAAACCCATCGGCTCAACTGAGCACCGAAGATGGCCAAAGATCCC
TTAATCTTTTGACGAGCAGAGTCTTGCACTTTAATGCCCCCAAAATCTAT
GCTTATTATGAGCAAATTGTGAGGAAAGCTGCGCCTCCAGTAATAGCAAA
GCTTTCTAATGGGCAGCATGAAGGTAACCCTGATGTTGCCAATCTCAAAA
ATTGGCTGTCCCAGCACCTGCAAAGGGACGGTGTACAACTCCAAGAAGTG
GATATGGCGAAATTGGCCGTCATAAGTCACAACTCACGAGATACCTTCGA
GGTCCTCCGAGACCTAGCCATGGAATCACATGAGTCTCACACTTTTGAGC
GGCTCTTTAAGTTGCTCAGTAAACTTGGGAAGCATGTGATCATGAGCAAA
CGAATAATCGAAGGCGCAATATTCTTACGTTCAGACTTTGCAAGAGGGAT
GAGACTCGAGACAGTTCCTGCGTCTCGAGAGCGTCCCCTTCCCTTTTCGC
CCCGCAAGTACAATATCGAAGGCATTAGCAACCGGATGTTCTCTAGTGAT
TCAGCAGAGAAGCAGAGGTTTCTTGCCCGTCTGCGGACAATTTGGGATAC
AAAAGAATGGGACAAGAACTTGGCTAAGGAGCACCTCCCGGGTAAAAGCA
TTGTGCATGCTGAAATATTGATACTCGATCATTTTGAGAAGACCGGTGGA
GATTTTCTGAATAATTCGGACAAGTATATCGGATGCAGCAAGCCTGCCTG
TTATCTTTGCTATCACTATATCTGCAATCATCCAGGCCGTTATATTCGCC
CTTCATCTCACCAGAAACTTTATATGAGGTGGCGCCTTCCCGACATCAGC
GAAACAGAACCGAACGCCGCCCCCCGTTTCAGAAACCAAGAGCAGATTCT
CAATAATCTGATCGATCTAGTACGACGGGAATTGAAGAATGACATTGAAA
CTGGAGTGGGCAAGATGAAGGAATGCCCTGACTCAACAGCAGGAGGAACT
TCGAACATGTTTGAACTTGAGACAGGACTAGAGGCCGACATGGGTTCTTT
ATCTTTCCAAGAGCTCCGACACCAAATTGACCCCGACTTCCAATACGTCG
TTATTCCCGACCCAGTCAGCAGTTCTAGTAGTGCCTCTAGCATTCACTCG
CGTTCTAGCGCGGATACTGCTGTGTCTGAAGGGGATGAAGTTGAATACGA
TAGTGACGGGGGAGTAGTTGTCTAAATGAGCCACGATCCTCCAGGCGACC
CTTTAATGTCGCATTCGTCACGCCGGCTCCGGCGTCTATACGAACCTCTA
TCCCTACTTCAGACGCTGGGAAATGTTCGAGGTTTGCGTATCAGAGCCTG
TGACATACCGCAGGATAATTCTGGTTTCAACGCCATAAAAAGTCATAGGT
CATTTGTGGATGCACTTGCCTACGCCTGCGCATACAAGAAGGAGCCTGCC
TATGTGACCGCGGTCGCGTTGGAAAAGAGACCAGAAGAAATAGTGGTTTG
GCTAGCAGCGAACAAGAATGTGGAGGAAACCGTTGTCAGCTTTGCTCAAG
ATGTCTTGAGAATTGTACAATGGCTGGCAAGAAACCCATCGGCTCAACTG
AGCACCGAAGATGGCCAAAGATCCCTTAATCTTTTGACGAGCAGAGTCTT
GCACTTTAATGCCCCCAAAATCTATGCTTATTATGAGCAAATTGTGAGGA
AAGCTGCGCCTCCAGTAATAGCAAAGCTTTCTAATGGGCAGCATGAAGGT
AACCCTGATGTTGCCAATCTCAAAAATTGGCTGTCCCAGCACCTGCAAAG
GGACGGTGTACAACTCCAAGAAGTGGATATGGCGAAATTGGCCGTCATAA
GTCACAACTCACGAGATACCTTCGAGGTCCTCCGAGACCTAGCCATGGAA
TCACATGAGTCTCACACTTTTGAGCGGCTCTTTAAGTTGCTCAGTAAACT
TGGGAAGCATGTGATCATGAGCAAACGAATAATCGAAGGCGCAATATTCT
TACGTTCAGACTTTGCAAGAGGGATGAGACTCGAGACAGTTCCTGCGTCT
CGAGAGCGTCCCCTTCCCTTTTCGCCCCGCAAGTACAATATCGAAGGCAT
TAGCAACCGGATGTTCTCTAGTGATTCAGCAGAGAAGCAGAGGTTTCTTG
CCCGTCTGCGGACAATTTGGGATACAAAAGAATGGGACAAGAACTTGGCT
AAGGAGCACCTCCCGGGTAAAAGCATTGTGCATGCTGAAATATTGATACT
CGATCATTTTGAGAAGACCGGTGGAGATTTTCTGAATAATTCGGACAAGT
ATATCGGATGCAGCAAGCCTGCCTGTTATCTTTGCTATCACTATATCTGC
AATCATCCAGGCCGTTATATTCGCCCTTCATCTCACCAGAAACTTTATAT
GAGGTGGCGCCTTCCCGACATCAGCGAAACAGAACCGAACGCCGCCCCCC
GTTTCAGAAACCAAGAGCAGATTCTCAATAATCTGATCGATCTAGTACGA
CGGGAATTGAAGAATGACATTGAAACTGGAGTGGGCAAGATGAAGGAATG
CCCTGACTCAACAGCAGGAGGAACTTCGAACATGTTTGAACTTGAGACAG
GACTAGAGGCCGACATGGGTTCTTTATCTTTCCAAGAGCTCCGACACCAA
ATTGACCCCGACTTCCAATACGTCGTTATTCCCGACCCAGTCAGCAGTTC
TAGTAGTGCCTCTAGCATTCACTCGCGTTCTAGCGCGGATACTGCTGTGT
CTGAAGGGGATGAAGTTGAATACGATAGTGACGGGGGAGTAGTTGTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002280KJC3_002280Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002280-T1.exon1KJC3_002280-T1.exon1Aspergillus niger KJC3exon
KJC3_002280-T1.exon2KJC3_002280-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002280-T1.cdsKJC3_002280-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002280-T1KJC3_002280-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027796
DBxrefPFAM:PF14441
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2155769..2157402 +
Powered by Drupal