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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2203780..2205641- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002297-T1 ID=KJC3_002297-T1|Name=KJC3_002297-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1862bp|location=Sequence derived from alignment at ch2:2203780..2205641- (Aspergillus niger KJC3)
TCCTTATCTAATGCTGTCTTGAAGACGTACGACTAGCTCCGGGCCTTTTC
ATCGTTTAATTTCGCATCTGTTCAATTAATTACTGGCACACCAACATGGC
CTCAAACGGCGGGTCGTCCGTCGCTCAGCTCTGGCAAGATGCGATCGCGG
AATACGAAAATGCGACCGGCAAAAACCTTCGCCTGGGCCAATTCAAGAGC
ATGGACGAGGTGATGGCAGGAACAGAGGGCTTATCGAACAACTTTAGCAA
TTTCCGTTCCGACAAGTCCAAAGTAAGCAAGATGAGGACGGCGTTCAAAA
ACAACATGTGGTTGATTCAGGATATTGTCAACACCATACAATCTGTTGGC
AATGCTGCATCGGTATGATATATTCCCACATCCAACAAGAAGTAAATCAT
CTCAGTCCTTACTCTCTTTAGATATTTCCCCCTGCAATGCCAGCTACTTT
GATCTTCTCAGCGTTCGGGCAGGTCATGCAGTCGTTTTCCACGGTCTCTG
CCGACTATGACACTGTTATGGGGTTCTTTGAATTCACCCATCGGTTCTTC
GACCGACTTTCGATTATCGACCAGAAGATGCCGGAATTACCTCCGTTTCA
AAGATGCATCAGCCGCGTCTTCTCTAGCATACTCAGGATTTGCGCCATCG
CGCAAAAGTATACCAAAGAGAAGCGGTTCAGTATGTTTCAACTGTCTATG
CTATCTCTTACACAAGCTTATGCAAGAAACAGAGAAATGGTTCGATAGTC
TCCTCAAGGGAAACGATGGCGAACTTGCCGCCGCCAGCGAGGAGTTAGAA
ACGGCCATCAACGAGATGAGCCAAGCCGTGGGGCTATCAACTTTGAAGAC
GGTCGATGTCATGAACAGAGTCGTCGACAGCATGAACGGGAACGTCGAGT
TCCTAGTCTCCAATGCCAACCTCATCGACGAAAGAACGGCAGCGATCCAA
TCAAACACGGATGCCATTCGCGAGCAGAACCGAGATATCGCATCAAAGCA
GGACGATATGACAGACATGCAGCGTGAGATGATGAGGCAGTTATCCGAGC
AGTCCAAGTTACTCAACCAAGCGGTAGGATTCTTCGATTCGCTTCAGATT
GGCGAAAGCTTTGGCAAGGAATACGAGACAAGCCTGCTGAAAGTCGATGT
GATCAAGCTGCGTCTCACTCGGTGGGGTAAATCCGTCGGATTAGCCAACT
TGGACGACCTGGGATCTGCTCGCGAGATCAAGCTCGCTCCTGAGGACATT
CCGAAGGTGCAAGATCTCCTCAATGAGATCCTGGAGCTAATTGCGGACGC
GGATAAGCTTTCGGGCCGCTTCAAGAAGAAGAATCCCGCGGCTCTGACCA
TGGATCCTTTTGTGGAACTGGACAATACAGCTGCCTCACTTCATCAGCAG
ATGGATTTGCTCGCCAAGGGACGACAGGGTAACTCGGCGGTCAACCCTGA
TGATGCTTTGATTATTTATCAGATGAAGGATTTCTCACGATTGATCGAAG
ACACCAATGGTCTGGTTGACGACTTAATCGAATTGTTCCCGGCTGTGCAG
GATGAGCAGCGCAAGATTTGTGAGGATGAGGTCTCGCGGTTGAAGAAGGT
CCAGAATGGCCTGCCGCTGCTGAAAAATGTTGCTGCTGGTCAGGATGATC
TTTTGCGTGATACTGTTGTGAAGGCTATCCAGTCTACAACCACCTACAAC
AATAGTGTTGTGTTCACGGGGGAGAACTACGGATTCCAGGTTGGGAATAA
CGTTGGCAGGATTGGCAATGTGCGATTCGGTCAGTACCAGTAGAACGTGC
TGTGATGCAATGATTGAATGAATTATCTGTATTAGAATTTGAAGTGAATG
CAGAATGGAAGC back to topCoding sequence (CDS) from alignment at ch2:2203780..2205641- >KJC3_002297-T1 ID=KJC3_002297-T1|Name=KJC3_002297-T1|organism=Aspergillus niger KJC3|type=CDS|length=4761bp|location=Sequence derived from alignment at ch2:2203780..2205641- (Aspergillus niger KJC3)
AGAAATGGTTCGATAGTCTCCTCAAGGGAAACGATGGCGAACTTGCCGCC
GCCAGCGAGGAGTTAGAAACGGCCATCAACGAGATGAGCCAAGCCGTGGG
GCTATCAACTTTGAAGACGGTCGATGTCATGAACAGAGTCGTCGACAGCA
TGAACGGGAACGTCGAGTTCCTAGTCTCCAATGCCAACCTCATCGACGAA
AGAACGGCAGCGATCCAATCAAACACGGATGCCATTCGCGAGCAGAACCG
AGATATCGCATCAAAGCAGGACGATATGACAGACATGCAGCGTGAGATGA
TGAGGCAGTTATCCGAGCAGTCCAAGTTACTCAACCAAGCGGTAGGATTC
TTCGATTCGCTTCAGATTGGCGAAAGCTTTGGCAAGGAATACGAGACAAG
CCTGCTGAAAGTCGATGTGATCAAGCTGCGTCTCACTCGGTGGGGTAAAT
CCGTCGGATTAGCCAACTTGGACGACCTGGGATCTGCTCGCGAGATCAAG
CTCGCTCCTGAGGACATTCCGAAGGTGCAAGATCTCCTCAATGAGATCCT
GGAGCTAATTGCGGACGCGGATAAGCTTTCGGGCCGCTTCAAGAAGAAGA
ATCCCGCGGCTCTGACCATGGATCCTTTTGTGGAACTGGACAATACAGCT
GCCTCACTTCATCAGCAGATGGATTTGCTCGCCAAGGGACGACAGGGTAA
CTCGGCGGTCAACCCTGATGATGCTTTGATTATTTATCAGATGAAGGATT
TCTCACGATTGATCGAAGACACCAATGGTCTGGTTGACGACTTAATCGAA
TTGTTCCCGGCTGTGCAGGATGAGCAGCGCAAGATTTGTGAGGATGAGGT
CTCGCGGTTGAAGAAGGTCCAGAATGGCCTGCCGCTGCTGAAAAATGTTG
CTGCTGGTCAGGATGATCTTTTGCGTGATACTGTTGTGAAGGCTATCCAG
TCTACAACCACCTACAACAATAGTGTTGTGTTCACGGGGGAGAACTACGG
ATTCCAGGTTGGGAATAACGTTGGCAGGATTGGCAATGTGCGATTCGGTC
AGTACCAGTAGATATTTCCCCCTGCAATGCCAGCTACTTTGATCTTCTCA
GCGTTCGGGCAGGTCATGCAGTCGTTTTCCACGGTCTCTGCCGACTATGA
CACTGTTATGGGGTTCTTTGAATTCACCCATCGGTTCTTCGACCGACTTT
CGATTATCGACCAGAAGATGCCGGAATTACCTCCGTTTCAAAGATGCATC
AGCCGCGTCTTCTCTAGCATACTCAGGATTTGCGCCATCGCGCAAAAGTA
TACCAAAGAGAAGCGGTTCAATGGCCTCAAACGGCGGGTCGTCCGTCGCT
CAGCTCTGGCAAGATGCGATCGCGGAATACGAAAATGCGACCGGCAAAAA
CCTTCGCCTGGGCCAATTCAAGAGCATGGACGAGGTGATGGCAGGAACAG
AGGGCTTATCGAACAACTTTAGCAATTTCCGTTCCGACAAGTCCAAAGTA
AGCAAGATGAGGACGGCGTTCAAAAACAACATGTGGTTGATTCAGGATAT
TGTCAACACCATACAATCTGTTGGCAATGCTGCATCGAGAAATGGTTCGA
TAGTCTCCTCAAGGGAAACGATGGCGAACTTGCCGCCGCCAGCGAGGAGT
TAGAAACGGCCATCAACGAGATGAGCCAAGCCGTGGGGCTATCAACTTTG
AAGACGGTCGATGTCATGAACAGAGTCGTCGACAGCATGAACGGGAACGT
CGAGTTCCTAGTCTCCAATGCCAACCTCATCGACGAAAGAACGGCAGCGA
TCCAATCAAACACGGATGCCATTCGCGAGCAGAACCGAGATATCGCATCA
AAGCAGGACGATATGACAGACATGCAGCGTGAGATGATGAGGCAGTTATC
CGAGCAGTCCAAGTTACTCAACCAAGCGGTAGGATTCTTCGATTCGCTTC
AGATTGGCGAAAGCTTTGGCAAGGAATACGAGACAAGCCTGCTGAAAGTC
GATGTGATCAAGCTGCGTCTCACTCGGTGGGGTAAATCCGTCGGATTAGC
CAACTTGGACGACCTGGGATCTGCTCGCGAGATCAAGCTCGCTCCTGAGG
ACATTCCGAAGGTGCAAGATCTCCTCAATGAGATCCTGGAGCTAATTGCG
GACGCGGATAAGCTTTCGGGCCGCTTCAAGAAGAAGAATCCCGCGGCTCT
GACCATGGATCCTTTTGTGGAACTGGACAATACAGCTGCCTCACTTCATC
AGCAGATGGATTTGCTCGCCAAGGGACGACAGGGTAACTCGGCGGTCAAC
CCTGATGATGCTTTGATTATTTATCAGATGAAGGATTTCTCACGATTGAT
CGAAGACACCAATGGTCTGGTTGACGACTTAATCGAATTGTTCCCGGCTG
TGCAGGATGAGCAGCGCAAGATTTGTGAGGATGAGGTCTCGCGGTTGAAG
AAGGTCCAGAATGGCCTGCCGCTGCTGAAAAATGTTGCTGCTGGTCAGGA
TGATCTTTTGCGTGATACTGTTGTGAAGGCTATCCAGTCTACAACCACCT
ACAACAATAGTGTTGTGTTCACGGGGGAGAACTACGGATTCCAGGTTGGG
AATAACGTTGGCAGGATTGGCAATGTGCGATTCGGTCAGTACCAGTAGAT
ATTTCCCCCTGCAATGCCAGCTACTTTGATCTTCTCAGCGTTCGGGCAGG
TCATGCAGTCGTTTTCCACGGTCTCTGCCGACTATGACACTGTTATGGGG
TTCTTTGAATTCACCCATCGGTTCTTCGACCGACTTTCGATTATCGACCA
GAAGATGCCGGAATTACCTCCGTTTCAAAGATGCATCAGCCGCGTCTTCT
CTAGCATACTCAGGATTTGCGCCATCGCGCAAAAGTATACCAAAGAGAAG
CGGTTCAATGGCCTCAAACGGCGGGTCGTCCGTCGCTCAGCTCTGGCAAG
ATGCGATCGCGGAATACGAAAATGCGACCGGCAAAAACCTTCGCCTGGGC
CAATTCAAGAGCATGGACGAGGTGATGGCAGGAACAGAGGGCTTATCGAA
CAACTTTAGCAATTTCCGTTCCGACAAGTCCAAAGTAAGCAAGATGAGGA
CGGCGTTCAAAAACAACATGTGGTTGATTCAGGATATTGTCAACACCATA
CAATCTGTTGGCAATGCTGCATCGAGAAATGGTTCGATAGTCTCCTCAAG
GGAAACGATGGCGAACTTGCCGCCGCCAGCGAGGAGTTAGAAACGGCCAT
CAACGAGATGAGCCAAGCCGTGGGGCTATCAACTTTGAAGACGGTCGATG
TCATGAACAGAGTCGTCGACAGCATGAACGGGAACGTCGAGTTCCTAGTC
TCCAATGCCAACCTCATCGACGAAAGAACGGCAGCGATCCAATCAAACAC
GGATGCCATTCGCGAGCAGAACCGAGATATCGCATCAAAGCAGGACGATA
TGACAGACATGCAGCGTGAGATGATGAGGCAGTTATCCGAGCAGTCCAAG
TTACTCAACCAAGCGGTAGGATTCTTCGATTCGCTTCAGATTGGCGAAAG
CTTTGGCAAGGAATACGAGACAAGCCTGCTGAAAGTCGATGTGATCAAGC
TGCGTCTCACTCGGTGGGGTAAATCCGTCGGATTAGCCAACTTGGACGAC
CTGGGATCTGCTCGCGAGATCAAGCTCGCTCCTGAGGACATTCCGAAGGT
GCAAGATCTCCTCAATGAGATCCTGGAGCTAATTGCGGACGCGGATAAGC
TTTCGGGCCGCTTCAAGAAGAAGAATCCCGCGGCTCTGACCATGGATCCT
TTTGTGGAACTGGACAATACAGCTGCCTCACTTCATCAGCAGATGGATTT
GCTCGCCAAGGGACGACAGGGTAACTCGGCGGTCAACCCTGATGATGCTT
TGATTATTTATCAGATGAAGGATTTCTCACGATTGATCGAAGACACCAAT
GGTCTGGTTGACGACTTAATCGAATTGTTCCCGGCTGTGCAGGATGAGCA
GCGCAAGATTTGTGAGGATGAGGTCTCGCGGTTGAAGAAGGTCCAGAATG
GCCTGCCGCTGCTGAAAAATGTTGCTGCTGGTCAGGATGATCTTTTGCGT
GATACTGTTGTGAAGGCTATCCAGTCTACAACCACCTACAACAATAGTGT
TGTGTTCACGGGGGAGAACTACGGATTCCAGGTTGGGAATAACGTTGGCA
GGATTGGCAATGTGCGATTCGGTCAGTACCAGTAGATATTTCCCCCTGCA
ATGCCAGCTACTTTGATCTTCTCAGCGTTCGGGCAGGTCATGCAGTCGTT
TTCCACGGTCTCTGCCGACTATGACACTGTTATGGGGTTCTTTGAATTCA
CCCATCGGTTCTTCGACCGACTTTCGATTATCGACCAGAAGATGCCGGAA
TTACCTCCGTTTCAAAGATGCATCAGCCGCGTCTTCTCTAGCATACTCAG
GATTTGCGCCATCGCGCAAAAGTATACCAAAGAGAAGCGGTTCAATGGCC
TCAAACGGCGGGTCGTCCGTCGCTCAGCTCTGGCAAGATGCGATCGCGGA
ATACGAAAATGCGACCGGCAAAAACCTTCGCCTGGGCCAATTCAAGAGCA
TGGACGAGGTGATGGCAGGAACAGAGGGCTTATCGAACAACTTTAGCAAT
TTCCGTTCCGACAAGTCCAAAGTAAGCAAGATGAGGACGGCGTTCAAAAA
CAACATGTGGTTGATTCAGGATATTGTCAACACCATACAATCTGTTGGCA
ATGCTGCATCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002297-T1.utr3p1 | KJC3_002297-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002297-T1.utr5p1 | KJC3_002297-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.6 |
| DBxref | InterPro:IPR031469 |
| DBxref | InterPro:IPR038305 |
| DBxref | InterPro:IPR029498 |
| DBxref | InterPro:IPR031350 |
| DBxref | PFAM:PF17046 |
| DBxref | PFAM:PF14479 |
| DBxref | PFAM:PF17109 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2203780..2205641 - |
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