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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2218304..2220654- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002303-T3 ID=KJC3_002303-T3|Name=KJC3_002303-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2351bp|location=Sequence derived from alignment at ch2:2218304..2220654- (Aspergillus niger KJC3)
CTCGTCTCTTATATGAAACACGCCACTTACAAGTGGACTCCGACAACCCT
TGACCTTTCGTGCCTTTAGGTCCACGGGAAAGCAATGACACAACCACCGA
TATCCTCTCTGATCCGACGATATAGTATGAAAGCAGAGCACGAGACGCCC
CACAATCCGCTCGCTCAGGCTTTAAGCTCTACGATCAAACACCAAGATGA
ATTAGAAAGGCAGTCCCAGCGCCAGGCCGAAGAATGGACCAAATGGCTCA
AGTTCGGGGAAGCTACAGAGTGAGGCAGATCATCTACTCTGGCAAGCATT
TGTAAAGCGGTGTCATGCTAAGTCTTGATCAATCACCAGCGATGCAGATT
TGAAGCGGTTAGAAGATGGTCGCAGGAGCATTGTGGAGATTTGGCAGCGA
TTTAGGGAGCACCATCATGAACTTCGACCAGTGGGCGCCGGCCAGCTCGT
CCCAGAGGTACCGAATATTACCACGTTGAGGAATATCGTCCAAGACGCCC
AAGTGGAATGGCAAGCCAAGAGAAGTAAAGGGTTGGGAAAGGTCAAAAGT
TATGTTGCAGACTTTTTGGAGATGATGGACGATCATTCTTACCTGTTCAA
ATTCATTCCGACCGGAGATAAATACATCAGCCTCATCACGGGTGTCGTAT
CGTCGGTTGTTAAGGTATGCATGCAGATCCGAAGAACATGAACTAGCCAT
GAGCTCAACACTTCTTCGAGTACTTAGATATGTGCCAATTATAAACGAAT
TGCTGAAGGGTTCTTTTCCGCCTTAGTGGACCTCAGCAGTGATGTGAGGC
TGGTCCAAAAGAAGACAGATATCTGGGACAGCCCGGACATGAGGGCTCTC
GTGGTTGACTACTACGTAATGGTCTTCGAATTTCTCTGCAACGCAATGTC
ATGGTTCAGTCGACCACGTCATCGATATCGCACGATCCTGGATAGGAGTT
CCTATGATCACGAAGTCAGGGACTTGGTCGATCGGATGAAATCGGCGGTA
GCACGGATCCGCGACGAAGCGGCACATCTCGCAGAGAAGCAGGTCTTGGG
AATCAACAGCAAGCTGGGCCAAGTTCTGGATATTGTCAGCCCACGGTCAA
CTGACGCCTCTGGTATTGATGTCTCGGGCAAATTTCTCTATCTTCACGTT
GTGGGGAGTGGGAGTCGTGGCGATAGCCGGGATGCGTCGCAGGCGAAGCT
CCATCACTTCGGTCAGCTTGTAGGAACATGTTCGCTGGAAACTCTGCAAG
AGATTGAAGAAAATGCAGAATACGGTAGGTTGGCCCATTCAGCCGCCCTG
GACTGGCAATCTAACCTGTGATCTAGTTCGGCAGTCGGCGACCATATGTG
AAAAGCCGGTGAGCCCGAGAGATGTTCAGCCGATGGATGTTCAGATTGCA
GAAGCCGAGACATTGAAAGATGAGTCAGACTCTGGTATATTTGCGAGAGT
CATTGCGTTTTATTGTGCCTTTCTGATGTATCATTCCAGACGGAGAGATG
ACTTGCACGCGCTACGACATTCACAAAGCCACGATGTCCCTCGCAGAATA
CACAGAGGATGGCAGAGAAGAGCTTTCCAATGCGCTCCGGGGAAACCCAT
CTTCTCTGCTTCCACAGGAAGTATTGAGTGAGATCCAGAACTGGGTGCGG
AGCCCCCAATCCAAGATGATCTGGATAGAGGGGGATCCTTTGTCCTCTTA
TGGTTCCAATCTCTCCTTGGCAGCCATGCAGCTGTGCGCAATTAGCACAA
GGGCACATATTCCCTGTATCTCATTCTTCTGTAAGCCAAGGTATAATTTT
GTCAAGCATTTTTCAAGTCAAGAAGCCTCTGTCATCGCGTTGTTGTACAC
CATCATCGCACAACTTACCCGTCTACTTCCCGCAGACTTCCACGGCGCTC
CGATACTCCTGGGGCAGTTTGAACTTCTTGACGGGGCGATAGGAACTGCC
TCCACTGCATTGAACATAATCAGAGAGCTCTTGGTGCATGCACCGCCATC
AATTATTTGGGTCATTGATGGACTTCATCTGGCAGAGAACAGCAGTACCA
TTCACATCCTTGACGACTTTGTGGCCATACTGCGTGAGCAGGAGAGGTTC
CGGCTATCTAAGGTATGCTTTACGACTGATGGAAACAGTCATACCCTGTT
GCCGGCTATTATGGTGAATGAGCGAGTAGACGCCTCCCGAATGGCTCTAG
CAGGACCTAGAAGACACTTATATGGAGGGGGGGACATCTTTGCCGAGATG
AATAGTTGGTGATGTGTGTGATGGCTTGTTCCCATTTTGTATCATGAAGC
AAGGAAGTATCATTGACTAAAGGTATACTCTTCTTCCTTAAAAAAACAGT
G back to topCoding sequence (CDS) from alignment at ch2:2218304..2220654- >KJC3_002303-T3 ID=KJC3_002303-T3|Name=KJC3_002303-T3|organism=Aspergillus niger KJC3|type=CDS|length=6084bp|location=Sequence derived from alignment at ch2:2218304..2220654- (Aspergillus niger KJC3)
ACGGAGAGATGACTTGCACGCGCTACGACATTCACAAAGCCACGATGTCC
CTCGCAGAATACACAGAGGATGGCAGAGAAGAGCTTTCCAATGCGCTCCG
GGGAAACCCATCTTCTCTGCTTCCACAGGAAGTATTGAGTGAGATCCAGA
ACTGGGTGCGGAGCCCCCAATCCAAGATGATCTGGATAGAGGGGGATCCT
TTGTCCTCTTATGGTTCCAATCTCTCCTTGGCAGCCATGCAGCTGTGCGC
AATTAGCACAAGGGCACATATTCCCTGTATCTCATTCTTCTGTAAGCCAA
GGTATAATTTTGTCAAGCATTTTTCAAGTCAAGAAGCCTCTGTCATCGCG
TTGTTGTACACCATCATCGCACAACTTACCCGTCTACTTCCCGCAGACTT
CCACGGCGCTCCGATACTCCTGGGGCAGTTTGAACTTCTTGACGGGGCGA
TAGGAACTGCCTCCACTGCATTGAACATAATCAGAGAGCTCTTGGTGCAT
GCACCGCCATCAATTATTTGGGTCATTGATGGACTTCATCTGGCAGAGAA
CAGCAGTACCATTCACATCCTTGACGACTTTGTGGCCATACTGCGTGAGC
AGGAGAGGTTCCGGCTATCTAAGGTATGCTTTACGACTGATGGAAACAGT
CATACCCTGTTGCCGGCTATTATGGTGAATGAGCGAGTAGACGCCTCCCG
AATGGCTCTAGCAGGACCTAGAAGACACTTATATGGAGGGGGGGACATCT
TTGCCGAGATGAATAGTTGGTGATTCGGCAGTCGGCGACCATATGTGAAA
AGCCGGTGAGCCCGAGAGATGTTCAGCCGATGGATGTTCAGATTGCAGAA
GCCGAGACATTGAAAGATGAGTCAGACTCTGATATGTGCCAATTATAAAC
GAATTGCTGAAGGGTTCTTTTCCGCCTTAGTGGACCTCAGCAGTGATGTG
AGGCTGGTCCAAAAGAAGACAGATATCTGGGACAGCCCGGACATGAGGGC
TCTCGTGGTTGACTACTACGTAATGGTCTTCGAATTTCTCTGCAACGCAA
TGTCATGGTTCAGTCGACCACGTCATCGATATCGCACGATCCTGGATAGG
AGTTCCTATGATCACGAAGTCAGGGACTTGGTCGATCGGATGAAATCGGC
GGTAGCACGGATCCGCGACGAAGCGGCACATCTCGCAGAGAAGCAGGTCT
TGGGAATCAACAGCAAGCTGGGCCAAGTTCTGGATATTGTCAGCCCACGG
TCAACTGACGCCTCTGGTATTGATGTCTCGGGCAAATTTCTCTATCTTCA
CGTTGTGGGGAGTGGGAGTCGTGGCGATAGCCGGGATGCGTCGCAGGCGA
AGCTCCATCACTTCGGTCAGCTTGTAGGAACATGTTCGCTGGAAACTCTG
CAAGAGATTGAAGAAAATGCAGAATACGATGATGGACGATCATTCTTACC
TGTTCAAATTCATTCCGACCGGAGATAAATACATCAGCCTCATCACGGGT
GTCGTATCGTCGGTTGTTAAGACGGAGAGATGACTTGCACGCGCTACGAC
ATTCACAAAGCCACGATGTCCCTCGCAGAATACACAGAGGATGGCAGAGA
AGAGCTTTCCAATGCGCTCCGGGGAAACCCATCTTCTCTGCTTCCACAGG
AAGTATTGAGTGAGATCCAGAACTGGGTGCGGAGCCCCCAATCCAAGATG
ATCTGGATAGAGGGGGATCCTTTGTCCTCTTATGGTTCCAATCTCTCCTT
GGCAGCCATGCAGCTGTGCGCAATTAGCACAAGGGCACATATTCCCTGTA
TCTCATTCTTCTGTAAGCCAAGGTATAATTTTGTCAAGCATTTTTCAAGT
CAAGAAGCCTCTGTCATCGCGTTGTTGTACACCATCATCGCACAACTTAC
CCGTCTACTTCCCGCAGACTTCCACGGCGCTCCGATACTCCTGGGGCAGT
TTGAACTTCTTGACGGGGCGATAGGAACTGCCTCCACTGCATTGAACATA
ATCAGAGAGCTCTTGGTGCATGCACCGCCATCAATTATTTGGGTCATTGA
TGGACTTCATCTGGCAGAGAACAGCAGTACCATTCACATCCTTGACGACT
TTGTGGCCATACTGCGTGAGCAGGAGAGGTTCCGGCTATCTAAGGTATGC
TTTACGACTGATGGAAACAGTCATACCCTGTTGCCGGCTATTATGGTGAA
TGAGCGAGTAGACGCCTCCCGAATGGCTCTAGCAGGACCTAGAAGACACT
TATATGGAGGGGGGGACATCTTTGCCGAGATGAATAGTTGGTGATTCGGC
AGTCGGCGACCATATGTGAAAAGCCGGTGAGCCCGAGAGATGTTCAGCCG
ATGGATGTTCAGATTGCAGAAGCCGAGACATTGAAAGATGAGTCAGACTC
TGATATGTGCCAATTATAAACGAATTGCTGAAGGGTTCTTTTCCGCCTTA
GTGGACCTCAGCAGTGATGTGAGGCTGGTCCAAAAGAAGACAGATATCTG
GGACAGCCCGGACATGAGGGCTCTCGTGGTTGACTACTACGTAATGGTCT
TCGAATTTCTCTGCAACGCAATGTCATGGTTCAGTCGACCACGTCATCGA
TATCGCACGATCCTGGATAGGAGTTCCTATGATCACGAAGTCAGGGACTT
GGTCGATCGGATGAAATCGGCGGTAGCACGGATCCGCGACGAAGCGGCAC
ATCTCGCAGAGAAGCAGGTCTTGGGAATCAACAGCAAGCTGGGCCAAGTT
CTGGATATTGTCAGCCCACGGTCAACTGACGCCTCTGGTATTGATGTCTC
GGGCAAATTTCTCTATCTTCACGTTGTGGGGAGTGGGAGTCGTGGCGATA
GCCGGGATGCGTCGCAGGCGAAGCTCCATCACTTCGGTCAGCTTGTAGGA
ACATGTTCGCTGGAAACTCTGCAAGAGATTGAAGAAAATGCAGAATACGA
TGATGGACGATCATTCTTACCTGTTCAAATTCATTCCGACCGGAGATAAA
TACATCAGCCTCATCACGGGTGTCGTATCGTCGGTTGTTAAGACGGAGAG
ATGACTTGCACGCGCTACGACATTCACAAAGCCACGATGTCCCTCGCAGA
ATACACAGAGGATGGCAGAGAAGAGCTTTCCAATGCGCTCCGGGGAAACC
CATCTTCTCTGCTTCCACAGGAAGTATTGAGTGAGATCCAGAACTGGGTG
CGGAGCCCCCAATCCAAGATGATCTGGATAGAGGGGGATCCTTTGTCCTC
TTATGGTTCCAATCTCTCCTTGGCAGCCATGCAGCTGTGCGCAATTAGCA
CAAGGGCACATATTCCCTGTATCTCATTCTTCTGTAAGCCAAGGTATAAT
TTTGTCAAGCATTTTTCAAGTCAAGAAGCCTCTGTCATCGCGTTGTTGTA
CACCATCATCGCACAACTTACCCGTCTACTTCCCGCAGACTTCCACGGCG
CTCCGATACTCCTGGGGCAGTTTGAACTTCTTGACGGGGCGATAGGAACT
GCCTCCACTGCATTGAACATAATCAGAGAGCTCTTGGTGCATGCACCGCC
ATCAATTATTTGGGTCATTGATGGACTTCATCTGGCAGAGAACAGCAGTA
CCATTCACATCCTTGACGACTTTGTGGCCATACTGCGTGAGCAGGAGAGG
TTCCGGCTATCTAAGGTATGCTTTACGACTGATGGAAACAGTCATACCCT
GTTGCCGGCTATTATGGTGAATGAGCGAGTAGACGCCTCCCGAATGGCTC
TAGCAGGACCTAGAAGACACTTATATGGAGGGGGGGACATCTTTGCCGAG
ATGAATAGTTGGTGATTCGGCAGTCGGCGACCATATGTGAAAAGCCGGTG
AGCCCGAGAGATGTTCAGCCGATGGATGTTCAGATTGCAGAAGCCGAGAC
ATTGAAAGATGAGTCAGACTCTGATATGTGCCAATTATAAACGAATTGCT
GAAGGGTTCTTTTCCGCCTTAGTGGACCTCAGCAGTGATGTGAGGCTGGT
CCAAAAGAAGACAGATATCTGGGACAGCCCGGACATGAGGGCTCTCGTGG
TTGACTACTACGTAATGGTCTTCGAATTTCTCTGCAACGCAATGTCATGG
TTCAGTCGACCACGTCATCGATATCGCACGATCCTGGATAGGAGTTCCTA
TGATCACGAAGTCAGGGACTTGGTCGATCGGATGAAATCGGCGGTAGCAC
GGATCCGCGACGAAGCGGCACATCTCGCAGAGAAGCAGGTCTTGGGAATC
AACAGCAAGCTGGGCCAAGTTCTGGATATTGTCAGCCCACGGTCAACTGA
CGCCTCTGGTATTGATGTCTCGGGCAAATTTCTCTATCTTCACGTTGTGG
GGAGTGGGAGTCGTGGCGATAGCCGGGATGCGTCGCAGGCGAAGCTCCAT
CACTTCGGTCAGCTTGTAGGAACATGTTCGCTGGAAACTCTGCAAGAGAT
TGAAGAAAATGCAGAATACGATGATGGACGATCATTCTTACCTGTTCAAA
TTCATTCCGACCGGAGATAAATACATCAGCCTCATCACGGGTGTCGTATC
GTCGGTTGTTAAGACGGAGAGATGACTTGCACGCGCTACGACATTCACAA
AGCCACGATGTCCCTCGCAGAATACACAGAGGATGGCAGAGAAGAGCTTT
CCAATGCGCTCCGGGGAAACCCATCTTCTCTGCTTCCACAGGAAGTATTG
AGTGAGATCCAGAACTGGGTGCGGAGCCCCCAATCCAAGATGATCTGGAT
AGAGGGGGATCCTTTGTCCTCTTATGGTTCCAATCTCTCCTTGGCAGCCA
TGCAGCTGTGCGCAATTAGCACAAGGGCACATATTCCCTGTATCTCATTC
TTCTGTAAGCCAAGGTATAATTTTGTCAAGCATTTTTCAAGTCAAGAAGC
CTCTGTCATCGCGTTGTTGTACACCATCATCGCACAACTTACCCGTCTAC
TTCCCGCAGACTTCCACGGCGCTCCGATACTCCTGGGGCAGTTTGAACTT
CTTGACGGGGCGATAGGAACTGCCTCCACTGCATTGAACATAATCAGAGA
GCTCTTGGTGCATGCACCGCCATCAATTATTTGGGTCATTGATGGACTTC
ATCTGGCAGAGAACAGCAGTACCATTCACATCCTTGACGACTTTGTGGCC
ATACTGCGTGAGCAGGAGAGGTTCCGGCTATCTAAGGTATGCTTTACGAC
TGATGGAAACAGTCATACCCTGTTGCCGGCTATTATGGTGAATGAGCGAG
TAGACGCCTCCCGAATGGCTCTAGCAGGACCTAGAAGACACTTATATGGA
GGGGGGGACATCTTTGCCGAGATGAATAGTTGGTGATTCGGCAGTCGGCG
ACCATATGTGAAAAGCCGGTGAGCCCGAGAGATGTTCAGCCGATGGATGT
TCAGATTGCAGAAGCCGAGACATTGAAAGATGAGTCAGACTCTGATATGT
GCCAATTATAAACGAATTGCTGAAGGGTTCTTTTCCGCCTTAGTGGACCT
CAGCAGTGATGTGAGGCTGGTCCAAAAGAAGACAGATATCTGGGACAGCC
CGGACATGAGGGCTCTCGTGGTTGACTACTACGTAATGGTCTTCGAATTT
CTCTGCAACGCAATGTCATGGTTCAGTCGACCACGTCATCGATATCGCAC
GATCCTGGATAGGAGTTCCTATGATCACGAAGTCAGGGACTTGGTCGATC
GGATGAAATCGGCGGTAGCACGGATCCGCGACGAAGCGGCACATCTCGCA
GAGAAGCAGGTCTTGGGAATCAACAGCAAGCTGGGCCAAGTTCTGGATAT
TGTCAGCCCACGGTCAACTGACGCCTCTGGTATTGATGTCTCGGGCAAAT
TTCTCTATCTTCACGTTGTGGGGAGTGGGAGTCGTGGCGATAGCCGGGAT
GCGTCGCAGGCGAAGCTCCATCACTTCGGTCAGCTTGTAGGAACATGTTC
GCTGGAAACTCTGCAAGAGATTGAAGAAAATGCAGAATACGATGATGGAC
GATCATTCTTACCTGTTCAAATTCATTCCGACCGGAGATAAATACATCAG
CCTCATCACGGGTGTCGTATCGTCGGTTGTTAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002303-T3.utr3p1 | KJC3_002303-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002303-T3.utr5p1 | KJC3_002303-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2218304..2220654 - |
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