|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2218304..2220654- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002303-T2 ID=KJC3_002303-T2|Name=KJC3_002303-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2351bp|location=Sequence derived from alignment at ch2:2218304..2220654- (Aspergillus niger KJC3)
CTCGTCTCTTATATGAAACACGCCACTTACAAGTGGACTCCGACAACCCT
TGACCTTTCGTGCCTTTAGGTCCACGGGAAAGCAATGACACAACCACCGA
TATCCTCTCTGATCCGACGATATAGTATGAAAGCAGAGCACGAGACGCCC
CACAATCCGCTCGCTCAGGCTTTAAGCTCTACGATCAAACACCAAGATGA
ATTAGAAAGGCAGTCCCAGCGCCAGGCCGAAGAATGGACCAAATGGCTCA
AGTTCGGGGAAGCTACAGAGTGAGGCAGATCATCTACTCTGGCAAGCATT
TGTAAAGCGGTGTCATGCTAAGTCTTGATCAATCACCAGCGATGCAGATT
TGAAGCGGTTAGAAGATGGTCGCAGGAGCATTGTGGAGATTTGGCAGCGA
TTTAGGGAGCACCATCATGAACTTCGACCAGTGGGCGCCGGCCAGCTCGT
CCCAGAGGTACCGAATATTACCACGTTGAGGAATATCGTCCAAGACGCCC
AAGTGGAATGGCAAGCCAAGAGAAGTAAAGGGTTGGGAAAGGTCAAAAGT
TATGTTGCAGACTTTTTGGAGATGATGGACGATCATTCTTACCTGTTCAA
ATTCATTCCGACCGGAGATAAATACATCAGCCTCATCACGGGTGTCGTAT
CGTCGGTTGTTAAGGTATGCATGCAGATCCGAAGAACATGAACTAGCCAT
GAGCTCAACACTTCTTCGAGTACTTAGATATGTGCCAATTATAAACGAAT
TGCTGAAGGGTTCTTTTCCGCCTTAGTGGACCTCAGCAGTGATGTGAGGC
TGGTCCAAAAGAAGACAGATATCTGGGACAGCCCGGACATGAGGGCTCTC
GTGGTTGACTACTACGTAATGGTCTTCGAATTTCTCTGCAACGCAATGTC
ATGGTTCAGTCGACCACGTCATCGATATCGCACGATCCTGGATAGGAGTT
CCTATGATCACGAAGTCAGGGACTTGGTCGATCGGATGAAATCGGCGGTA
GCACGGATCCGCGACGAAGCGGCACATCTCGCAGAGAAGCAGGTCTTGGG
AATCAACAGCAAGCTGGGCCAAGTTCTGGATATTGTCAGCCCACGGTCAA
CTGACGCCTCTGGTATTGATGTCTCGGGCAAATTTCTCTATCTTCACGTT
GTGGGGAGTGGGAGTCGTGGCGATAGCCGGGATGCGTCGCAGGCGAAGCT
CCATCACTTCGGTCAGCTTGTAGGAACATGTTCGCTGGAAACTCTGCAAG
AGATTGAAGAAAATGCAGAATACGGTAGGTTGGCCCATTCAGCCGCCCTG
GACTGGCAATCTAACCTGTGATCTAGTTCGGCAGTCGGCGACCATATGTG
AAAAGCCGGTGAGCCCGAGAGATGTTCAGCCGATGGATGTTCAGATTGCA
GAAGCCGAGACATTGAAAGATGAGTCAGACTCTGGTATATTTGCGAGAGT
CATTGCGTTTTATTGTGCCTTTCTGATGTATCATTCCAGACGGAGAGATG
ACTTGCACGCGCTACGACATTCACAAAGCCACGATGTCCCTCGCAGAATA
CACAGAGGATGGCAGAGAAGAGCTTTCCAATGCGCTCCGGGGAAACCCAT
CTTCTCTGCTTCCACAGGAAGTATTGAGTGAGATCCAGAACTGGGTGCGG
AGCCCCCAATCCAAGATGATCTGGATAGAGGGGGATCCTTTGTCCTCTTA
TGGTTCCAATCTCTCCTTGGCAGCCATGCAGCTGTGCGCAATTAGCACAA
GGGCACATATTCCCTGTATCTCATTCTTCTGTAAGCCAAGGTATAATTTT
GTCAAGCATTTTTCAAGTCAAGAAGCCTCTGTCATCGCGTTGTTGTACAC
CATCATCGCACAACTTACCCGTCTACTTCCCGCAGACTTCCACGGCGCTC
CGATACTCCTGGGGCAGTTTGAACTTCTTGACGGGGCGATAGGAACTGCC
TCCACTGCATTGAACATAATCAGAGAGCTCTTGGTGCATGCACCGCCATC
AATTATTTGGGTCATTGATGGACTTCATCTGGCAGAGAACAGCAGTACCA
TTCACATCCTTGACGACTTTGTGGCCATACTGCGTGAGCAGGAGAGGTTC
CGGCTATCTAAGGTATGCTTTACGACTGATGGAAACAGTCATACCCTGTT
GCCGGCTATTATGGTGAATGAGCGAGTAGACGCCTCCCGAATGGCTCTAG
CAGGACCTAGAAGACACTTATATGGAGGGGGGGACATCTTTGCCGAGATG
AATAGTTGGTGATGTGTGTGATGGCTTGTTCCCATTTTGTATCATGAAGC
AAGGAAGTATCATTGACTAAAGGTATACTCTTCTTCCTTAAAAAAACAGT
G back to topCoding sequence (CDS) from alignment at ch2:2218304..2220654- >KJC3_002303-T2 ID=KJC3_002303-T2|Name=KJC3_002303-T2|organism=Aspergillus niger KJC3|type=CDS|length=3951bp|location=Sequence derived from alignment at ch2:2218304..2220654- (Aspergillus niger KJC3)
ACGGAGAGATGACTTGCACGCGCTACGACATTCACAAAGCCACGATGTCC
CTCGCAGAATACACAGAGGATGGCAGAGAAGAGCTTTCCAATGCGCTCCG
GGGAAACCCATCTTCTCTGCTTCCACAGGAAGTATTGAGTGAGATCCAGA
ACTGGGTGCGGAGCCCCCAATCCAAGATGATCTGGATAGAGGGGGATCCT
TTGTCCTCTTATGGTTCCAATCTCTCCTTGGCAGCCATGCAGCTGTGCGC
AATTAGCACAAGGGCACATATTCCCTGTATCTCATTCTTCTGTAAGCCAA
GGTATAATTTTGTCAAGCATTTTTCAAGTCAAGAAGCCTCTGTCATCGCG
TTGTTGTACACCATCATCGCACAACTTACCCGTCTACTTCCCGCAGACTT
CCACGGCGCTCCGATACTCCTGGGGCAGTTTGAACTTCTTGACGGGGCGA
TAGGAACTGCCTCCACTGCATTGAACATAATCAGAGAGCTCTTGGTGCAT
GCACCGCCATCAATTATTTGGGTCATTGATGGACTTCATCTGGCAGAGAA
CAGCAGTACCATTCACATCCTTGACGACTTTGTGGCCATACTGCGTGAGC
AGGAGAGGTTCCGGCTATCTAAGGTATGCTTTACGACTGATGGAAACAGT
CATACCCTGTTGCCGGCTATTATGGTGAATGAGCGAGTAGACGCCTCCCG
AATGGCTCTAGCAGGACCTAGAAGACACTTATATGGAGGGGGGGACATCT
TTGCCGAGATGAATAGTTGGTGATTCGGCAGTCGGCGACCATATGTGAAA
AGCCGGTGAGCCCGAGAGATGTTCAGCCGATGGATGTTCAGATTGCAGAA
GCCGAGACATTGAAAGATGAGTCAGACTCTGATGAGGGCTCTCGTGGTTG
ACTACTACGTAATGGTCTTCGAATTTCTCTGCAACGCAATGTCATGGTTC
AGTCGACCACGTCATCGATATCGCACGATCCTGGATAGGAGTTCCTATGA
TCACGAAGTCAGGGACTTGGTCGATCGGATGAAATCGGCGGTAGCACGGA
TCCGCGACGAAGCGGCACATCTCGCAGAGAAGCAGGTCTTGGGAATCAAC
AGCAAGCTGGGCCAAGTTCTGGATATTGTCAGCCCACGGTCAACTGACGC
CTCTGGTATTGATGTCTCGGGCAAATTTCTCTATCTTCACGTTGTGGGGA
GTGGGAGTCGTGGCGATAGCCGGGATGCGTCGCAGGCGAAGCTCCATCAC
TTCGGTCAGCTTGTAGGAACATGTTCGCTGGAAACTCTGCAAGAGATTGA
AGAAAATGCAGAATACGACGGAGAGATGACTTGCACGCGCTACGACATTC
ACAAAGCCACGATGTCCCTCGCAGAATACACAGAGGATGGCAGAGAAGAG
CTTTCCAATGCGCTCCGGGGAAACCCATCTTCTCTGCTTCCACAGGAAGT
ATTGAGTGAGATCCAGAACTGGGTGCGGAGCCCCCAATCCAAGATGATCT
GGATAGAGGGGGATCCTTTGTCCTCTTATGGTTCCAATCTCTCCTTGGCA
GCCATGCAGCTGTGCGCAATTAGCACAAGGGCACATATTCCCTGTATCTC
ATTCTTCTGTAAGCCAAGGTATAATTTTGTCAAGCATTTTTCAAGTCAAG
AAGCCTCTGTCATCGCGTTGTTGTACACCATCATCGCACAACTTACCCGT
CTACTTCCCGCAGACTTCCACGGCGCTCCGATACTCCTGGGGCAGTTTGA
ACTTCTTGACGGGGCGATAGGAACTGCCTCCACTGCATTGAACATAATCA
GAGAGCTCTTGGTGCATGCACCGCCATCAATTATTTGGGTCATTGATGGA
CTTCATCTGGCAGAGAACAGCAGTACCATTCACATCCTTGACGACTTTGT
GGCCATACTGCGTGAGCAGGAGAGGTTCCGGCTATCTAAGGTATGCTTTA
CGACTGATGGAAACAGTCATACCCTGTTGCCGGCTATTATGGTGAATGAG
CGAGTAGACGCCTCCCGAATGGCTCTAGCAGGACCTAGAAGACACTTATA
TGGAGGGGGGGACATCTTTGCCGAGATGAATAGTTGGTGATTCGGCAGTC
GGCGACCATATGTGAAAAGCCGGTGAGCCCGAGAGATGTTCAGCCGATGG
ATGTTCAGATTGCAGAAGCCGAGACATTGAAAGATGAGTCAGACTCTGAT
GAGGGCTCTCGTGGTTGACTACTACGTAATGGTCTTCGAATTTCTCTGCA
ACGCAATGTCATGGTTCAGTCGACCACGTCATCGATATCGCACGATCCTG
GATAGGAGTTCCTATGATCACGAAGTCAGGGACTTGGTCGATCGGATGAA
ATCGGCGGTAGCACGGATCCGCGACGAAGCGGCACATCTCGCAGAGAAGC
AGGTCTTGGGAATCAACAGCAAGCTGGGCCAAGTTCTGGATATTGTCAGC
CCACGGTCAACTGACGCCTCTGGTATTGATGTCTCGGGCAAATTTCTCTA
TCTTCACGTTGTGGGGAGTGGGAGTCGTGGCGATAGCCGGGATGCGTCGC
AGGCGAAGCTCCATCACTTCGGTCAGCTTGTAGGAACATGTTCGCTGGAA
ACTCTGCAAGAGATTGAAGAAAATGCAGAATACGACGGAGAGATGACTTG
CACGCGCTACGACATTCACAAAGCCACGATGTCCCTCGCAGAATACACAG
AGGATGGCAGAGAAGAGCTTTCCAATGCGCTCCGGGGAAACCCATCTTCT
CTGCTTCCACAGGAAGTATTGAGTGAGATCCAGAACTGGGTGCGGAGCCC
CCAATCCAAGATGATCTGGATAGAGGGGGATCCTTTGTCCTCTTATGGTT
CCAATCTCTCCTTGGCAGCCATGCAGCTGTGCGCAATTAGCACAAGGGCA
CATATTCCCTGTATCTCATTCTTCTGTAAGCCAAGGTATAATTTTGTCAA
GCATTTTTCAAGTCAAGAAGCCTCTGTCATCGCGTTGTTGTACACCATCA
TCGCACAACTTACCCGTCTACTTCCCGCAGACTTCCACGGCGCTCCGATA
CTCCTGGGGCAGTTTGAACTTCTTGACGGGGCGATAGGAACTGCCTCCAC
TGCATTGAACATAATCAGAGAGCTCTTGGTGCATGCACCGCCATCAATTA
TTTGGGTCATTGATGGACTTCATCTGGCAGAGAACAGCAGTACCATTCAC
ATCCTTGACGACTTTGTGGCCATACTGCGTGAGCAGGAGAGGTTCCGGCT
ATCTAAGGTATGCTTTACGACTGATGGAAACAGTCATACCCTGTTGCCGG
CTATTATGGTGAATGAGCGAGTAGACGCCTCCCGAATGGCTCTAGCAGGA
CCTAGAAGACACTTATATGGAGGGGGGGACATCTTTGCCGAGATGAATAG
TTGGTGATTCGGCAGTCGGCGACCATATGTGAAAAGCCGGTGAGCCCGAG
AGATGTTCAGCCGATGGATGTTCAGATTGCAGAAGCCGAGACATTGAAAG
ATGAGTCAGACTCTGATGAGGGCTCTCGTGGTTGACTACTACGTAATGGT
CTTCGAATTTCTCTGCAACGCAATGTCATGGTTCAGTCGACCACGTCATC
GATATCGCACGATCCTGGATAGGAGTTCCTATGATCACGAAGTCAGGGAC
TTGGTCGATCGGATGAAATCGGCGGTAGCACGGATCCGCGACGAAGCGGC
ACATCTCGCAGAGAAGCAGGTCTTGGGAATCAACAGCAAGCTGGGCCAAG
TTCTGGATATTGTCAGCCCACGGTCAACTGACGCCTCTGGTATTGATGTC
TCGGGCAAATTTCTCTATCTTCACGTTGTGGGGAGTGGGAGTCGTGGCGA
TAGCCGGGATGCGTCGCAGGCGAAGCTCCATCACTTCGGTCAGCTTGTAG
GAACATGTTCGCTGGAAACTCTGCAAGAGATTGAAGAAAATGCAGAATAC
G back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002303-T2.utr3p1 | KJC3_002303-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2218304..2220654 - |
|
