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KJC3_002283-T1, KJC3_002283-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002283-T1
Unique NameKJC3_002283-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2167599..2169499+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002283-T1 ID=KJC3_002283-T1|Name=KJC3_002283-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1901bp|location=Sequence derived from alignment at ch2:2167599..2169499+ (Aspergillus niger KJC3)
TTCACAACTAGTGAATACCAAGACTTCCATCCGGATAGTCATCAGCAGAA
AAAGTAAAACCACACTATCCCCACTAGTCCAAACCTGCTTTCCAGCCCCC
AAGCACAATCAGCCTGCACATCCAAACCGCCCAACATTCTTTAACTTGAA
AGAGAAAAAGAGTACAACTGGCTTCTAGGGCAAACGCGGTGAACTCAGCA
ATCAACCTTGGACCCTAAATCAGAGCGGGAAGCCAATCGGCTGCCATCGC
CCCATTTCTGGCGGAGAGAGTCTAGAGGGTCCATCTGTGGCGTCTGTAGG
TCCATCTGACTGGCCTGCTACTTGTCCTTTCTTAGATTGCAGCTGGACGC
CTTTTAAGACGGGCGTGGACCCTGCAGATTTCAGGTGTAACTCACCTAGT
CACTCATTTATTCATTCGTTCTACCCTACTACACCAAACATTTGATATCG
TTTTTCACGCCAATTTCCTACTCACTGTTTCCACTATCTATATTCATTCA
TTCAACGACTACCTACTCAGCTATCCCGCGATGTATCATTAGATATTTAC
CACAATCACGACCACACCACAACCACAATCAAACTACAACATAATGTCCA
CCATGTTAACCCGACCCACCGCCATCCTCATCTTCTCCCTCGTCTTCCTC
AACCTCTACCTCTTCCACCGACTCATCCGCCAACCCGTCGTGCCACTCTC
ACCCACCATCGTCCCAACCCCAAGCCCAGCGGCAGCAGAGATACAAGAAA
CACACCTACCAGCCCAAATAACAACCACCACCGAAGACCCAACAACCCTA
TTCCCAACCACCACTCTCGCAACAATCACCACCCACACCACCACCACAAC
AACAACAACCACCCACCCACACAACATCCACACCCATACCACCCACATCC
ACCCCCAACCAACAACCCACTCCATCCCGCACAAACTCTGGCAAAAAACC
GGCTCCAAAGGCCTCTCCCCCCAAGCCGAATCCTGGATCTCCACCTGGAC
AGCCCTAAACCCTCACCTCCGCCACGAAGTCCTCACCGATTCATCCGGCC
TCGCCTACGTGGAAACGAACTTCCGCCCCATCTGGCCCGAAATCGCCGAC
CTATACACATCCCTCAGCGTGCCCATCCTCCGCGCCGACCTCCTTCGACT
CCTCATCCTCTACATCGACGGCGGCATCTGGTCCGACCTCGATGTATCCT
GCGAAGTGCCCATCTCGCAATGGCCTATTCCCCCGGCAGCCAACGTGGTC
GTGGGGATAGAGTTCGACGGATGGCAGTTCGCCTCGTGGACGGTGCTTTC
CACACCGGGCAATAACCATATCTATCATGCGATTGAGTATGTAGCTGGAA
GACTGGAGGCATTGGCGCAGGCGAACAATGTCACCGTTGGGGAGGTGACT
ATGGAGATGATTCCGGATGTGGTGGATGTGACGGGGCCGCAGGCTATTAC
TATGGCGTTTTTGGAGACGATTAGTGAGAGTGTTGGGAGACGGGTGGGTA
AGGATGAGGTCGAGGGGTTGGGAGAGGGGGGAGTGTTGCTTGGGGATGTG
TTGGTTTTGCCGCAGGCGAGCTTTGCGGCGTTGCAGGGGGGGATGCCCAC
GGGGCAGGGGGAGTATTTGGTGAGTCATCATTATGCGGGGAGTTGGAAGA
ATGAGGTGGGTGGGGAGGAGGGGGTAAAAGAGGAGGAAGAGGAGGACGGG
GATGAGGAGGTTGTGATTGTTGTGGAGGGAGAGGATGGGGATGGAGATGG
GAATGGGGGAGAGGGTGAGGGGAGTGAGTGATAGGGTTGTTACTAGGAGC
TGGGGATGATGTATATATTGTATGTATGTTTCACTTTTTGTATATAGTTA
GGGTATGCTATGCTATGCTGTGCATTCTAACTTTCACGGTGTGTTGGACT
G
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Coding sequence (CDS) from alignment at ch2:2167599..2169499+

>KJC3_002283-T1 ID=KJC3_002283-T1|Name=KJC3_002283-T1|organism=Aspergillus niger KJC3|type=CDS|length=1188bp|location=Sequence derived from alignment at ch2:2167599..2169499+ (Aspergillus niger KJC3)
ATGTCCACCATGTTAACCCGACCCACCGCCATCCTCATCTTCTCCCTCGT
CTTCCTCAACCTCTACCTCTTCCACCGACTCATCCGCCAACCCGTCGTGC
CACTCTCACCCACCATCGTCCCAACCCCAAGCCCAGCGGCAGCAGAGATA
CAAGAAACACACCTACCAGCCCAAATAACAACCACCACCGAAGACCCAAC
AACCCTATTCCCAACCACCACTCTCGCAACAATCACCACCCACACCACCA
CCACAACAACAACAACCACCCACCCACACAACATCCACACCCATACCACC
CACATCCACCCCCAACCAACAACCCACTCCATCCCGCACAAACTCTGGCA
AAAAACCGGCTCCAAAGGCCTCTCCCCCCAAGCCGAATCCTGGATCTCCA
CCTGGACAGCCCTAAACCCTCACCTCCGCCACGAAGTCCTCACCGATTCA
TCCGGCCTCGCCTACGTGGAAACGAACTTCCGCCCCATCTGGCCCGAAAT
CGCCGACCTATACACATCCCTCAGCGTGCCCATCCTCCGCGCCGACCTCC
TTCGACTCCTCATCCTCTACATCGACGGCGGCATCTGGTCCGACCTCGAT
GTATCCTGCGAAGTGCCCATCTCGCAATGGCCTATTCCCCCGGCAGCCAA
CGTGGTCGTGGGGATAGAGTTCGACGGATGGCAGTTCGCCTCGTGGACGG
TGCTTTCCACACCGGGCAATAACCATATCTATCATGCGATTGAGTATGTA
GCTGGAAGACTGGAGGCATTGGCGCAGGCGAACAATGTCACCGTTGGGGA
GGTGACTATGGAGATGATTCCGGATGTGGTGGATGTGACGGGGCCGCAGG
CTATTACTATGGCGTTTTTGGAGACGATTAGTGAGAGTGTTGGGAGACGG
GTGGGTAAGGATGAGGTCGAGGGGTTGGGAGAGGGGGGAGTGTTGCTTGG
GGATGTGTTGGTTTTGCCGCAGGCGAGCTTTGCGGCGTTGCAGGGGGGGA
TGCCCACGGGGCAGGGGGAGTATTTGGTGAGTCATCATTATGCGGGGAGT
TGGAAGAATGAGGTGGGTGGGGAGGAGGGGGTAAAAGAGGAGGAAGAGGA
GGACGGGGATGAGGAGGTTGTGATTGTTGTGGAGGGAGAGGATGGGGATG
GAGATGGGAATGGGGGAGAGGGTGAGGGGAGTGAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002283KJC3_002283Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002283-T1.utr5p1KJC3_002283-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002283-T1.exon1KJC3_002283-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002283-T1.cdsKJC3_002283-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002283-T1.utr3p1KJC3_002283-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002283-T1KJC3_002283-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029044
DBxrefInterPro:IPR007577
DBxrefPFAM:PF04488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2167599..2169499 +
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